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CAN33_16175-T1, CAN33_16175-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_16175-T1
Unique NameCAN33_16175-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:43556..45189-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_16175-T1 ID=CAN33_16175-T1|Name=CAN33_16175-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1634bp|location=Sequence derived from alignment at NKJJ01000011.1:43556..45189- (Aspergillus niger FDAARGOS_311)
ATGAATGGTGATCTCAAGCTACGCTATTTCCAAACCCTCATTAAGCTGGG
ATACAAGGAGATTGAAGTCTCTTATCCCTCTGCCTCACAGACCGAGTTCG
ATTTCACGCGATACCTCATAAGTACCCCTGGTATTGTGCCCGATGACACG
TGGATCCAAGTCATGGCGCCTTGTCGCGACGAACTCATTCAAAGAACGAT
TGAGGCCGTCCGGGGTGCGAGGAAAGTCGTTCTGCACATACATCTCTCTA
CATCCGATCTTTTCCGCGAAATCGTCTATCTAATGACAAAGAAAGAGATG
ATAGACCTTGCTGTTCGGTGCATGAGGATGATTCGCGAACTCACGAAAGA
CTCCCTAGATGCCGAGATGCGGAAAACTGAATGGACGATGGAATTTACCT
TGGAAAACTTTCAAGATACATCCGTTGAATTTGCACTTGAAATCTGCGAA
GCTGTGAAAGCAGCCTGGGAGCCGACCACTGAGAATAAAATCATTTTCAA
TCTTCCTTCAACTGTCGAGATATCTATGCCGAACGTCTTCGCAGACCAGA
TCGAGCTCTTCTGTAGGGGTATCTCCGAGCGAGAAAAGGTTTGTGTATCA
GTTCATCCTCACAATGACCGGGGATGTGGCGTGGCGGCAGCCGAGATGGC
TCAGCTGGCTGGTGCAGATCGAGTTGAAGGATGTCTATTCGGGAATGGCG
AACGCACTGGAAACGTTGATCTCGTCACGCTGGCTCTGAATTTATATACT
CAGGGCATATCACCCAGAGTTAACCTGGGCAATTTGAATGAGGTTGTCGC
GATGGTAGAGGACTGCACTAAGATCCCCATCCATCCTAGAGCTCCCTATG
CAGGAAAGTATGTGTTTTGCACATTTACCGGTACGCACCAGGACGCTATT
CGAAAGGGATATAACCAGCTCCAAGAGAGTGAGAAACATGATGCTACACA
GACCCCCAAGTGGAGAATGCCATATTTACCAATGGATCCAGCTGATCTGG
GAAGGCAACACGAAGCTATTGTGAGGGTGAACTCGCAAAGTGGGAAAAGT
GGCGTTGCCTGGCTTCTCGAGGAGAGTTTCCACATTCATATGCCCCGAGA
GTTAGAAATTGAGTTCACAAAGATCGTCAAAACATATGCGAATATGAGTG
GTTTTGAGATTACTCAGGAGACTATCCGTCGCTTGTTCCGGGAACACTAC
ATGCATGCTGATTCTGAAAAAGCCAGGCTGTTGGATTGCAGAGCCGATGA
GACCAAAGGAGATCGGGTTGTTACACAAGTGCAACTTAAAGTTGCAGTCG
AGGGGTCCGAACACGACCTTGAAGCAACTGGAAGTGAACTATTACCGACC
ATACTCGATGCCCTGAAGCCATTGGGCTATGGCTTCGAGGCATTGGACAG
CCAAATGCAATACACAACCAACCGGGATACAATCACGAGTTTCGTTAGGC
TAGGCACATCCGAGAACTTCGCTGCATGGGGTGTCGGCATGCATAAAGAC
ACGGCGTGGGCCGTGTCACTTGCCGTAAGTAAAAAGGGCATGAACAATTG
AGCACGGCATTAACGGAATTTTAGGTTTTAGCGGCAGGCCAAAAGATGAT
GGCAGAGAAGGTCAACAGCTTCTTCTCCAACTAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:43556..45189-

