You are here

Home

CAN33_15685-T1, CAN33_15685-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_15685-T1
Unique NameCAN33_15685-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:2241821..2243114+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_15685-T1 ID=CAN33_15685-T1|Name=CAN33_15685-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1294bp|location=Sequence derived from alignment at NKJJ01000010.1:2241821..2243114+ (Aspergillus niger FDAARGOS_311)
ATGGCCAACAAGGTATTTGCAGTGACGGGTATGATTCCTCTGACTCTTGC
ACCCCAGTATTGCAAGATATTCGCTCCCCGATCCAGTGCTCACACTCTAC
AGTGTTCTTCATCTGCTTTCGTGAATGTCTCGAGAGTGTCATTATCGTGT
CCGTGCTTCTGTCTTTCCTGAAGCAGACACTAGGAGGAGAAGGCGATGTA
AAAACATTAAAACGATTAAATCGACATGTACGTTTCCTTCCCCATACAGA
CGTCTTTTCTTCCCTCTTACACGATCCAGGTATGGTGTGGTGTGGCATTA
GGTCTTTTCATATGTCTCTGCGTCGGTGGTGGTATGATTGGTGCCTTCTA
CGGCCTCAACAAGGATGTCTTCACCGGTAGTGAGGATATCTGGGAAGGTA
TCTTCGGTTTCATCGCTTCTATCATTATCAGTATCATGGGTGCTGGTCTT
CTGCGCGTCTCCAAGCTGCAGGACAAGTGGCGCGACAAGCTGGCCCAGGC
TCTCGAAGAGAAAGAGAAGACCAAGATCGGTATCTACCAGCGGTTCAAAG
ACTGGTCCAAGAAATATGTCATGTTCCTTCTTCCGTTCGTGACTGTTCTT
CGTGAGGGTCTTGAAGCCGTCGTGTATGTTGGTGGTGTTGGTCTTGGTCT
CCCTGCGACTTCGTTCCCTCTCGCCGTCGTTTGTGGTCTTGCTGCTGGTA
TTGCTGTCGGATACCTTCTTTACAGGTTAGTTACTTCCCTCGTGTTGAGA
GGTTCTTGCAGCGCGGACTAACGTCCTCACCTTAACTAGATGTGGTAACA
CCGCCTCTCTGCAATATTTCCTGATCATCTCGACCTGCTTCCTTTACCTT
GTCTCCGCTGGTCTCTTCTCCCGTGCCATCTGGTACCTCCAGAACAACGC
CTGGAACAACATCATCGGCGGTGACGCCTCCGAAACGGGTTCTGGAGCCG
GTTCTTACGATATTCGCCAGAGTGTCTGGCACGTCAACTGCTGCAACCCC
GAACTGGGTAGCGGTGGTGGATGGGGTATCTTCAACGCTCTTTTCGGTTG
GACCAACTCTGCCACATATGGATCCGTGCTGGGATACAACCTGTACTGGA
TCTGCATTATCACCGGCTACGTTTTCATGTGGTACAATGAGCGCTACGGA
TACATCCCGTTCTTCTCGGCCTGCATGCGCAGAATCCGGCCAGGAAAAGC
TGCCAGCCGGTCCAGCAGTGAGGGGGTGATTGAGAAGAGCAAGGAGGTCG
ATATGATGCCCTCGCAGATTATTACCAGAGAAGTCAACGCCTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000010.1:2241821..2243114+

>CAN33_15685-T1 ID=CAN33_15685-T1|Name=CAN33_15685-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4416bp|location=Sequence derived from alignment at NKJJ01000010.1:2241821..2243114+ (Aspergillus niger FDAARGOS_311)
ATGGCCAACAAGGTATTTGCAGTGACGGTGTTCTTCATCTGCTTTCGTGA
ATGTCTCGAGAGTGTCATTATCGTGTCCGTGCTTCTGTCTTTCCTGAAGC
AGACACTAGGAGGAGAAGGCGATGTAAAAACATTAAAACGATTAAATCGA
CATGTATGGTGTGGTGTGGCATTAGGTCTTTTCATATGTCTCTGCGTCGG
TGGTGGTATGATTGGTGCCTTCTACGGCCTCAACAAGGATGTCTTCACCG
GTAGTGAGGATATCTGGGAAGGTATCTTCGGTTTCATCGCTTCTATCATT
ATCAGTATCATGGGTGCTGGTCTTCTGCGCGTCTCCAAGCTGCAGGACAA
GTGGCGCGACAAGCTGGCCCAGGCTCTCGAAGAGAAAGAGAAGACCAAGA
