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CAN33_16120-T1, CAN33_16120-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_16120-T1
Unique NameCAN33_16120-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:2465189..2465730+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_16120-T1 ID=CAN33_16120-T1|Name=CAN33_16120-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=542bp|location=Sequence derived from alignment at NKJJ01000010.1:2465189..2465730+ (Aspergillus niger FDAARGOS_311)
ATGTCCCTTCTCCGCTACTACAACAAAGGTTTTGGTGAGGCCGCCTTGAA
GTCCCACGCCTACAACCAAGCCGTCCGCGTCGGCGACACCATCCACCTCT
CCGGTCAGGGTATGTCACATCCCCCTCTCCGCAGCGACTGGCCTTCAATG
AAAAACACACTGCACCAGCGCAGGAGGGAAAAAAACACCAATGGAAAAAG
CAAAAAGTAATAAAGACTGTAGGTGGCTGGAAACAGGAGGAACCTTTCGA
GATCTACACCGACATCAACGCCCAGATTGACCAGGCTTTTGCCAATGTCG
ATTTCCAGCTGCGCAACGCCGGTGGTCAGGGCTGGTCTCAGGTATACAAG
GTCCGCTCCTACCACATACCTTTGGTCGAAGAGGCACAGGATGCCATGGT
TCGCAATTTCCGCAAGTGGATGGTCAACCACAAGGCGCTATGGACGTGCA
TGCAGGTTAGCCGCCTTGGCGCCGACGACATGCGGGTTGAGATTGAGGTC
GAAGCATACGATCCTGAGGGTGCTAAGGCAGCTACATCATAG
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Coding sequence (CDS) from alignment at NKJJ01000010.1:2465189..2465730+

>CAN33_16120-T1 ID=CAN33_16120-T1|Name=CAN33_16120-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=858bp|location=Sequence derived from alignment at NKJJ01000010.1:2465189..2465730+ (Aspergillus niger FDAARGOS_311)
ATGTCCCTTCTCCGCTACTACAACAAAGGTTTTGGTGAGGCCGCCTTGAA
GTCCCACGCCTACAACCAAGCCGTCCGCGTCGGCGACACCATCCACCTCT
CCGGTCAGGGTGGCTGGAAACAGGAGGAACCTTTCGAGATCTACACCGAC
ATCAACGCCCAGATTGACCAGGCTTTTGCCAATGTCGATTTCCAGCTGCG
CAACGCCGGTGGTCAGGGCTGGTCTCAGGTATACAAGGTCCGCTCCTACC
ACATACCTTTGGTCGAAGAGGCACAGGATGCCATGGTTCGCAATTTCCGC
AAGTGGATGGTCAACCACAAGGCGCTATGGACGTGCATGCAGGTTAGCCG
CCTTGGCGCCGACGACATGCGGGTTGAGATTGAGGTCGAAGCATACGATC
CTGAGGGTGCTAAGGCAGCTACATCATAGATGTCCCTTCTCCGCTACTAC
AACAAAGGTTTTGGTGAGGCCGCCTTGAAGTCCCACGCCTACAACCAAGC
CGTCCGCGTCGGCGACACCATCCACCTCTCCGGTCAGGGTGGCTGGAAAC
AGGAGGAACCTTTCGAGATCTACACCGACATCAACGCCCAGATTGACCAG
GCTTTTGCCAATGTCGATTTCCAGCTGCGCAACGCCGGTGGTCAGGGCTG
GTCTCAGGTATACAAGGTCCGCTCCTACCACATACCTTTGGTCGAAGAGG
CACAGGATGCCATGGTTCGCAATTTCCGCAAGTGGATGGTCAACCACAAG
GCGCTATGGACGTGCATGCAGGTTAGCCGCCTTGGCGCCGACGACATGCG
GGTTGAGATTGAGGTCGAAGCATACGATCCTGAGGGTGCTAAGGCAGCTA
CATCATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_16120CAN33_16120Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16120-T1.exon1CAN33_16120-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_16120-T1.exon2CAN33_16120-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16120-T1.cdsCAN33_16120-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16120-T1CAN33_16120-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR035959
DBxrefInterPro:IPR006175
DBxrefPFAM:PF01042
ProductEndoribonuclease L-PSP family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:2465189..2465730 +
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