>CAN33_16175-T1 ID=CAN33_16175-T1|Name=CAN33_16175-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3168bp|location=Sequence derived from alignment at NKJJ01000011.1:43556..45189- (Aspergillus niger FDAARGOS_311)
GTTTTAGCGGCAGGCCAAAAGATGATGGCAGAGAAGGTCAACAGCTTCTT
CTCCAACTAAATGAATGGTGATCTCAAGCTACGCTATTTCCAAACCCTCA
TTAAGCTGGGATACAAGGAGATTGAAGTCTCTTATCCCTCTGCCTCACAG
ACCGAGTTCGATTTCACGCGATACCTCATAAGTACCCCTGGTATTGTGCC
CGATGACACGTGGATCCAAGTCATGGCGCCTTGTCGCGACGAACTCATTC
AAAGAACGATTGAGGCCGTCCGGGGTGCGAGGAAAGTCGTTCTGCACATA
CATCTCTCTACATCCGATCTTTTCCGCGAAATCGTCTATCTAATGACAAA
GAAAGAGATGATAGACCTTGCTGTTCGGTGCATGAGGATGATTCGCGAAC
TCACGAAAGACTCCCTAGATGCCGAGATGCGGAAAACTGAATGGACGATG
GAATTTACCTTGGAAAACTTTCAAGATACATCCGTTGAATTTGCACTTGA
AATCTGCGAAGCTGTGAAAGCAGCCTGGGAGCCGACCACTGAGAATAAAA
TCATTTTCAATCTTCCTTCAACTGTCGAGATATCTATGCCGAACGTCTTC
GCAGACCAGATCGAGCTCTTCTGTAGGGGTATCTCCGAGCGAGAAAAGGT
TTGTGTATCAGTTCATCCTCACAATGACCGGGGATGTGGCGTGGCGGCAG
CCGAGATGGCTCAGCTGGCTGGTGCAGATCGAGTTGAAGGATGTCTATTC
GGGAATGGCGAACGCACTGGAAACGTTGATCTCGTCACGCTGGCTCTGAA
TTTATATACTCAGGGCATATCACCCAGAGTTAACCTGGGCAATTTGAATG
AGGTTGTCGCGATGGTAGAGGACTGCACTAAGATCCCCATCCATCCTAGA
GCTCCCTATGCAGGAAAGTATGTGTTTTGCACATTTACCGGTACGCACCA
GGACGCTATTCGAAAGGGATATAACCAGCTCCAAGAGAGTGAGAAACATG
ATGCTACACAGACCCCCAAGTGGAGAATGCCATATTTACCAATGGATCCA
GCTGATCTGGGAAGGCAACACGAAGCTATTGTGAGGGTGAACTCGCAAAG
TGGGAAAAGTGGCGTTGCCTGGCTTCTCGAGGAGAGTTTCCACATTCATA
TGCCCCGAGAGTTAGAAATTGAGTTCACAAAGATCGTCAAAACATATGCG
AATATGAGTGGTTTTGAGATTACTCAGGAGACTATCCGTCGCTTGTTCCG
GGAACACTACATGCATGCTGATTCTGAAAAAGCCAGGCTGTTGGATTGCA
GAGCCGATGAGACCAAAGGAGATCGGGTTGTTACACAAGTGCAACTTAAA
GTTGCAGTCGAGGGGTCCGAACACGACCTTGAAGCAACTGGAAGTGAACT
ATTACCGACCATACTCGATGCCCTGAAGCCATTGGGCTATGGCTTCGAGG
CATTGGACAGCCAAATGCAATACACAACCAACCGGGATACAATCACGAGT
TTCGTTAGGCTAGGCACATCCGAGAACTTCGCTGCATGGGGTGTCGGCAT
GCATAAAGACACGGCGTGGGCCGTGTCACTTGCCGTTTTAGCGGCAGGCC
AAAAGATGATGGCAGAGAAGGTCAACAGCTTCTTCTCCAACTAAATGAAT
GGTGATCTCAAGCTACGCTATTTCCAAACCCTCATTAAGCTGGGATACAA
GGAGATTGAAGTCTCTTATCCCTCTGCCTCACAGACCGAGTTCGATTTCA
CGCGATACCTCATAAGTACCCCTGGTATTGTGCCCGATGACACGTGGATC
CAAGTCATGGCGCCTTGTCGCGACGAACTCATTCAAAGAACGATTGAGGC
CGTCCGGGGTGCGAGGAAAGTCGTTCTGCACATACATCTCTCTACATCCG
ATCTTTTCCGCGAAATCGTCTATCTAATGACAAAGAAAGAGATGATAGAC
CTTGCTGTTCGGTGCATGAGGATGATTCGCGAACTCACGAAAGACTCCCT