TCGGTATCTACCAGCGGTTCAAAGACTGGTCCAAGAAATATGTCATGTTC
CTTCTTCCGTTCGTGACTGTTCTTCGTGAGGGTCTTGAAGCCGTCGTGTA
TGTTGGTGGTGTTGGTCTTGGTCTCCCTGCGACTTCGTTCCCTCTCGCCG
TCGTTTGTGGTCTTGCTGCTGGTATTGCTGTCGGATACCTTCTTTACAGA
TGTGGTAACACCGCCTCTCTGCAATATTTCCTGATCATCTCGACCTGCTT
CCTTTACCTTGTCTCCGCTGGTCTCTTCTCCCGTGCCATCTGGTACCTCC
AGAACAACGCCTGGAACAACATCATCGGCGGTGACGCCTCCGAAACGGGT
TCTGGAGCCGGTTCTTACGATATTCGCCAGAGTGTCTGGCACGTCAACTG
CTGCAACCCCGAACTGGGTAGCGGTGGTGGATGGGGTATCTTCAACGCTC
TTTTCGGTTGGACCAACTCTGCCACATATGGATCCGTGCTGGGATACAAC
CTGTACTGGATCTGCATTATCACCGGCTACGTTTTCATGTGGTACAATGA
GCGCTACGGATACATCCCGTTCTTCTCGGCCTGCATGCGCAGAATCCGGC
CAGGAAAAGCTGCCAGCCGGTCCAGCAGTGAGGGGGTGATTGAGAAGAGC
AAGGAGGTCGATATGATGCCCTCGCAGATTATTACCAGAGAAGTCAACGC
CTGAATGGCCAACAAGGTATTTGCAGTGACGGTGTTCTTCATCTGCTTTC
GTGAATGTCTCGAGAGTGTCATTATCGTGTCCGTGCTTCTGTCTTTCCTG
AAGCAGACACTAGGAGGAGAAGGCGATGTAAAAACATTAAAACGATTAAA
TCGACATGTATGGTGTGGTGTGGCATTAGGTCTTTTCATATGTCTCTGCG
TCGGTGGTGGTATGATTGGTGCCTTCTACGGCCTCAACAAGGATGTCTTC
ACCGGTAGTGAGGATATCTGGGAAGGTATCTTCGGTTTCATCGCTTCTAT
CATTATCAGTATCATGGGTGCTGGTCTTCTGCGCGTCTCCAAGCTGCAGG
ACAAGTGGCGCGACAAGCTGGCCCAGGCTCTCGAAGAGAAAGAGAAGACC
AAGATCGGTATCTACCAGCGGTTCAAAGACTGGTCCAAGAAATATGTCAT
GTTCCTTCTTCCGTTCGTGACTGTTCTTCGTGAGGGTCTTGAAGCCGTCG
TGTATGTTGGTGGTGTTGGTCTTGGTCTCCCTGCGACTTCGTTCCCTCTC
GCCGTCGTTTGTGGTCTTGCTGCTGGTATTGCTGTCGGATACCTTCTTTA
CAGATGTGGTAACACCGCCTCTCTGCAATATTTCCTGATCATCTCGACCT
GCTTCCTTTACCTTGTCTCCGCTGGTCTCTTCTCCCGTGCCATCTGGTAC
CTCCAGAACAACGCCTGGAACAACATCATCGGCGGTGACGCCTCCGAAAC
GGGTTCTGGAGCCGGTTCTTACGATATTCGCCAGAGTGTCTGGCACGTCA
ACTGCTGCAACCCCGAACTGGGTAGCGGTGGTGGATGGGGTATCTTCAAC
GCTCTTTTCGGTTGGACCAACTCTGCCACATATGGATCCGTGCTGGGATA
CAACCTGTACTGGATCTGCATTATCACCGGCTACGTTTTCATGTGGTACA
ATGAGCGCTACGGATACATCCCGTTCTTCTCGGCCTGCATGCGCAGAATC
CGGCCAGGAAAAGCTGCCAGCCGGTCCAGCAGTGAGGGGGTGATTGAGAA
GAGCAAGGAGGTCGATATGATGCCCTCGCAGATTATTACCAGAGAAGTCA
ACGCCTGAATGGCCAACAAGGTATTTGCAGTGACGGTGTTCTTCATCTGC
TTTCGTGAATGTCTCGAGAGTGTCATTATCGTGTCCGTGCTTCTGTCTTT
CCTGAAGCAGACACTAGGAGGAGAAGGCGATGTAAAAACATTAAAACGAT
TAAATCGACATGTATGGTGTGGTGTGGCATTAGGTCTTTTCATATGTCTC
TGCGTCGGTGGTGGTATGATTGGTGCCTTCTACGGCCTCAACAAGGATGT
CTTCACCGGTAGTGAGGATATCTGGGAAGGTATCTTCGGTTTCATCGCTT
CTATCATTATCAGTATCATGGGTGCTGGTCTTCTGCGCGTCTCCAAGCTG
CAGGACAAGTGGCGCGACAAGCTGGCCCAGGCTCTCGAAGAGAAAGAGAA
GACCAAGATCGGTATCTACCAGCGGTTCAAAGACTGGTCCAAGAAATATG
TCATGTTCCTTCTTCCGTTCGTGACTGTTCTTCGTGAGGGTCTTGAAGCC
GTCGTGTATGTTGGTGGTGTTGGTCTTGGTCTCCCTGCGACTTCGTTCCC
TCTCGCCGTCGTTTGTGGTCTTGCTGCTGGTATTGCTGTCGGATACCTTC
TTTACAGATGTGGTAACACCGCCTCTCTGCAATATTTCCTGATCATCTCG
ACCTGCTTCCTTTACCTTGTCTCCGCTGGTCTCTTCTCCCGTGCCATCTG
