You are here

Home

CAN33_1615-T1, CAN33_1615-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_1615-T1
Unique NameCAN33_1615-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:955894..957160-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_1615-T1 ID=CAN33_1615-T1|Name=CAN33_1615-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1267bp|location=Sequence derived from alignment at NKJJ01000004.1:955894..957160- (Aspergillus niger FDAARGOS_311)
ATGGCTTCTCCGCTCCACCGACATTGCTCATCCTTGGATGAAGTCATCTT
TCCCGACCAGCAATGCTTGACACCAGAAGAGCATGATAAAGCCACGAAGC
TTTTTGACAAGCTAATTGAACGTTTCGAGCCTTTACAGACATCGAACAAA
GATTATAGACCACTAACACTTATACGCCTCACGAAAGAGGAGGTCTCTGC
TGAAGATGAGTTCCTGATCCTCTTCTTCACTCTCATCGAACACGATCATC
TTGGAGTCACAACAGCAATCAGAGTAGCTGAGGTCCTAGGAAGGTTACGC
ACTTTTGAGAGATGGACTTCCGAAGAGCAAAACATCCTTCTTCAATGTTT
AGTCCACTTCGCCGATTATCTGATAGATAATTTCTTCTTACCACGTATGT
TGCTGACATATCTAGTCATCGCAGGATACTGACTCTATATTTAGTTAAAC
TAACAGCCGCGAAGGCTACTCAACCTACGATGATAGATTCATTAGAACCA
ACTATTGGCACTCCACAGCACATCCCTGATCTACGACAAGCCTGTCTCAC
GCGTGACCGCCATCGATGTGTCGTGACCCGAAAGTTCGATATTCGGGAGG
CTGAAAAGAGATGCAAGGTACTAGATGGAGATAACGTGAAAGACGATGAC
GGGAATCCTTTGCTGCAGGAAGCTAAAGGCATGACCTATCTCGAAGTAGC
GTATATCATTCCTCATTCTCTCATGTCTCATAGTGACATACATATTGCTG
GAGAATCGAAATTAGTACGTTATCACTTAAGCTTGTAGCATTCTGCTAAT
TAATCCTCTAGGCTACTCACAAGATCCTAATGATGTTCGACCCAAAAACT
ATTTCCCTCATCAACAAAACCAACATTAACCAACAACTTCTAAACACGCT
AACCTTAACTCACGACCTTCATCAATCATTTCGTGCTTTCGAGATCACTT
TTGAACAAGTCCAGGATCATCCACACACATACACAATCAACTATATCGAC
CCAAACCGCATGTTCCGAATCCATAGACTTCCTATCACCCGCACGCTCTA
TGCCACCCCCAACGGAAGTATAGAACCACCATCCCCTCAACTTCTGGAAG
TCCATCATTCTATCGGGCGCATTCTTCACTTCAGTGCTGCCGGCGAATAT
CTCGATAAATTCATCCAAGACATGGAAGAAATGGAAGAAGGAGGGGGAAT
CTGCTCGAATGGGTCTACTCGCGTTGATGATTATGTTCGGTATAAACTTA
CAACAATTGGACTTTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000004.1:955894..957160-

