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CAN33_16025-T1, CAN33_16025-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_16025-T1
Unique NameCAN33_16025-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:2411556..2412785+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_16025-T1 ID=CAN33_16025-T1|Name=CAN33_16025-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1230bp|location=Sequence derived from alignment at NKJJ01000010.1:2411556..2412785+ (Aspergillus niger FDAARGOS_311)
ATGACTGTCCAACAACCACGACTTGAAATCAATGGCTCAGACGAGGAGAA
TACCATGAAAAATGTGAAGACCATATTGGTTACTGGAGGCGCCGGCTTTA
TGTGAGTCTATTACTGTGGCTATGGTCATTGGAGTGTCGAGACACAGATA
GGTAAACTAACACTGCTTTGTCAGTGGAGGCTGGTTCGTTCGACACCTCC
TTCAGGTATACGGAACGAAATATACGGTACTCTGTTTTGATATCCTCGAT
TACTGCGCATCTAAGCGCAACTTTCATCCCGTTGAACATTTGCCTAACTT
TTACTTCTTTCCGGGGGATCTGTGCGACCGCGACAGAGTGACTGCTCTCT
TCCAGCAGTTCAAAGTGGATGCAGTTGTCCACTTCGCGGCCAATTCTCAT
GTGGACCAATCTCTAGTTAACCCGCTCTCTTTCACTCTGAGCAACGTCAC
AGGGACCCATGTCCTTCTGGAAGCAGCACGCCAAGCTGGGACAGTGATAA
GGTTTATCCACATCTCTACTGACGAGGTATACGGAGGAAACCTGCCAGGC
CAAGACTATGCTTTTACCGAGGAAGATCAGCTGAATCCCACCAATCCGTA
CTCTGCTAGCAAAGCCGCTGCTGAGATGATCGCCAATTCCTACCGTTATT
CCTTTCACATGCCCATCATAATAACCCGCTGCAATAACGTTTTCGGTCCC
TGTCAGTACCCCGAAAGTGAGAGCTCCCTGATGCTGATTTAACGGGCTGC
TGTTCCCTGACATACCTTGTGCTAGAACTCATTCCAAAGTTCGCGATGCA
AATGCTACGTTCCCAACGAATGACTTTACATGGTCAGGGAGAGGCAGTTC
GTGGTTTTGTCTACGTCAGTGACGCCATGAGCGCTTTCGATATCATTCTT
CATCGAGGCCTTGTATCTGAGACATACAATATATCCTCGAAAGAGCAGAT
AAAGGTCGTAGACGTTGCGAAACGAATTATCCAGTGGTTTCATGCAGTCC
AGAGCGACACCTGCGAACAATATCTGGAGACAGTCGCAGATAGACCCTTC
AACGACCGGATGTACTGGACCGATGATTCCAAGCTTCGAAGGTTAGGGTG
GGCGGAGAAAGTGTCCTTTAATGACGGACTCAGAATGACACTGGAATGGT
ATCGCGACCATGGCGAAACATTCTGGTCTGGACCAGGCCCAGCTTGTACA
GTAAACGGGAGTCTGGGCTCATCATATTAA
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Coding sequence (CDS) from alignment at NKJJ01000010.1:2411556..2412785+

>CAN33_16025-T1 ID=CAN33_16025-T1|Name=CAN33_16025-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3294bp|location=Sequence derived from alignment at NKJJ01000010.1:2411556..2412785+ (Aspergillus niger FDAARGOS_311)
ATGACTGTCCAACAACCACGACTTGAAATCAATGGCTCAGACGAGGAGAA
TACCATGAAAAATGTGAAGACCATATTGGTTACTGGAGGCGCCGGCTTTA
TTGGAGGCTGGTTCGTTCGACACCTCCTTCAGGTATACGGAACGAAATAT
ACGGTACTCTGTTTTGATATCCTCGATTACTGCGCATCTAAGCGCAACTT
TCATCCCGTTGAACATTTGCCTAACTTTTACTTCTTTCCGGGGGATCTGT
GCGACCGCGACAGAGTGACTGCTCTCTTCCAGCAGTTCAAAGTGGATGCA
GTTGTCCACTTCGCGGCCAATTCTCATGTGGACCAATCTCTAGTTAACCC
GCTCTCTTTCACTCTGAGCAACGTCACAGGGACCCATGTCCTTCTGGAAG
CAGCACGCCAAGCTGGGACAGTGATAAGGTTTATCCACATCTCTACTGAC
GAGGTATACGGAGGAAACCTGCCAGGCCAAGACTATGCTTTTACCGAGGA
AGATCAGCTGAATCCCACCAATCCGTACTCTGCTAGCAAAGCCGCTGCTG
AGATGATCGCCAATTCCTACCGTTATTCCTTTCACATGCCCATCATAATA
ACCCGCTGCAATAACGTTTTCGGTCCCTGTCAGTACCCCGAAAAACTCAT
TCCAAAGTTCGCGATGCAAATGCTACGTTCCCAACGAATGACTTTACATG
GTCAGGGAGAGGCAGTTCGTGGTTTTGTCTACGTCAGTGACGCCATGAGC
GCTTTCGATATCATTCTTCATCGAGGCCTTGTATCTGAGACATACAATAT
ATCCTCGAAAGAGCAGATAAAGGTCGTAGACGTTGCGAAACGAATTATCC
AGTGGTTTCATGCAGTCCAGAGCGACACCTGCGAACAATATCTGGAGACA
GTCGCAGATAGACCCTTCAACGACCGGATGTACTGGACCGATGATTCCAA
GCTTCGAAGGTTAGGGTGGGCGGAGAAAGTGTCCTTTAATGACGGACTCA
GAATGACACTGGAATGGTATCGCGACCATGGCGAAACATTCTGGTCTGGA
CCAGGCCCAGCTTGTACAGTAAACGGGAGTCTGGGCTCATCATATTAAAT
