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CAN33_1610-T1, CAN33_1610-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_1610-T1
Unique NameCAN33_1610-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:953562..954700+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_1610-T1 ID=CAN33_1610-T1|Name=CAN33_1610-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1139bp|location=Sequence derived from alignment at NKJJ01000004.1:953562..954700+ (Aspergillus niger FDAARGOS_311)
ATGCGGCCACAGTAAGCTCCGCCTCGGACTCTCTATTCCGCAACAATCGA
TCGGAGGTTGTCGCAGTCGCTAATACACTGGGTTCTTAATAGGCGGGAAT
ACCATATCGTTGTTTTAGGTGCTGGTGGGTACACACATCTGTGACAGACA
ATAAGAAATGTTTCACCGCTGACCATCGGTCGTTGTCGGCGCAATAGGAG
GTGTGGGAAAGAGCTGTCTTACTGGTATGCTCCTGGTCGCATATATCTAC
CTGGTTCTTTGCCATGATTTGCTGATGCTGAGTAGCTCAATTCGTGCAAA
ATGTCTGGATCGAGAGCTATGACCCTACAATCGAGGATTCATACCGGAAG
CAGATCGACGTGGATGTAAGTTCGGCTTCGACCTTGTCTGGATATAGTCA
CTTACACTCCTAGGGCCGGCAATGTATTCTGGAAATGTATGTGTTGTGCG
CAGCGAATCTGTTCCACAGCGCAATTGCATCACTACGGTGAACCGAGATA
GCTGACTGTTGTATCCAGACTGGACACTGCAGGAACAGAACAGTTTAGTA
AGTCTTCGTGGACACGGTAGCATCCAAGTTCTCTGGTACTAACATTTTCT
TAGCGGCCATGAGGTAAATGCGCCCACTCAGGACTCCCTCCTCCCGCCAA
GTTATACGGCGTATTTACAACCGTTGCCATTTCGGGCCCCATGCTGACGT
TGGATTGCATTCCAGAGAGTTGTACATGAAACAAGGCCAAGGGTTTCTGC
TCGTATTCTCAATTACGAGCATGTCCTCGCTGAACGAGTTGTCCGAGCTA
CGCGAACAAATAATCCGCATCAAGGAGGATGAGAAAGTTCCCATTGTCAT
CGTGGGCAACAAGTCCGACCTGGAAGAGGACCGCGCTGTGCCACGCGCGC
GCGCATTCGCCCTCTCCCAAACCTGGGGAAACGCCCCCTACTACGAAACC
TCGGCCCGTCGACGAGCTAACGTCAACGAAGTCTTCATTGACCTCTGCCG
ACAGATCATCCGAAAGGACCTGCAAGGAAATTCCAAGAACTCCGACTCAG
ATCGCAAACGGGAAGGTGGCAATCGGCAGGACCGTCGAAAGGACAAAAAG
CGCCAGACCCGGCGCAAGGGACCCTGCGTGATCCTATAA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:953562..954700+

>CAN33_1610-T1 ID=CAN33_1610-T1|Name=CAN33_1610-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5088bp|location=Sequence derived from alignment at NKJJ01000004.1:953562..954700+ (Aspergillus niger FDAARGOS_311)
ATGCGGCCACAGCGGGAATACCATATCGTTGTTTTAGGTGCTGGAGGTGT
GGGAAAGAGCTGTCTTACTGCTCAATTCGTGCAAAATGTCTGGATCGAGA
GCTATGACCCTACAATCGAGGATTCATACCGGAAGCAGATCGACGTGGAT