>CAN33_1615-T1 ID=CAN33_1615-T1|Name=CAN33_1615-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3510bp|location=Sequence derived from alignment at NKJJ01000004.1:955894..957160- (Aspergillus niger FDAARGOS_311)
GCTACTCACAAGATCCTAATGATGTTCGACCCAAAAACTATTTCCCTCAT
CAACAAAACCAACATTAACCAACAACTTCTAAACACGCTAACCTTAACTC
ACGACCTTCATCAATCATTTCGTGCTTTCGAGATCACTTTTGAACAAGTC
CAGGATCATCCACACACATACACAATCAACTATATCGACCCAAACCGCAT
GTTCCGAATCCATAGACTTCCTATCACCCGCACGCTCTATGCCACCCCCA
ACGGAAGTATAGAACCACCATCCCCTCAACTTCTGGAAGTCCATCATTCT
ATCGGGCGCATTCTTCACTTCAGTGCTGCCGGCGAATATCTCGATAAATT
CATCCAAGACATGGAAGAAATGGAAGAAGGAGGGGGAATCTGCTCGAATG
GGTCTACTCGCGTTGATGATTATGTTCGGTATAAACTTACAACAATTGGA
CTTTAATTAAACTAACAGCCGCGAAGGCTACTCAACCTACGATGATAGAT
TCATTAGAACCAACTATTGGCACTCCACAGCACATCCCTGATCTACGACA
AGCCTGTCTCACGCGTGACCGCCATCGATGTGTCGTGACCCGAAAGTTCG
ATATTCGGGAGGCTGAAAAGAGATGCAAGGTACTAGATGGAGATAACGTG
AAAGACGATGACGGGAATCCTTTGCTGCAGGAAGCTAAAGGCATGACCTA
TCTCGAAGTAGCGTATATCATTCCTCATTCTCTCATGTCTCATAGTGACA
TACATATTGCTGGAGAATCGAAATTAATGGCTTCTCCGCTCCACCGACAT
TGCTCATCCTTGGATGAAGTCATCTTTCCCGACCAGCAATGCTTGACACC
AGAAGAGCATGATAAAGCCACGAAGCTTTTTGACAAGCTAATTGAACGTT
TCGAGCCTTTACAGACATCGAACAAAGATTATAGACCACTAACACTTATA
CGCCTCACGAAAGAGGAGGTCTCTGCTGAAGATGAGTTCCTGATCCTCTT
CTTCACTCTCATCGAACACGATCATCTTGGAGTCACAACAGCAATCAGAG
TAGCTGAGGTCCTAGGAAGGTTACGCACTTTTGAGAGATGGACTTCCGAA
GAGCAAAACATCCTTCTTCAATGTTTAGTCCACTTCGCCGATTATCTGAT
AGATAATTTCTTCTTACCACGCTACTCACAAGATCCTAATGATGTTCGAC
CCAAAAACTATTTCCCTCATCAACAAAACCAACATTAACCAACAACTTCT
AAACACGCTAACCTTAACTCACGACCTTCATCAATCATTTCGTGCTTTCG
AGATCACTTTTGAACAAGTCCAGGATCATCCACACACATACACAATCAAC
TATATCGACCCAAACCGCATGTTCCGAATCCATAGACTTCCTATCACCCG
CACGCTCTATGCCACCCCCAACGGAAGTATAGAACCACCATCCCCTCAAC
TTCTGGAAGTCCATCATTCTATCGGGCGCATTCTTCACTTCAGTGCTGCC
GGCGAATATCTCGATAAATTCATCCAAGACATGGAAGAAATGGAAGAAGG
AGGGGGAATCTGCTCGAATGGGTCTACTCGCGTTGATGATTATGTTCGGT
ATAAACTTACAACAATTGGACTTTAATTAAACTAACAGCCGCGAAGGCTA
CTCAACCTACGATGATAGATTCATTAGAACCAACTATTGGCACTCCACAG
CACATCCCTGATCTACGACAAGCCTGTCTCACGCGTGACCGCCATCGATG
TGTCGTGACCCGAAAGTTCGATATTCGGGAGGCTGAAAAGAGATGCAAGG
TACTAGATGGAGATAACGTGAAAGACGATGACGGGAATCCTTTGCTGCAG
GAAGCTAAAGGCATGACCTATCTCGAAGTAGCGTATATCATTCCTCATTC
TCTCATGTCTCATAGTGACATACATATTGCTGGAGAATCGAAATTAATGG
CTTCTCCGCTCCACCGACATTGCTCATCCTTGGATGAAGTCATCTTTCCC
GACCAGCAATGCTTGACACCAGAAGAGCATGATAAAGCCACGAAGCTTTT
TGACAAGCTAATTGAACGTTTCGAGCCTTTACAGACATCGAACAAAGATT
ATAGACCACTAACACTTATACGCCTCACGAAAGAGGAGGTCTCTGCTGAA
GATGAGTTCCTGATCCTCTTCTTCACTCTCATCGAACACGATCATCTTGG
AGTCACAACAGCAATCAGAGTAGCTGAGGTCCTAGGAAGGTTACGCACTT
TTGAGAGATGGACTTCCGAAGAGCAAAACATCCTTCTTCAATGTTTAGTC
CACTTCGCCGATTATCTGATAGATAATTTCTTCTTACCACGCTACTCACA
AGATCCTAATGATGTTCGACCCAAAAACTATTTCCCTCATCAACAAAACC
AACATTAACCAACAACTTCTAAACACGCTAACCTTAACTCACGACCTTCA
TCAATCATTTCGTGCTTTCGAGATCACTTTTGAACAAGTCCAGGATCATC
CACACACATACACAATCAACTATATCGACCCAAACCGCATGTTCCGAATC
CATAGACTTCCTATCACCCGCACGCTCTATGCCACCCCCAACGGAAGTAT
AGAACCACCATCCCCTCAACTTCTGGAAGTCCATCATTCTATCGGGCGCA
TTCTTCACTTCAGTGCTGCCGGCGAATATCTCGATAAATTCATCCAAGAC
ATGGAAGAAATGGAAGAAGGAGGGGGAATCTGCTCGAATGGGTCTACTCG
CGTTGATGATTATGTTCGGTATAAACTTACAACAATTGGACTTTAATTAA
ACTAACAGCCGCGAAGGCTACTCAACCTACGATGATAGATTCATTAGAAC
CAACTATTGGCACTCCACAGCACATCCCTGATCTACGACAAGCCTGTCTC
ACGCGTGACCGCCATCGATGTGTCGTGACCCGAAAGTTCGATATTCGGGA
GGCTGAAAAGAGATGCAAGGTACTAGATGGAGATAACGTGAAAGACGATG
ACGGGAATCCTTTGCTGCAGGAAGCTAAAGGCATGACCTATCTCGAAGTA
GCGTATATCATTCCTCATTCTCTCATGTCTCATAGTGACATACATATTGC
TGGAGAATCGAAATTAATGGCTTCTCCGCTCCACCGACATTGCTCATCCT
TGGATGAAGTCATCTTTCCCGACCAGCAATGCTTGACACCAGAAGAGCAT
GATAAAGCCACGAAGCTTTTTGACAAGCTAATTGAACGTTTCGAGCCTTT
ACAGACATCGAACAAAGATTATAGACCACTAACACTTATACGCCTCACGA
AAGAGGAGGTCTCTGCTGAAGATGAGTTCCTGATCCTCTTCTTCACTCTC
ATCGAACACGATCATCTTGGAGTCACAACAGCAATCAGAGTAGCTGAGGT
CCTAGGAAGGTTACGCACTTTTGAGAGATGGACTTCCGAAGAGCAAAACA
TCCTTCTTCAATGTTTAGTCCACTTCGCCGATTATCTGATAGATAATTTC
TTCTTACCAC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_1615CAN33_1615Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1615-T1CAN33_1615-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1615-T1.cdsCAN33_1615-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1615-T1.exon3CAN33_1615-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_1615-T1.exon2CAN33_1615-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_1615-T1.exon1CAN33_1615-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR003615
DBxrefPFAM:PF13391
ProductHNH endonuclease family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:955894..957160 -
Powered by Drupal