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CAN33_1575-T1, CAN33_1575-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_1575-T1
Unique NameCAN33_1575-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:933277..935424-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_1575-T1 ID=CAN33_1575-T1|Name=CAN33_1575-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2148bp|location=Sequence derived from alignment at NKJJ01000004.1:933277..935424- (Aspergillus niger FDAARGOS_311)
ATGGCTTCCAACGCGAAGTGCAGCCCGACTTCTACACAGACGAAGGTGTC
ACATCCAAGATACAGCAATACGATCTCATTTGGTTTGAAGCAACTACTCT
ACGTTCCGCAATGACTATAGCACTACCCTTTTCAATATGTCACGCTCTTC
CCCGGAACCCGTCCCGTCGACTTTTACGTCCGGCGATTCCTTGAAGACCG
AATCACGCTACACCTACCGTCACCTACAGCTTCTCCGTCAAAGTTCAACA
GCAACCCTCTGCGAGTGATCGCTCATATTGATCTCGATGCCTTCTACGCA
CAATGTGAAATGGTACGCCTTAGGACACCCCGCACGGTGCCCTTAGCTGT
ACGACAATGGGACTCGCTCATTGCGATCAACTATCCGGCACGATCCTTCG
GAATAACGAGGATGATATCAGCATCAGAGGCTAAGAAGCTGTGTCCGGAG
ATTGTCCTACAACATGTGGCCACATTTCGGGAAGGAGAAGGTGGGAAATG
GGCATACAGAAACGATGCGTTCAAGCGGATGAATACCGACAAGGTGTGTC
TCGATCCATACCGGGCGGAGTCGCGCAAGATCTTGAAGGTGATGAAGGAG
GAACTGTCAAGATGGCAAAGAGAGCTAGTTGGTGGTGAACACGGAGCTGG
TGCGCAATCTCCCATACAGCACGCTGGTCTTGAGAAAGCTAGCGTTGACG
AAGTCTTCATTGACCTGTCATCTCTCGTGCACGGTGTCCTTCTTCAGCGG
TATCCCGAGCTACGAGCTGAGCTGCAAGGTGATGATCGAGTCACTCCGCT
TCCTGTCCCACCTACGACTGCGTTGGAGTGGAACTCGGAGGATTGCTTGG
TCGATCTGGATGAGAATGAGACAGAAGTCGATGATCCTGACTGGGATGAC
ATTGCTATGCTGATTGGGTCTGAAATTGTTCGGTCGGTCAGGGCAGCTGT
TTGGGATCGGCTCCAATACACTTGCTCTGCGGGTGTTGCGAAGAACAAAA
TGATGGCAAAACTAGGGAGTTCGTGCAACAAGCCGAACAAGCAGACTATT
GTGCGGAATCGTGCTGTACAACGATTCCTCGGTGGCTACAAATTTACAAA
GATTAGGATGCTTGGGGGTAAACTTGGTGACCAGGTTACTGCAATGTTTG
GAACAGAACAAGTGAGTGACCTTATAAAGGTGTCGCTGGAGCAATTTCGC
GCCAAATTAGATGACGATACTGCTACTTGGCTTTATGGAATCATCCGGGG
AGAAGACAAAAGTGAGGTCAATTCGCGGACCCAAATCAAATCGATGCTTT
CAGCCAAGTCTTTCAGGCCGAGCATAAATTCCGTTGATCAGGCAGACAAA
TGGCTTAGTATTTTCGCGGCCGATATCTTTGGCCGCCTTGTTGAGGATGG
CGTTCTTGAGCACAAGCGCCGCCCGAAAACAGTTGCCTTGCATCACCGTC
AAGGAGCTCAGGTTCGCTCCCGTCAAATCCCCATTCCCGGATCAGTACCA