GTACCTCCAGAACAACGCCTGGAACAACATCATCGGCGGTGACGCCTCCG
AAACGGGTTCTGGAGCCGGTTCTTACGATATTCGCCAGAGTGTCTGGCAC
GTCAACTGCTGCAACCCCGAACTGGGTAGCGGTGGTGGATGGGGTATCTT
CAACGCTCTTTTCGGTTGGACCAACTCTGCCACATATGGATCCGTGCTGG
GATACAACCTGTACTGGATCTGCATTATCACCGGCTACGTTTTCATGTGG
TACAATGAGCGCTACGGATACATCCCGTTCTTCTCGGCCTGCATGCGCAG
AATCCGGCCAGGAAAAGCTGCCAGCCGGTCCAGCAGTGAGGGGGTGATTG
AGAAGAGCAAGGAGGTCGATATGATGCCCTCGCAGATTATTACCAGAGAA
GTCAACGCCTGAATGGCCAACAAGGTATTTGCAGTGACGGTGTTCTTCAT
CTGCTTTCGTGAATGTCTCGAGAGTGTCATTATCGTGTCCGTGCTTCTGT
CTTTCCTGAAGCAGACACTAGGAGGAGAAGGCGATGTAAAAACATTAAAA
CGATTAAATCGACATGTATGGTGTGGTGTGGCATTAGGTCTTTTCATATG
TCTCTGCGTCGGTGGTGGTATGATTGGTGCCTTCTACGGCCTCAACAAGG
ATGTCTTCACCGGTAGTGAGGATATCTGGGAAGGTATCTTCGGTTTCATC
GCTTCTATCATTATCAGTATCATGGGTGCTGGTCTTCTGCGCGTCTCCAA
GCTGCAGGACAAGTGGCGCGACAAGCTGGCCCAGGCTCTCGAAGAGAAAG
AGAAGACCAAGATCGGTATCTACCAGCGGTTCAAAGACTGGTCCAAGAAA
TATGTCATGTTCCTTCTTCCGTTCGTGACTGTTCTTCGTGAGGGTCTTGA
AGCCGTCGTGTATGTTGGTGGTGTTGGTCTTGGTCTCCCTGCGACTTCGT
TCCCTCTCGCCGTCGTTTGTGGTCTTGCTGCTGGTATTGCTGTCGGATAC
CTTCTTTACAGATGTGGTAACACCGCCTCTCTGCAATATTTCCTGATCAT
CTCGACCTGCTTCCTTTACCTTGTCTCCGCTGGTCTCTTCTCCCGTGCCA
TCTGGTACCTCCAGAACAACGCCTGGAACAACATCATCGGCGGTGACGCC
TCCGAAACGGGTTCTGGAGCCGGTTCTTACGATATTCGCCAGAGTGTCTG
GCACGTCAACTGCTGCAACCCCGAACTGGGTAGCGGTGGTGGATGGGGTA
TCTTCAACGCTCTTTTCGGTTGGACCAACTCTGCCACATATGGATCCGTG
CTGGGATACAACCTGTACTGGATCTGCATTATCACCGGCTACGTTTTCAT
GTGGTACAATGAGCGCTACGGATACATCCCGTTCTTCTCGGCCTGCATGC
GCAGAATCCGGCCAGGAAAAGCTGCCAGCCGGTCCAGCAGTGAGGGGGTG
ATTGAGAAGAGCAAGGAGGTCGATATGATGCCCTCGCAGATTATTACCAG
AGAAGTCAACGCCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033573high-affinity iron permease complex
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0034755iron ion transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005381iron ion transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_15685CAN33_15685Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15685-T1.exon1CAN33_15685-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_15685-T1.exon2CAN33_15685-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_15685-T1.exon3CAN33_15685-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_15685-T1.exon4CAN33_15685-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15685-T1.cdsCAN33_15685-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15685-T1CAN33_15685-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR004923
DBxrefPFAM:PF03239
ProductIron permease FTR1 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:2241821..2243114 +
Powered by Drupal