You are here

Home

CAN33_16180-T1, CAN33_16180-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_16180-T1
Unique NameCAN33_16180-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:46298..47826+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_16180-T1 ID=CAN33_16180-T1|Name=CAN33_16180-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1529bp|location=Sequence derived from alignment at NKJJ01000011.1:46298..47826+ (Aspergillus niger FDAARGOS_311)
ATGGCAGCAGATCAGAACGAGTCATCAACTGTTGATGCAGTCACTGAGAG
GCCTGCGCCACCGTATACGATCTTTGATAGATCTCAGAAGCGTCTGTTGG
CGGTGCTTGTTTCCGCTGCTGCTACATGTAAGTCACTGTCTATCCACATT
ATAATACTGCAGACACCTCTAATAATTCAGTCTCGACACTGGCGTCAAAC
ATTTATTTCCCTGCTATTCCATCCATATCCCGCAGTCTCAATGTCTCTAC
TGAGCTCGTCAACCTTTCCATTACCTCCTACCTTATCTTCCAGGGCCTAG
CGCCTAGCCTCTGGGGTCCAATCTCAGACGTCAAAGGTCGCCGAATAGCA
TACATCGGTACCCTATTTGTAGCAGTCTGTGCCTGCATTGGTCTCGCAGA
GACCAGGAATTATACTATGCTTATCATTTTTCGGTGCTTGCAAAGTACTG
GGTCTGCTAGTACTGTTGCTATCGGATCAGGTGTGATTGGCGATATTACG
ACCCGTGAAGATCGTGGGGGATTCATGGGTTTTTTTCAAGGAATGATGTT
GGTTTCCATTGCTATTGGGCCTGTTATCGGGGGAGCGCTTGCAGGGTCGA
TTGGATGGAGAACTATCTTTTGGTTTCTCACTGTTTACAGCGGGGTACTG
CTTACCATGATAGGGTTGTTGCTTCCTGAGACGTTGAGGTCAATCGTGGG
AAATGGTGGTCAACTTCCTTCCCCAAGGATCGGGCGTTATCCCCTTGCTC
TCTATCAGCGCTTCAGTAAAACGAATTGGCGTGAGACTGTGGAATATAAC
CGGCTGGCCCCCAAGAAACGAACCGAACTTTTAGGACCCCTCCGCATCTT
GATCAGCAAACAGGCCGCCCCGCTGGTACTTTTCTTTGCCATTTACTTCG
CTGTGTGGCAAATGACGATTACGGCTATGGCAACTCTCTTCAAAGAACAC
TATGGATTGACAGAAATTCAGTCCGGATTAACCTTCATCGCTAATGGTGC
GGGCTCTATGTTCGGGACCCTCATCACAGGTAGGATCCTCGACAAGGATT
ATCGCCGGTTCAGAGAACAAGAACTTGCAGAAACATCACCCTCAAGACAG
GAGAAATTATTTCCACTTGAACGAGCCCGTCTTCGTCTGGTTCCCATCTT
CGCTGGCCTACAATGTTTATCAGTCATGATATTTGGCTGGACTGTTCAAT
ATTCGTCCCACGTCCACATCGCCGTTCCCATTATCTCAACGTTTATTACC
GGGTGGACAGCTGTGTCCAATCAATCGATAGTGACGACTTATTTAGTTGA
TGTATTCCATGATAGTAGTGCAGCTGCGAGCGCAAGTCTGAATATGGCCC
GTTGCTGTCTTGCGGCTGCGGGCTCGGGATTTGTGATGCCCATGGTGAAT
CGTGTTGGATGCGGAGTGGCTTTCACCGTATGTGTTGCAGCACAGATATT
TGCGAATACTGGCTTGTGGATACAGTGGAGGTATGGTGGTCTTTGGAGGA
GTGAGATGGAGAAGAAGTGGAGTCGGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000011.1:46298..47826+