GACTGTCCAACAACCACGACTTGAAATCAATGGCTCAGACGAGGAGAATA
CCATGAAAAATGTGAAGACCATATTGGTTACTGGAGGCGCCGGCTTTATT
GGAGGCTGGTTCGTTCGACACCTCCTTCAGGTATACGGAACGAAATATAC
GGTACTCTGTTTTGATATCCTCGATTACTGCGCATCTAAGCGCAACTTTC
ATCCCGTTGAACATTTGCCTAACTTTTACTTCTTTCCGGGGGATCTGTGC
GACCGCGACAGAGTGACTGCTCTCTTCCAGCAGTTCAAAGTGGATGCAGT
TGTCCACTTCGCGGCCAATTCTCATGTGGACCAATCTCTAGTTAACCCGC
TCTCTTTCACTCTGAGCAACGTCACAGGGACCCATGTCCTTCTGGAAGCA
GCACGCCAAGCTGGGACAGTGATAAGGTTTATCCACATCTCTACTGACGA
GGTATACGGAGGAAACCTGCCAGGCCAAGACTATGCTTTTACCGAGGAAG
ATCAGCTGAATCCCACCAATCCGTACTCTGCTAGCAAAGCCGCTGCTGAG
ATGATCGCCAATTCCTACCGTTATTCCTTTCACATGCCCATCATAATAAC
CCGCTGCAATAACGTTTTCGGTCCCTGTCAGTACCCCGAAAAACTCATTC
CAAAGTTCGCGATGCAAATGCTACGTTCCCAACGAATGACTTTACATGGT
CAGGGAGAGGCAGTTCGTGGTTTTGTCTACGTCAGTGACGCCATGAGCGC
TTTCGATATCATTCTTCATCGAGGCCTTGTATCTGAGACATACAATATAT
CCTCGAAAGAGCAGATAAAGGTCGTAGACGTTGCGAAACGAATTATCCAG
TGGTTTCATGCAGTCCAGAGCGACACCTGCGAACAATATCTGGAGACAGT
CGCAGATAGACCCTTCAACGACCGGATGTACTGGACCGATGATTCCAAGC
TTCGAAGGTTAGGGTGGGCGGAGAAAGTGTCCTTTAATGACGGACTCAGA
ATGACACTGGAATGGTATCGCGACCATGGCGAAACATTCTGGTCTGGACC
AGGCCCAGCTTGTACAGTAAACGGGAGTCTGGGCTCATCATATTAAATGA
CTGTCCAACAACCACGACTTGAAATCAATGGCTCAGACGAGGAGAATACC
ATGAAAAATGTGAAGACCATATTGGTTACTGGAGGCGCCGGCTTTATTGG
AGGCTGGTTCGTTCGACACCTCCTTCAGGTATACGGAACGAAATATACGG
TACTCTGTTTTGATATCCTCGATTACTGCGCATCTAAGCGCAACTTTCAT
CCCGTTGAACATTTGCCTAACTTTTACTTCTTTCCGGGGGATCTGTGCGA
CCGCGACAGAGTGACTGCTCTCTTCCAGCAGTTCAAAGTGGATGCAGTTG
TCCACTTCGCGGCCAATTCTCATGTGGACCAATCTCTAGTTAACCCGCTC
TCTTTCACTCTGAGCAACGTCACAGGGACCCATGTCCTTCTGGAAGCAGC
ACGCCAAGCTGGGACAGTGATAAGGTTTATCCACATCTCTACTGACGAGG
TATACGGAGGAAACCTGCCAGGCCAAGACTATGCTTTTACCGAGGAAGAT
CAGCTGAATCCCACCAATCCGTACTCTGCTAGCAAAGCCGCTGCTGAGAT
GATCGCCAATTCCTACCGTTATTCCTTTCACATGCCCATCATAATAACCC
GCTGCAATAACGTTTTCGGTCCCTGTCAGTACCCCGAAAAACTCATTCCA
AAGTTCGCGATGCAAATGCTACGTTCCCAACGAATGACTTTACATGGTCA
GGGAGAGGCAGTTCGTGGTTTTGTCTACGTCAGTGACGCCATGAGCGCTT
TCGATATCATTCTTCATCGAGGCCTTGTATCTGAGACATACAATATATCC
TCGAAAGAGCAGATAAAGGTCGTAGACGTTGCGAAACGAATTATCCAGTG
GTTTCATGCAGTCCAGAGCGACACCTGCGAACAATATCTGGAGACAGTCG
CAGATAGACCCTTCAACGACCGGATGTACTGGACCGATGATTCCAAGCTT
CGAAGGTTAGGGTGGGCGGAGAAAGTGTCCTTTAATGACGGACTCAGAAT
GACACTGGAATGGTATCGCGACCATGGCGAAACATTCTGGTCTGGACCAG
GCCCAGCTTGTACAGTAAACGGGAGTCTGGGCTCATCATATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009225nucleotide-sugar metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008460dTDP-glucose 4,6-dehydratase activity
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_16025CAN33_16025Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16025-T1.exon1CAN33_16025-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_16025-T1.exon2CAN33_16025-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_16025-T1.exon3CAN33_16025-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16025-T1.cdsCAN33_16025-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16025-T1CAN33_16025-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR005888
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR016040
DBxrefPFAM:PF04321
DBxrefPFAM:PF02719
DBxrefPFAM:PF07993
DBxrefPFAM:PF16363
DBxrefPFAM:PF01370
DBxrefPFAM:PF01073
ProductNAD dependent epimerase/dehydratase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:2411556..2412785 +
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