AGATGCCGAGATGCGGAAAACTGAATGGACGATGGAATTTACCTTGGAAA
ACTTTCAAGATACATCCGTTGAATTTGCACTTGAAATCTGCGAAGCTGTG
AAAGCAGCCTGGGAGCCGACCACTGAGAATAAAATCATTTTCAATCTTCC
TTCAACTGTCGAGATATCTATGCCGAACGTCTTCGCAGACCAGATCGAGC
TCTTCTGTAGGGGTATCTCCGAGCGAGAAAAGGTTTGTGTATCAGTTCAT
CCTCACAATGACCGGGGATGTGGCGTGGCGGCAGCCGAGATGGCTCAGCT
GGCTGGTGCAGATCGAGTTGAAGGATGTCTATTCGGGAATGGCGAACGCA
CTGGAAACGTTGATCTCGTCACGCTGGCTCTGAATTTATATACTCAGGGC
ATATCACCCAGAGTTAACCTGGGCAATTTGAATGAGGTTGTCGCGATGGT
AGAGGACTGCACTAAGATCCCCATCCATCCTAGAGCTCCCTATGCAGGAA
AGTATGTGTTTTGCACATTTACCGGTACGCACCAGGACGCTATTCGAAAG
GGATATAACCAGCTCCAAGAGAGTGAGAAACATGATGCTACACAGACCCC
CAAGTGGAGAATGCCATATTTACCAATGGATCCAGCTGATCTGGGAAGGC
AACACGAAGCTATTGTGAGGGTGAACTCGCAAAGTGGGAAAAGTGGCGTT
GCCTGGCTTCTCGAGGAGAGTTTCCACATTCATATGCCCCGAGAGTTAGA
AATTGAGTTCACAAAGATCGTCAAAACATATGCGAATATGAGTGGTTTTG
AGATTACTCAGGAGACTATCCGTCGCTTGTTCCGGGAACACTACATGCAT
GCTGATTCTGAAAAAGCCAGGCTGTTGGATTGCAGAGCCGATGAGACCAA
AGGAGATCGGGTTGTTACACAAGTGCAACTTAAAGTTGCAGTCGAGGGGT
CCGAACACGACCTTGAAGCAACTGGAAGTGAACTATTACCGACCATACTC
GATGCCCTGAAGCCATTGGGCTATGGCTTCGAGGCATTGGACAGCCAAAT
GCAATACACAACCAACCGGGATACAATCACGAGTTTCGTTAGGCTAGGCA
CATCCGAGAACTTCGCTGCATGGGGTGTCGGCATGCATAAAGACACGGCG
TGGGCCGTGTCACTTGCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0019752carboxylic acid metabolic process
GO:0009098leucine biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0046912transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
GO:0003824catalytic activity
GO:00038522-isopropylmalate synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_16175CAN33_16175Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16175-T1CAN33_16175-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16175-T1.cdsCAN33_16175-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16175-T1.exon2CAN33_16175-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_16175-T1.exon1CAN33_16175-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036230
DBxrefInterPro:IPR002034
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR000891
DBxrefInterPro:IPR013709
DBxrefPFAM:PF08502
DBxrefPFAM:PF00682
ProductHMGL-like family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:43556..45189 -
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