>CAN33_16180-T1 ID=CAN33_16180-T1|Name=CAN33_16180-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3510bp|location=Sequence derived from alignment at NKJJ01000011.1:46298..47826+ (Aspergillus niger FDAARGOS_311)
ATGGCAGCAGATCAGAACGAGTCATCAACTGTTGATGCAGTCACTGAGAG
GCCTGCGCCACCGTATACGATCTTTGATAGATCTCAGAAGCGTCTGTTGG
CGGTGCTTGTTTCCGCTGCTGCTACATTCTCGACACTGGCGTCAAACATT
TATTTCCCTGCTATTCCATCCATATCCCGCAGTCTCAATGTCTCTACTGA
GCTCGTCAACCTTTCCATTACCTCCTACCTTATCTTCCAGGGCCTAGCGC
CTAGCCTCTGGGGTCCAATCTCAGACGTCAAAGGTCGCCGAATAGCATAC
ATCGGGTTGTTGCTTCCTGAGACGTTGAGGTCAATCGTGGGAAATGGTGG
TCAACTTCCTTCCCCAAGGATCGGGCGTTATCCCCTTGCTCTCTATCAGC
GCTTCAGTAAAACGAATTGGCGTGAGACTGTGGAATATAACCGGCTGGCC
CCCAAGAAACGAACCGAACTTTTAGGACCCCTCCGCATCTTGATCAGCAA
ACAGGCCGCCCCGCTGGTACTTTTCTTTGCCATTTACTTCGCTGTGTGGC
AAATGACGATTACGGCTATGGCAACTCTCTTCAAAGAACACTATGGATTG
ACAGAAATTCAGTCCGGATTAACCTTCATCGCTAATGGTGCGGGCTCTAT
GTTCGGGACCCTCATCACAGGTAGGATCCTCGACAAGGATTATCGCCGGT
TCAGAGAACAAGAACTTGCAGAAACATCACCCTCAAGACAGGAGAAATTA
TTTCCACTTGAACGAGCCCGTCTTCGTCTGGTTCCCATCTTCGCTGGCCT
ACAATGTTTATCAGTCATGATATTTGGCTGGACTGTTCAATATTCGTCCC
ACGTCCACATCGCCGTTCCCATTATCTCAACGTTTATTACCGGGTGGACA
GCTGTGTCCAATCAATCGATAGTGACGACTTATTTAGTTGATGTATTCCA
TGATAGTAGTGCAGCTGCGAGCGCAAGTCTGAATATGGCCCGTTGCTGTC
TTGCGGCTGCGGGCTCGGGATTTGTGATGCCCATGGTGAATCGTGTTGGA
TGCGGAGTGGCTTTCACCGTATGTGTTGCAGCACAGATATTTGCGAATAC
TGGCTTGTGGATACAGTGGAGGTATGGTGGTCTTTGGAGGAGTGAGATGG
AGAAGAAGTGGAGTCGGTGAATGGCAGCAGATCAGAACGAGTCATCAACT
GTTGATGCAGTCACTGAGAGGCCTGCGCCACCGTATACGATCTTTGATAG
ATCTCAGAAGCGTCTGTTGGCGGTGCTTGTTTCCGCTGCTGCTACATTCT
CGACACTGGCGTCAAACATTTATTTCCCTGCTATTCCATCCATATCCCGC
AGTCTCAATGTCTCTACTGAGCTCGTCAACCTTTCCATTACCTCCTACCT
TATCTTCCAGGGCCTAGCGCCTAGCCTCTGGGGTCCAATCTCAGACGTCA
AAGGTCGCCGAATAGCATACATCGGGTTGTTGCTTCCTGAGACGTTGAGG
TCAATCGTGGGAAATGGTGGTCAACTTCCTTCCCCAAGGATCGGGCGTTA
TCCCCTTGCTCTCTATCAGCGCTTCAGTAAAACGAATTGGCGTGAGACTG
TGGAATATAACCGGCTGGCCCCCAAGAAACGAACCGAACTTTTAGGACCC
CTCCGCATCTTGATCAGCAAACAGGCCGCCCCGCTGGTACTTTTCTTTGC
CATTTACTTCGCTGTGTGGCAAATGACGATTACGGCTATGGCAACTCTCT
TCAAAGAACACTATGGATTGACAGAAATTCAGTCCGGATTAACCTTCATC
GCTAATGGTGCGGGCTCTATGTTCGGGACCCTCATCACAGGTAGGATCCT
CGACAAGGATTATCGCCGGTTCAGAGAACAAGAACTTGCAGAAACATCAC
CCTCAAGACAGGAGAAATTATTTCCACTTGAACGAGCCCGTCTTCGTCTG
GTTCCCATCTTCGCTGGCCTACAATGTTTATCAGTCATGATATTTGGCTG