GGCCGGCAATGTATTCTGGAAATACTGGACACTGCAGGAACAGAACAGTT
TACGGCCATGAGAGAGTTGTACATGAAACAAGGCCAAGGGTTTCTGCTCG
TATTCTCAATTACGAGCATGTCCTCGCTGAACGAGTTGTCCGAGCTACGC
GAACAAATAATCCGCATCAAGGAGGATGAGAAAGTTCCCATTGTCATCGT
GGGCAACAAGTCCGACCTGGAAGAGGACCGCGCTGTGCCACGCGCGCGCG
CATTCGCCCTCTCCCAAACCTGGGGAAACGCCCCCTACTACGAAACCTCG
GCCCGTCGACGAGCTAACGTCAACGAAGTCTTCATTGACCTCTGCCGACA
GATCATCCGAAAGGACCTGCAAGGAAATTCCAAGAACTCCGACTCAGATC
GCAAACGGGAAGGTGGCAATCGGCAGGACCGTCGAAAGGACAAAAAGCGC
CAGACCCGGCGCAAGGGACCCTGCGTGATCCTATAAATGCGGCCACAGCG
GGAATACCATATCGTTGTTTTAGGTGCTGGAGGTGTGGGAAAGAGCTGTC
TTACTGCTCAATTCGTGCAAAATGTCTGGATCGAGAGCTATGACCCTACA
ATCGAGGATTCATACCGGAAGCAGATCGACGTGGATGGCCGGCAATGTAT
TCTGGAAATACTGGACACTGCAGGAACAGAACAGTTTACGGCCATGAGAG
AGTTGTACATGAAACAAGGCCAAGGGTTTCTGCTCGTATTCTCAATTACG
AGCATGTCCTCGCTGAACGAGTTGTCCGAGCTACGCGAACAAATAATCCG
CATCAAGGAGGATGAGAAAGTTCCCATTGTCATCGTGGGCAACAAGTCCG
ACCTGGAAGAGGACCGCGCTGTGCCACGCGCGCGCGCATTCGCCCTCTCC
CAAACCTGGGGAAACGCCCCCTACTACGAAACCTCGGCCCGTCGACGAGC
TAACGTCAACGAAGTCTTCATTGACCTCTGCCGACAGATCATCCGAAAGG
ACCTGCAAGGAAATTCCAAGAACTCCGACTCAGATCGCAAACGGGAAGGT
GGCAATCGGCAGGACCGTCGAAAGGACAAAAAGCGCCAGACCCGGCGCAA
GGGACCCTGCGTGATCCTATAAATGCGGCCACAGCGGGAATACCATATCG
TTGTTTTAGGTGCTGGAGGTGTGGGAAAGAGCTGTCTTACTGCTCAATTC
GTGCAAAATGTCTGGATCGAGAGCTATGACCCTACAATCGAGGATTCATA
CCGGAAGCAGATCGACGTGGATGGCCGGCAATGTATTCTGGAAATACTGG
ACACTGCAGGAACAGAACAGTTTACGGCCATGAGAGAGTTGTACATGAAA
CAAGGCCAAGGGTTTCTGCTCGTATTCTCAATTACGAGCATGTCCTCGCT
GAACGAGTTGTCCGAGCTACGCGAACAAATAATCCGCATCAAGGAGGATG
AGAAAGTTCCCATTGTCATCGTGGGCAACAAGTCCGACCTGGAAGAGGAC
CGCGCTGTGCCACGCGCGCGCGCATTCGCCCTCTCCCAAACCTGGGGAAA
CGCCCCCTACTACGAAACCTCGGCCCGTCGACGAGCTAACGTCAACGAAG
TCTTCATTGACCTCTGCCGACAGATCATCCGAAAGGACCTGCAAGGAAAT
TCCAAGAACTCCGACTCAGATCGCAAACGGGAAGGTGGCAATCGGCAGGA
CCGTCGAAAGGACAAAAAGCGCCAGACCCGGCGCAAGGGACCCTGCGTGA
TCCTATAAATGCGGCCACAGCGGGAATACCATATCGTTGTTTTAGGTGCT
GGAGGTGTGGGAAAGAGCTGTCTTACTGCTCAATTCGTGCAAAATGTCTG
GATCGAGAGCTATGACCCTACAATCGAGGATTCATACCGGAAGCAGATCG
ACGTGGATGGCCGGCAATGTATTCTGGAAATACTGGACACTGCAGGAACA
GAACAGTTTACGGCCATGAGAGAGTTGTACATGAAACAAGGCCAAGGGTT
