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CAN33_1620-T1, CAN33_1620-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_1620-T1
Unique NameCAN33_1620-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:957605..959230-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_1620-T1 ID=CAN33_1620-T1|Name=CAN33_1620-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1626bp|location=Sequence derived from alignment at NKJJ01000004.1:957605..959230- (Aspergillus niger FDAARGOS_311)
ATGGCATCTTACCCAGAGAATGTCGGCATTAAGGCCATGGAGATCTATGT
CCCAGCCCAGGTAATGCAATCCTTCCTCTCCTAGGAGTCTGTCTGATTGC
CTGATCAAACAGTGTCTGGATCAAATCCTCTTCGAGAAACACCAAGGTGT
CTCAGCCGGCAAGTACACCATCGGACTGGGACTCAAGTGCATGAATTACT
GCACCGATAGAGAGGGTATGTTCTAATCAAAATACACCATCCTGTCTTTT
CAAGTACTGAGAATTCCAACTAACCAACCGTTCAGATGTTTGCTCTCTAG
CACTAACAGCCGTGTCCTCCCTCCTCAGGAAATACAGCATTGACCCCAAC
TCCATCGGTCGTCTCGAAGTAGGCACGGAATCCCTGATCGACAAGGCCAA
GTCCATCAAGTCCGTTCTTACAACCCTCTTCGAGCCTTCCGGCAACACAA
GCATTGAAGGTATTGACACTATTCACGCCTGCTACGGCGGAACTAATGCT
CTCTTCAACGCTATAAACTGGGTCGAGTCCCGGTCCTGGGACGGGCGAGA
CGCCATCGTCGTAGCATCCGACATTGCCCTCTACAAAGAGTCTTCCAGTC
GTCCTACCGGTGGTGCAGGTTGCGTTGCCATGCTCGTGGGCCCCAACGCG
CTCCTCTCCCTGGACCATAGCATTAGAGGAGTCTATATGACACACACGTA
CGACTTCTACAAACCAGACCTCAAATCAGAGTTCCCTCTCGTCAATGGCC
ATGAATCAATCACTTGCTATATCCGCGCCCTGGACGGATGCCACAAGGAC
CTCCTCCGTCGCAGAAGCGCGAACAACAAGAACGTCGAGAATGTCCTCGA
CCTCTTCGACTACATGGCCTTCCATACTCCAAACTGCAAGCTAGTCAGCA
AGTCGTACGGTCGACTCAAATATGACGACCTTCTACACCAGTCGAGCTCG
AACCCAGACACAGATCTGACTGCAATCCCACCTGAGCTCCGCACCCTGAC
CTACGAAGAATCCCTCAAAGACAAAAATCTAGAGAAGACCCTTGTAGCTC
TGACAAAAGATCAGTTCAAGAAACGGGTCGAGCCATGCATCGCTGCGCCC
TCTTTGTGTGGAAATATGTACACAGGCAGTCTCTATTGCTCACTCATCAG
CTTGATCAGTAATATCGATCTTGCCACTGCGGAGGGGAAAACTATTGGCA
TGTTTAGTGTAAGTCACACCCATGTCCCCAAATTGAACTATATATCCATC
AGTTCTAACGCATATTGTGGATAAAGTACGGCAGCGGTCTAGCCAGCACT
CTCTTCGCCTTCAAAGTAACCGGCGACCTAAACCCCATGGTTGAGAAAAT
CGATCTCATGAACCGCCTGAATCAGAGACATATCGCTACGCCCGAGGAAT
ATGAAGAGGTAAGCCAACAGAATTATGTAGCTTTCTCGATCCTTTGGTGA
TCAAGTTGTTGCTCTATACTGATACAGTGTATATCAAGGCCTGTACACTC
CGACTGAAAGCCTACGGAAGCAATGACTATACTCCATCTGGAGACATAGC
CTCCCTAGCACCGGGAACATACTACTTGGAGAAAATTGATGAGGTGTATC
GGCGGACTTATGCTATCAAATCTTGA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:957605..959230-

>CAN33_1620-T1 ID=CAN33_1620-T1|Name=CAN33_1620-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6780bp|location=Sequence derived from alignment at NKJJ01000004.1:957605..959230- (Aspergillus niger FDAARGOS_311)
GCCTGTACACTCCGACTGAAAGCCTACGGAAGCAATGACTATACTCCATC
TGGAGACATAGCCTCCCTAGCACCGGGAACATACTACTTGGAGAAAATTG
ATGAGGTGTATCGGCGGACTTATGCTATCAAATCTTGATACGGCAGCGGT