GACTGTTCAATATTCGTCCCACGTCCACATCGCCGTTCCCATTATCTCAA
CGTTTATTACCGGGTGGACAGCTGTGTCCAATCAATCGATAGTGACGACT
TATTTAGTTGATGTATTCCATGATAGTAGTGCAGCTGCGAGCGCAAGTCT
GAATATGGCCCGTTGCTGTCTTGCGGCTGCGGGCTCGGGATTTGTGATGC
CCATGGTGAATCGTGTTGGATGCGGAGTGGCTTTCACCGTATGTGTTGCA
GCACAGATATTTGCGAATACTGGCTTGTGGATACAGTGGAGGTATGGTGG
TCTTTGGAGGAGTGAGATGGAGAAGAAGTGGAGTCGGTGAATGGCAGCAG
ATCAGAACGAGTCATCAACTGTTGATGCAGTCACTGAGAGGCCTGCGCCA
CCGTATACGATCTTTGATAGATCTCAGAAGCGTCTGTTGGCGGTGCTTGT
TTCCGCTGCTGCTACATTCTCGACACTGGCGTCAAACATTTATTTCCCTG
CTATTCCATCCATATCCCGCAGTCTCAATGTCTCTACTGAGCTCGTCAAC
CTTTCCATTACCTCCTACCTTATCTTCCAGGGCCTAGCGCCTAGCCTCTG
GGGTCCAATCTCAGACGTCAAAGGTCGCCGAATAGCATACATCGGGTTGT
TGCTTCCTGAGACGTTGAGGTCAATCGTGGGAAATGGTGGTCAACTTCCT
TCCCCAAGGATCGGGCGTTATCCCCTTGCTCTCTATCAGCGCTTCAGTAA
AACGAATTGGCGTGAGACTGTGGAATATAACCGGCTGGCCCCCAAGAAAC
GAACCGAACTTTTAGGACCCCTCCGCATCTTGATCAGCAAACAGGCCGCC
CCGCTGGTACTTTTCTTTGCCATTTACTTCGCTGTGTGGCAAATGACGAT
TACGGCTATGGCAACTCTCTTCAAAGAACACTATGGATTGACAGAAATTC
AGTCCGGATTAACCTTCATCGCTAATGGTGCGGGCTCTATGTTCGGGACC
CTCATCACAGGTAGGATCCTCGACAAGGATTATCGCCGGTTCAGAGAACA
AGAACTTGCAGAAACATCACCCTCAAGACAGGAGAAATTATTTCCACTTG
AACGAGCCCGTCTTCGTCTGGTTCCCATCTTCGCTGGCCTACAATGTTTA
TCAGTCATGATATTTGGCTGGACTGTTCAATATTCGTCCCACGTCCACAT
CGCCGTTCCCATTATCTCAACGTTTATTACCGGGTGGACAGCTGTGTCCA
ATCAATCGATAGTGACGACTTATTTAGTTGATGTATTCCATGATAGTAGT
GCAGCTGCGAGCGCAAGTCTGAATATGGCCCGTTGCTGTCTTGCGGCTGC
GGGCTCGGGATTTGTGATGCCCATGGTGAATCGTGTTGGATGCGGAGTGG
CTTTCACCGTATGTGTTGCAGCACAGATATTTGCGAATACTGGCTTGTGG
ATACAGTGGAGGTATGGTGGTCTTTGGAGGAGTGAGATGGAGAAGAAGTG
GAGTCGGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_16180CAN33_16180Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16180-T1.exon1CAN33_16180-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_16180-T1.exon2CAN33_16180-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_16180-T1.exon3CAN33_16180-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16180-T1.cdsCAN33_16180-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16180-T1CAN33_16180-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Productmajor facilitator superfamily protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:46298..47826 +
Powered by Drupal