TCTGCTCGTATTCTCAATTACGAGCATGTCCTCGCTGAACGAGTTGTCCG
AGCTACGCGAACAAATAATCCGCATCAAGGAGGATGAGAAAGTTCCCATT
GTCATCGTGGGCAACAAGTCCGACCTGGAAGAGGACCGCGCTGTGCCACG
CGCGCGCGCATTCGCCCTCTCCCAAACCTGGGGAAACGCCCCCTACTACG
AAACCTCGGCCCGTCGACGAGCTAACGTCAACGAAGTCTTCATTGACCTC
TGCCGACAGATCATCCGAAAGGACCTGCAAGGAAATTCCAAGAACTCCGA
CTCAGATCGCAAACGGGAAGGTGGCAATCGGCAGGACCGTCGAAAGGACA
AAAAGCGCCAGACCCGGCGCAAGGGACCCTGCGTGATCCTATAAATGCGG
CCACAGCGGGAATACCATATCGTTGTTTTAGGTGCTGGAGGTGTGGGAAA
GAGCTGTCTTACTGCTCAATTCGTGCAAAATGTCTGGATCGAGAGCTATG
ACCCTACAATCGAGGATTCATACCGGAAGCAGATCGACGTGGATGGCCGG
CAATGTATTCTGGAAATACTGGACACTGCAGGAACAGAACAGTTTACGGC
CATGAGAGAGTTGTACATGAAACAAGGCCAAGGGTTTCTGCTCGTATTCT
CAATTACGAGCATGTCCTCGCTGAACGAGTTGTCCGAGCTACGCGAACAA
ATAATCCGCATCAAGGAGGATGAGAAAGTTCCCATTGTCATCGTGGGCAA
CAAGTCCGACCTGGAAGAGGACCGCGCTGTGCCACGCGCGCGCGCATTCG
CCCTCTCCCAAACCTGGGGAAACGCCCCCTACTACGAAACCTCGGCCCGT
CGACGAGCTAACGTCAACGAAGTCTTCATTGACCTCTGCCGACAGATCAT
CCGAAAGGACCTGCAAGGAAATTCCAAGAACTCCGACTCAGATCGCAAAC
GGGAAGGTGGCAATCGGCAGGACCGTCGAAAGGACAAAAAGCGCCAGACC
CGGCGCAAGGGACCCTGCGTGATCCTATAAATGCGGCCACAGCGGGAATA
CCATATCGTTGTTTTAGGTGCTGGAGGTGTGGGAAAGAGCTGTCTTACTG
CTCAATTCGTGCAAAATGTCTGGATCGAGAGCTATGACCCTACAATCGAG
GATTCATACCGGAAGCAGATCGACGTGGATGGCCGGCAATGTATTCTGGA
AATACTGGACACTGCAGGAACAGAACAGTTTACGGCCATGAGAGAGTTGT
ACATGAAACAAGGCCAAGGGTTTCTGCTCGTATTCTCAATTACGAGCATG
TCCTCGCTGAACGAGTTGTCCGAGCTACGCGAACAAATAATCCGCATCAA
GGAGGATGAGAAAGTTCCCATTGTCATCGTGGGCAACAAGTCCGACCTGG
AAGAGGACCGCGCTGTGCCACGCGCGCGCGCATTCGCCCTCTCCCAAACC
TGGGGAAACGCCCCCTACTACGAAACCTCGGCCCGTCGACGAGCTAACGT
CAACGAAGTCTTCATTGACCTCTGCCGACAGATCATCCGAAAGGACCTGC
AAGGAAATTCCAAGAACTCCGACTCAGATCGCAAACGGGAAGGTGGCAAT
CGGCAGGACCGTCGAAAGGACAAAAAGCGCCAGACCCGGCGCAAGGGACC
CTGCGTGATCCTATAAATGCGGCCACAGCGGGAATACCATATCGTTGTTT
TAGGTGCTGGAGGTGTGGGAAAGAGCTGTCTTACTGCTCAATTCGTGCAA
AATGTCTGGATCGAGAGCTATGACCCTACAATCGAGGATTCATACCGGAA
GCAGATCGACGTGGATGGCCGGCAATGTATTCTGGAAATACTGGACACTG
CAGGAACAGAACAGTTTACGGCCATGAGAGAGTTGTACATGAAACAAGGC
CAAGGGTTTCTGCTCGTATTCTCAATTACGAGCATGTCCTCGCTGAACGA
GTTGTCCGAGCTACGCGAACAAATAATCCGCATCAAGGAGGATGAGAAAG
TTCCCATTGTCATCGTGGGCAACAAGTCCGACCTGGAAGAGGACCGCGCT