ATCGATGAAGCATTACTCTTTGAGCTTGGCAAAACACTCTTCCGACAGGT
GATGACAGATGGACGCGCATGGCCGTGTGCCAATCTTTCCCTCAGCGTTG
GTGGGTTCGAAGACGGTGTCTCGAAGAACCGGGCAATAGACTCTTTCCTC
CTTCGGGGTGAACAGGCAAAATCTTCACAACCAAAAAGGGATCTGGTGGC
TGAAGAGTCGTCGGATGCTCCGCAACCTGATGAGAAACGCAGGAAACTGG
AGAACAATGGCATTAAGCGCTTTTTCCTCAAGCCGCCGGAGACTGACCTA
CAGCCTGACCAAAATGGTCCTGAACCAGGAGATATGGAAACTGAAATTGA
TGAGCATGCAGGTTCTGTCATCCAGGCCAAGGAGCTCTCTCCTGAGCCGG
TAGAGACGTTGCCAGTGGGTTATACCTGCAGTCGCTGCGGGAGCGTTCTA
CCAGAGCATGAGAAGGGCGAGCATGATGATTGGCACTTTGCCAAAGACCT
GGCAGATGAAGAACGACAGGCATCCAGCGGCCCTCAACAGGCTCCAGTGC
CCGCAAACAGACCCGGAGCATCTAATGCTCGTAATAAGGTCAATCGTAGC
AATCGGGGTAAACCAGAAAAGGGCCAGACTCGTCTTAGATTTGGATAA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:933277..935424-

>CAN33_1575-T1 ID=CAN33_1575-T1|Name=CAN33_1575-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4146bp|location=Sequence derived from alignment at NKJJ01000004.1:933277..935424- (Aspergillus niger FDAARGOS_311)
CACTACCCTTTTCAATATGTCACGCTCTTCCCCGGAACCCGTCCCGTCGA
CTTTTACGTCCGGCGATTCCTTGAAGACCGAATCACGCTACACCTACCGT
CACCTACAGCTTCTCCGTCAAAGTTCAACAGCAACCCTCTGCGAGTGATC
GCTCATATTGATCTCGATGCCTTCTACGCACAATGTGAAATGGTACGCCT
TAGGACACCCCGCACGGTGCCCTTAGCTGTACGACAATGGGACTCGCTCA
TTGCGATCAACTATCCGGCACGATCCTTCGGAATAACGAGGATGATATCA
GCATCAGAGGCTAAGAAGCTGTGTCCGGAGATTGTCCTACAACATGTGGC
CACATTTCGGGAAGGAGAAGGTGGGAAATGGGCATACAGAAACGATGCGT
TCAAGCGGATGAATACCGACAAGGTGTGTCTCGATCCATACCGGGCGGAG
TCGCGCAAGATCTTGAAGGTGATGAAGGAGGAACTGTCAAGATGGCAAAG
AGAGCTAGTTGGTGGTGAACACGGAGCTGGTGCGCAATCTCCCATACAGC
ACGCTGGTCTTGAGAAAGCTAGCGTTGACGAAGTCTTCATTGACCTGTCA
TCTCTCGTGCACGGTGTCCTTCTTCAGCGGTATCCCGAGCTACGAGCTGA
GCTGCAAGGTGATGATCGAGTCACTCCGCTTCCTGTCCCACCTACGACTG
CGTTGGAGTGGAACTCGGAGGATTGCTTGGTCGATCTGGATGAGAATGAG
ACAGAAGTCGATGATCCTGACTGGGATGACATTGCTATGCTGATTGGGTC
TGAAATTGTTCGGTCGGTCAGGGCAGCTGTTTGGGATCGGCTCCAATACA
CTTGCTCTGCGGGTGTTGCGAAGAACAAAATGATGGCAAAACTAGGGAGT
TCGTGCAACAAGCCGAACAAGCAGACTATTGTGCGGAATCGTGCTGTACA
ACGATTCCTCGGTGGCTACAAATTTACAAAGATTAGGATGCTTGGGGGTA
