You are here

Home

CAN33_16170-T1, CAN33_16170-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_16170-T1
Unique NameCAN33_16170-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:42234..43106+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_16170-T1 ID=CAN33_16170-T1|Name=CAN33_16170-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=873bp|location=Sequence derived from alignment at NKJJ01000011.1:42234..43106+ (Aspergillus niger FDAARGOS_311)
ATGGCACTACAGACTGGAGCGAGACATTACACGCAAGGCTACTCTAGCAA
TACGGTCGCAACCCAACAGGCACGCACAGCGGAGTCAGAAGCTGCCTTTC
TTCTACCACACCTTAGAACCACGGATTACATCCTCGACGTTGGCTGTGGG
CCTGGCACCATAACAATAGGATTTACCAGGTATGCTACCAAAGGCAGGAC
AACTGGCATCGACATATCACCAGATGTTCTGCGGAAAGCGAAGAGTATGG
CAGCTGAGGCCGGTTGTTCTATGAAGTGGGAACAGCCAGGCTCCGTTATC
TTCGAGGAAGGCGACATTCTGAAGGGGCTGCCGTACCCGGATGAGACATT
TGATGTCGTCTACTGTGCTCAAGTTTTCGGATATTTGCCGCCGCCAGACC
TGCCTTTCAGGGCGCTGTCCGAAATGCGACGAGTCCTAAAGCCCGGTGGT
ATCATCGCCACGCGTGATGGAGTAGATCAGCATTTCTACCCGCGGAGCCT
TAATTTAGATCGCCTATGGGTACAGAATTTCAATCGCGCTGTGCATTGGT
CTGACGGGTGCTGGAGTCCCGACGCTGATTCCACAGCGGCCATCATGCCA
GCCCTGTTCCGCAGAGCAGGGTTCAATGCTGATGCTGGTCGCGTTCGCAT
CGGCGCCGGGACTACCTTATACTCAGGCCGAGAGACTAGAGAGTGGCTAG
CAAAGCGTGCTGAGGGTCAGTTGCAGCAGGAAGATCCCCTACGACAGAAT
TGGTTGCGTGCAGGCATCACAGAGGAGGAAATTCAGCATACACTCCTTGC
TGTGCGGAAATGGGCAGAGACCGAGGATGCGTGGTACGCGGCGCTACAGT
GTGAGATCCTCGCTTGGAAGTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000011.1:42234..43106+

>CAN33_16170-T1 ID=CAN33_16170-T1|Name=CAN33_16170-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=873bp|location=Sequence derived from alignment at NKJJ01000011.1:42234..43106+ (Aspergillus niger FDAARGOS_311)
ATGGCACTACAGACTGGAGCGAGACATTACACGCAAGGCTACTCTAGCAA
TACGGTCGCAACCCAACAGGCACGCACAGCGGAGTCAGAAGCTGCCTTTC
TTCTACCACACCTTAGAACCACGGATTACATCCTCGACGTTGGCTGTGGG
CCTGGCACCATAACAATAGGATTTACCAGGTATGCTACCAAAGGCAGGAC
AACTGGCATCGACATATCACCAGATGTTCTGCGGAAAGCGAAGAGTATGG
CAGCTGAGGCCGGTTGTTCTATGAAGTGGGAACAGCCAGGCTCCGTTATC
TTCGAGGAAGGCGACATTCTGAAGGGGCTGCCGTACCCGGATGAGACATT
TGATGTCGTCTACTGTGCTCAAGTTTTCGGATATTTGCCGCCGCCAGACC
TGCCTTTCAGGGCGCTGTCCGAAATGCGACGAGTCCTAAAGCCCGGTGGT
ATCATCGCCACGCGTGATGGAGTAGATCAGCATTTCTACCCGCGGAGCCT
TAATTTAGATCGCCTATGGGTACAGAATTTCAATCGCGCTGTGCATTGGT
CTGACGGGTGCTGGAGTCCCGACGCTGATTCCACAGCGGCCATCATGCCA
GCCCTGTTCCGCAGAGCAGGGTTCAATGCTGATGCTGGTCGCGTTCGCAT
CGGCGCCGGGACTACCTTATACTCAGGCCGAGAGACTAGAGAGTGGCTAG
CAAAGCGTGCTGAGGGTCAGTTGCAGCAGGAAGATCCCCTACGACAGAAT
TGGTTGCGTGCAGGCATCACAGAGGAGGAAATTCAGCATACACTCCTTGC
TGTGCGGAAATGGGCAGAGACCGAGGATGCGTGGTACGCGGCGCTACAGT
GTGAGATCCTCGCTTGGAAGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_16170CAN33_16170Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16170-T1.exon1CAN33_16170-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16170-T1.cdsCAN33_16170-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16170-T1CAN33_16170-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR041698
DBxrefPFAM:PF13847
DBxrefPFAM:PF13649
DBxrefPFAM:PF13489
DBxrefPFAM:PF08242
DBxrefPFAM:PF08241
ProductMethyltransferase domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:42234..43106 +
Powered by Drupal