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CAN33_15855-T1, CAN33_15855-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_15855-T1
Unique NameCAN33_15855-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:2325047..2326019+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_15855-T1 ID=CAN33_15855-T1|Name=CAN33_15855-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=973bp|location=Sequence derived from alignment at NKJJ01000010.1:2325047..2326019+ (Aspergillus niger FDAARGOS_311)
ATGGCATTCACTCTCTACTACTACACCCCCTCTGCTGCGGCAGCAGGCAT
CTTTGTTGTTCTGTTCGGCATCAGCACTGTATTGCACTTTCTGCAGCTGG
TTCGGACGCGAACGTGGTTCATGATCCCTTTCTTCATTGGAGGAATCTGT
CAGTCACCCAACCCCGACCATGCAGAACTACTACTGACATTATGCTTCAT
CTTCAGTGGAAACAATCGGATATGTTGGCCGTCTGCTGTCATCGCTTGAA
AGCCCCAACTACAGCACAGGCTCGTATGCCATGCAAAGCGCCCTTATTCT
GATCGCTCCCGCCTTCCTGGCTGCCAGTATTTACATGACCCTCGGTCGCA
TCATTCGAATGGTCCAAGCCGAACAGTACTCGGTGTTCAGGTTGAACTGG
GTGACCAAGATCTTTGTTGCGGGCGACGTTCTTTCCTTTCTGATGCAAGC
CTCTGGTGCGTATATTCCTGTCTCCGAATCCTTTCTGGCAGTATCGCTAA
GAACAGTAGGCGCTGGTCTCATGGTCAGCAACTCTAGCGACCCATCCACG
GGCGAGCACATTATTATCGGCGGTCTCTTTGTTCAGATTATCTTCTTCGG
CTTCTTCATTATCACCGCGCTCATCTTCCAAATGCGACTAGCGAAGGCTC
CCACCGGCACTTCCGTTGATTTATCGCACATCTGGCGTCGCCACATGAAC
GCTCTTTACATCTCCAGTGTCCTGATCTTCGTCCGTTCCATTGTCCGTGT
GGTGGAGTACCTGCAGGGATATGACGGCTATCTCATGAAGCATGAGGTTT
TCATTTATGTGTTTGATGCGTTGCTGATGTTCCTGGCGATGGAGATACTC
CAATTCATCCATCCCAGCCAAGTCAACTGCTATCTGGGGCGTGGAGACCG
TTATTCTGACAAGGTGATCAAGACGCAAAAGTTCATGTCTGTGCCGGTGG
AAATGGAGGTTTCGTCCGTTTGA
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Coding sequence (CDS) from alignment at NKJJ01000010.1:2325047..2326019+

>CAN33_15855-T1 ID=CAN33_15855-T1|Name=CAN33_15855-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2583bp|location=Sequence derived from alignment at NKJJ01000010.1:2325047..2326019+ (Aspergillus niger FDAARGOS_311)
ATGGCATTCACTCTCTACTACTACACCCCCTCTGCTGCGGCAGCAGGCAT
CTTTGTTGTTCTGTTCGGCATCAGCACTGTATTGCACTTTCTGCAGCTGG
TTCGGACGCGAACGTGGTTCATGATCCCTTTCTTCATTGGAGGAATCTTG
GAAACAATCGGATATGTTGGCCGTCTGCTGTCATCGCTTGAAAGCCCCAA
CTACAGCACAGGCTCGTATGCCATGCAAAGCGCCCTTATTCTGATCGCTC
CCGCCTTCCTGGCTGCCAGTATTTACATGACCCTCGGTCGCATCATTCGA
ATGGTCCAAGCCGAACAGTACTCGGTGTTCAGGTTGAACTGGGTGACCAA
GATCTTTGTTGCGGGCGACGTTCTTTCCTTTCTGATGCAAGCCTCTGGCG
CTGGTCTCATGGTCAGCAACTCTAGCGACCCATCCACGGGCGAGCACATT
ATTATCGGCGGTCTCTTTGTTCAGATTATCTTCTTCGGCTTCTTCATTAT
CACCGCGCTCATCTTCCAAATGCGACTAGCGAAGGCTCCCACCGGCACTT
CCGTTGATTTATCGCACATCTGGCGTCGCCACATGAACGCTCTTTACATC
TCCAGTGTCCTGATCTTCGTCCGTTCCATTGTCCGTGTGGTGGAGTACCT
GCAGGGATATGACGGCTATCTCATGAAGCATGAGGTTTTCATTTATGTGT
TTGATGCGTTGCTGATGTTCCTGGCGATGGAGATACTCCAATTCATCCAT