AACTTGGTGACCAGGTTACTGCAATGTTTGGAACAGAACAAGTGAGTGAC
CTTATAAAGGTGTCGCTGGAGCAATTTCGCGCCAAATTAGATGACGATAC
TGCTACTTGGCTTTATGGAATCATCCGGGGAGAAGACAAAAGTGAGGTCA
ATTCGCGGACCCAAATCAAATCGATGCTTTCAGCCAAGTCTTTCAGGCCG
AGCATAAATTCCGTTGATCAGGCAGACAAATGGCTTAGTATTTTCGCGGC
CGATATCTTTGGCCGCCTTGTTGAGGATGGCGTTCTTGAGCACAAGCGCC
GCCCGAAAACAGTTGCCTTGCATCACCGTCAAGGAGCTCAGGTTCGCTCC
CGTCAAATCCCCATTCCCGGATCAGTACCAATCGATGAAGCATTACTCTT
TGAGCTTGGCAAAACACTCTTCCGACAGGTGATGACAGATGGACGCGCAT
GGCCGTGTGCCAATCTTTCCCTCAGCGTTGGTGGGTTCGAAGACGGTGTC
TCGAAGAACCGGGCAATAGACTCTTTCCTCCTTCGGGGTGAACAGGCAAA
ATCTTCACAACCAAAAAGGGATCTGGTGGCTGAAGAGTCGTCGGATGCTC
CGCAACCTGATGAGAAACGCAGGAAACTGGAGAACAATGGCATTAAGCGC
TTTTTCCTCAAGCCGCCGGAGACTGACCTACAGCCTGACCAAAATGGTCC
TGAACCAGGAGATATGGAAACTGAAATTGATGAGCATGCAGGTTCTGTCA
TCCAGGCCAAGGAGCTCTCTCCTGAGCCGGTAGAGACGTTGCCAGTGGGT
TATACCTGCAGTCGCTGCGGGAGCGTTCTACCAGAGCATGAGAAGGGCGA
GCATGATGATTGGCACTTTGCCAAAGACCTGGCAGATGAAGAACGACAGG
CATCCAGCGGCCCTCAACAGGCTCCAGTGCCCGCAAACAGACCCGGAGCA
TCTAATGCTCGTAATAAGGTCAATCGTAGCAATCGGGGTAAACCAGAAAA
GGGCCAGACTCGTCTTAGATTTGGATAAATGGCTTCCAACGCGAAGTGCA
GCCCGACTTCTACACAGACGAAGCACTACCCTTTTCAATATGTCACGCTC
TTCCCCGGAACCCGTCCCGTCGACTTTTACGTCCGGCGATTCCTTGAAGA
CCGAATCACGCTACACCTACCGTCACCTACAGCTTCTCCGTCAAAGTTCA
ACAGCAACCCTCTGCGAGTGATCGCTCATATTGATCTCGATGCCTTCTAC
GCACAATGTGAAATGGTACGCCTTAGGACACCCCGCACGGTGCCCTTAGC
TGTACGACAATGGGACTCGCTCATTGCGATCAACTATCCGGCACGATCCT
TCGGAATAACGAGGATGATATCAGCATCAGAGGCTAAGAAGCTGTGTCCG
GAGATTGTCCTACAACATGTGGCCACATTTCGGGAAGGAGAAGGTGGGAA
ATGGGCATACAGAAACGATGCGTTCAAGCGGATGAATACCGACAAGGTGT
GTCTCGATCCATACCGGGCGGAGTCGCGCAAGATCTTGAAGGTGATGAAG
GAGGAACTGTCAAGATGGCAAAGAGAGCTAGTTGGTGGTGAACACGGAGC
TGGTGCGCAATCTCCCATACAGCACGCTGGTCTTGAGAAAGCTAGCGTTG
ACGAAGTCTTCATTGACCTGTCATCTCTCGTGCACGGTGTCCTTCTTCAG
CGGTATCCCGAGCTACGAGCTGAGCTGCAAGGTGATGATCGAGTCACTCC
GCTTCCTGTCCCACCTACGACTGCGTTGGAGTGGAACTCGGAGGATTGCT
TGGTCGATCTGGATGAGAATGAGACAGAAGTCGATGATCCTGACTGGGAT
GACATTGCTATGCTGATTGGGTCTGAAATTGTTCGGTCGGTCAGGGCAGC
TGTTTGGGATCGGCTCCAATACACTTGCTCTGCGGGTGTTGCGAAGAACA