GTGCCACGCGCGCGCGCATTCGCCCTCTCCCAAACCTGGGGAAACGCCCC
CTACTACGAAACCTCGGCCCGTCGACGAGCTAACGTCAACGAAGTCTTCA
TTGACCTCTGCCGACAGATCATCCGAAAGGACCTGCAAGGAAATTCCAAG
AACTCCGACTCAGATCGCAAACGGGAAGGTGGCAATCGGCAGGACCGTCG
AAAGGACAAAAAGCGCCAGACCCGGCGCAAGGGACCCTGCGTGATCCTAT
AAATGCGGCCACAGCGGGAATACCATATCGTTGTTTTAGGTGCTGGAGGT
GTGGGAAAGAGCTGTCTTACTGCTCAATTCGTGCAAAATGTCTGGATCGA
GAGCTATGACCCTACAATCGAGGATTCATACCGGAAGCAGATCGACGTGG
ATGGCCGGCAATGTATTCTGGAAATACTGGACACTGCAGGAACAGAACAG
TTTACGGCCATGAGAGAGTTGTACATGAAACAAGGCCAAGGGTTTCTGCT
CGTATTCTCAATTACGAGCATGTCCTCGCTGAACGAGTTGTCCGAGCTAC
GCGAACAAATAATCCGCATCAAGGAGGATGAGAAAGTTCCCATTGTCATC
GTGGGCAACAAGTCCGACCTGGAAGAGGACCGCGCTGTGCCACGCGCGCG
CGCATTCGCCCTCTCCCAAACCTGGGGAAACGCCCCCTACTACGAAACCT
CGGCCCGTCGACGAGCTAACGTCAACGAAGTCTTCATTGACCTCTGCCGA
CAGATCATCCGAAAGGACCTGCAAGGAAATTCCAAGAACTCCGACTCAGA
TCGCAAACGGGAAGGTGGCAATCGGCAGGACCGTCGAAAGGACAAAAAGC
GCCAGACCCGGCGCAAGGGACCCTGCGTGATCCTATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RAP1BCAN33_1610Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1610-T1CAN33_1610-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1610-T1.exon1CAN33_1610-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_1610-T1.exon2CAN33_1610-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_1610-T1.exon3CAN33_1610-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_1610-T1.exon4CAN33_1610-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_1610-T1.exon5CAN33_1610-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_1610-T1.exon6CAN33_1610-T1.exon6Aspergillus niger FDAARGOS_311exon
CAN33_1610-T1.exon7CAN33_1610-T1.exon7Aspergillus niger FDAARGOS_311exon
CAN33_1610-T1.exon8CAN33_1610-T1.exon8Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1610-T1.cdsCAN33_1610-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR041841
DBxrefInterPro:IPR020849
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR001806
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF00025
ProductRas- protein Rap-1b
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:953562..954700 +
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