CCCAGCCAAGTCAACTGCTATCTGGGGCGTGGAGACCGTTATTCTGACAA
GGTGATCAAGACGCAAAAGTTCATGTCTGTGCCGGTGGAAATGGAGGTTT
CGTCCGTTTGAATGGCATTCACTCTCTACTACTACACCCCCTCTGCTGCG
GCAGCAGGCATCTTTGTTGTTCTGTTCGGCATCAGCACTGTATTGCACTT
TCTGCAGCTGGTTCGGACGCGAACGTGGTTCATGATCCCTTTCTTCATTG
GAGGAATCTTGGAAACAATCGGATATGTTGGCCGTCTGCTGTCATCGCTT
GAAAGCCCCAACTACAGCACAGGCTCGTATGCCATGCAAAGCGCCCTTAT
TCTGATCGCTCCCGCCTTCCTGGCTGCCAGTATTTACATGACCCTCGGTC
GCATCATTCGAATGGTCCAAGCCGAACAGTACTCGGTGTTCAGGTTGAAC
TGGGTGACCAAGATCTTTGTTGCGGGCGACGTTCTTTCCTTTCTGATGCA
AGCCTCTGGCGCTGGTCTCATGGTCAGCAACTCTAGCGACCCATCCACGG
GCGAGCACATTATTATCGGCGGTCTCTTTGTTCAGATTATCTTCTTCGGC
TTCTTCATTATCACCGCGCTCATCTTCCAAATGCGACTAGCGAAGGCTCC
CACCGGCACTTCCGTTGATTTATCGCACATCTGGCGTCGCCACATGAACG
CTCTTTACATCTCCAGTGTCCTGATCTTCGTCCGTTCCATTGTCCGTGTG
GTGGAGTACCTGCAGGGATATGACGGCTATCTCATGAAGCATGAGGTTTT
CATTTATGTGTTTGATGCGTTGCTGATGTTCCTGGCGATGGAGATACTCC
AATTCATCCATCCCAGCCAAGTCAACTGCTATCTGGGGCGTGGAGACCGT
TATTCTGACAAGGTGATCAAGACGCAAAAGTTCATGTCTGTGCCGGTGGA
AATGGAGGTTTCGTCCGTTTGAATGGCATTCACTCTCTACTACTACACCC
CCTCTGCTGCGGCAGCAGGCATCTTTGTTGTTCTGTTCGGCATCAGCACT
GTATTGCACTTTCTGCAGCTGGTTCGGACGCGAACGTGGTTCATGATCCC
TTTCTTCATTGGAGGAATCTTGGAAACAATCGGATATGTTGGCCGTCTGC
TGTCATCGCTTGAAAGCCCCAACTACAGCACAGGCTCGTATGCCATGCAA
AGCGCCCTTATTCTGATCGCTCCCGCCTTCCTGGCTGCCAGTATTTACAT
GACCCTCGGTCGCATCATTCGAATGGTCCAAGCCGAACAGTACTCGGTGT
TCAGGTTGAACTGGGTGACCAAGATCTTTGTTGCGGGCGACGTTCTTTCC
TTTCTGATGCAAGCCTCTGGCGCTGGTCTCATGGTCAGCAACTCTAGCGA
CCCATCCACGGGCGAGCACATTATTATCGGCGGTCTCTTTGTTCAGATTA
TCTTCTTCGGCTTCTTCATTATCACCGCGCTCATCTTCCAAATGCGACTA
GCGAAGGCTCCCACCGGCACTTCCGTTGATTTATCGCACATCTGGCGTCG
CCACATGAACGCTCTTTACATCTCCAGTGTCCTGATCTTCGTCCGTTCCA
TTGTCCGTGTGGTGGAGTACCTGCAGGGATATGACGGCTATCTCATGAAG
CATGAGGTTTTCATTTATGTGTTTGATGCGTTGCTGATGTTCCTGGCGAT
GGAGATACTCCAATTCATCCATCCCAGCCAAGTCAACTGCTATCTGGGGC
GTGGAGACCGTTATTCTGACAAGGTGATCAAGACGCAAAAGTTCATGTCT
GTGCCGGTGGAAATGGAGGTTTCGTCCGTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_15855CAN33_15855Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15855-T1.exon1CAN33_15855-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_15855-T1.exon2CAN33_15855-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_15855-T1.exon3CAN33_15855-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15855-T1.cdsCAN33_15855-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15855-T1CAN33_15855-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000101.2
NoteEggNog:ENOG41
DBxrefInterPro:IPR007568
DBxrefPFAM:PF04479
ProductRTA1 like protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:2325047..2326019 +
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