AAATGATGGCAAAACTAGGGAGTTCGTGCAACAAGCCGAACAAGCAGACT
ATTGTGCGGAATCGTGCTGTACAACGATTCCTCGGTGGCTACAAATTTAC
AAAGATTAGGATGCTTGGGGGTAAACTTGGTGACCAGGTTACTGCAATGT
TTGGAACAGAACAAGTGAGTGACCTTATAAAGGTGTCGCTGGAGCAATTT
CGCGCCAAATTAGATGACGATACTGCTACTTGGCTTTATGGAATCATCCG
GGGAGAAGACAAAAGTGAGGTCAATTCGCGGACCCAAATCAAATCGATGC
TTTCAGCCAAGTCTTTCAGGCCGAGCATAAATTCCGTTGATCAGGCAGAC
AAATGGCTTAGTATTTTCGCGGCCGATATCTTTGGCCGCCTTGTTGAGGA
TGGCGTTCTTGAGCACAAGCGCCGCCCGAAAACAGTTGCCTTGCATCACC
GTCAAGGAGCTCAGGTTCGCTCCCGTCAAATCCCCATTCCCGGATCAGTA
CCAATCGATGAAGCATTACTCTTTGAGCTTGGCAAAACACTCTTCCGACA
GGTGATGACAGATGGACGCGCATGGCCGTGTGCCAATCTTTCCCTCAGCG
TTGGTGGGTTCGAAGACGGTGTCTCGAAGAACCGGGCAATAGACTCTTTC
CTCCTTCGGGGTGAACAGGCAAAATCTTCACAACCAAAAAGGGATCTGGT
GGCTGAAGAGTCGTCGGATGCTCCGCAACCTGATGAGAAACGCAGGAAAC
TGGAGAACAATGGCATTAAGCGCTTTTTCCTCAAGCCGCCGGAGACTGAC
CTACAGCCTGACCAAAATGGTCCTGAACCAGGAGATATGGAAACTGAAAT
TGATGAGCATGCAGGTTCTGTCATCCAGGCCAAGGAGCTCTCTCCTGAGC
CGGTAGAGACGTTGCCAGTGGGTTATACCTGCAGTCGCTGCGGGAGCGTT
CTACCAGAGCATGAGAAGGGCGAGCATGATGATTGGCACTTTGCCAAAGA
CCTGGCAGATGAAGAACGACAGGCATCCAGCGGCCCTCAACAGGCTCCAG
TGCCCGCAAACAGACCCGGAGCATCTAATGCTCGTAATAAGGTCAATCGT
AGCAATCGGGGTAAACCAGAAAAGGGCCAGACTCGTCTTAGATTTGGATA
AATGGCTTCCAACGCGAAGTGCAGCCCGACTTCTACACAGACGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003684damaged DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_1575CAN33_1575Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1575-T1CAN33_1575-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1575-T1.cdsCAN33_1575-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1575-T1.exon2CAN33_1575-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_1575-T1.exon1CAN33_1575-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09261801
DBxrefInterPro:IPR036775
DBxrefInterPro:IPR041298
DBxrefInterPro:IPR017961
DBxrefInterPro:IPR001126
DBxrefPFAM:PF18439
DBxrefPFAM:PF11799
DBxrefPFAM:PF00817
ProductimpB/mucB/samB family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:933277..935424 -
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