CTAGCCAGCACTCTCTTCGCCTTCAAAGTAACCGGCGACCTAAACCCCAT
GGTTGAGAAAATCGATCTCATGAACCGCCTGAATCAGAGACATATCGCTA
CGCCCGAGGAATATGAAGAGATGTTTGCTCTCTAGCACTAACAGCCGTGT
CCTCCCTCCTCAGGAAATACAGCATTGACCCCAACTCCATCGGTCGTCTC
GAAGTAGGCACGGAATCCCTGATCGACAAGGCCAAGTCCATCAAGTCCGT
TCTTACAACCCTCTTCGAGCCTTCCGGCAACACAAGCATTGAAGGTATTG
ACACTATTCACGCCTGCTACGGCGGAACTAATGCTCTCTTCAACGCTATA
AACTGGGTCGAGTCCCGGTCCTGGGACGGGCGAGACGCCATCGTCGTAGC
ATCCGACATTGCCCTCTACAAAGAGTCTTCCAGTCGTCCTACCGGTGGTG
CAGGTTGCGTTGCCATGCTCGTGGGCCCCAACGCGCTCCTCTCCCTGGAC
CATAGCATTAGAGGAGTCTATATGACACACACGTACGACTTCTACAAACC
AGACCTCAAATCAGAGTTCCCTCTCGTCAATGGCCATGAATCAATCACTT
GCTATATCCGCGCCCTGGACGGATGCCACAAGGACCTCCTCCGTCGCAGA
AGCGCGAACAACAAGAACGTCGAGAATGTCCTCGACCTCTTCGACTACAT
GGCCTTCCATACTCCAAACTGCAAGCTAGTCAGCAAGTCGTACGGTCGAC
TCAAATATGACGACCTTCTACACCAGTCGAGCTCGAACCCAGACACAGAT
CTGACTGCAATCCCACCTGAGCTCCGCACCCTGACCTACGAAGAATCCCT
CAAAGACAAAAATCTAGAGAAGACCCTTGTAGCTCTGACAAAAGATCAGT
TCAAGAAACGGGTCGAGCCATGCATCGCTGCGCCCTCTTTGTGTGGAAAT
ATGTACACAGGCAGTCTCTATTGCTCACTCATCAGCTTGATCAGTAATAT
CGATCTTGCCACTGCGGAGGGGAAAACTATTGGCATGTTTAGTTGTCTGG
ATCAAATCCTCTTCGAGAAACACCAAGGTGTCTCAGCCGGCAAGTACACC
ATCGGACTGGGACTCAAGTGCATGAATTACTGCACCGATAGAGAGGATGG
CATCTTACCCAGAGAATGTCGGCATTAAGGCCATGGAGATCTATGTCCCA
GCCCAGGCCTGTACACTCCGACTGAAAGCCTACGGAAGCAATGACTATAC
TCCATCTGGAGACATAGCCTCCCTAGCACCGGGAACATACTACTTGGAGA
AAATTGATGAGGTGTATCGGCGGACTTATGCTATCAAATCTTGATACGGC
AGCGGTCTAGCCAGCACTCTCTTCGCCTTCAAAGTAACCGGCGACCTAAA
CCCCATGGTTGAGAAAATCGATCTCATGAACCGCCTGAATCAGAGACATA
TCGCTACGCCCGAGGAATATGAAGAGATGTTTGCTCTCTAGCACTAACAG
CCGTGTCCTCCCTCCTCAGGAAATACAGCATTGACCCCAACTCCATCGGT
CGTCTCGAAGTAGGCACGGAATCCCTGATCGACAAGGCCAAGTCCATCAA
GTCCGTTCTTACAACCCTCTTCGAGCCTTCCGGCAACACAAGCATTGAAG
GTATTGACACTATTCACGCCTGCTACGGCGGAACTAATGCTCTCTTCAAC
GCTATAAACTGGGTCGAGTCCCGGTCCTGGGACGGGCGAGACGCCATCGT
CGTAGCATCCGACATTGCCCTCTACAAAGAGTCTTCCAGTCGTCCTACCG
GTGGTGCAGGTTGCGTTGCCATGCTCGTGGGCCCCAACGCGCTCCTCTCC
CTGGACCATAGCATTAGAGGAGTCTATATGACACACACGTACGACTTCTA
CAAACCAGACCTCAAATCAGAGTTCCCTCTCGTCAATGGCCATGAATCAA
TCACTTGCTATATCCGCGCCCTGGACGGATGCCACAAGGACCTCCTCCGT
CGCAGAAGCGCGAACAACAAGAACGTCGAGAATGTCCTCGACCTCTTCGA
CTACATGGCCTTCCATACTCCAAACTGCAAGCTAGTCAGCAAGTCGTACG
GTCGACTCAAATATGACGACCTTCTACACCAGTCGAGCTCGAACCCAGAC
ACAGATCTGACTGCAATCCCACCTGAGCTCCGCACCCTGACCTACGAAGA
ATCCCTCAAAGACAAAAATCTAGAGAAGACCCTTGTAGCTCTGACAAAAG
ATCAGTTCAAGAAACGGGTCGAGCCATGCATCGCTGCGCCCTCTTTGTGT
GGAAATATGTACACAGGCAGTCTCTATTGCTCACTCATCAGCTTGATCAG
TAATATCGATCTTGCCACTGCGGAGGGGAAAACTATTGGCATGTTTAGTT
GTCTGGATCAAATCCTCTTCGAGAAACACCAAGGTGTCTCAGCCGGCAAG
TACACCATCGGACTGGGACTCAAGTGCATGAATTACTGCACCGATAGAGA
GGATGGCATCTTACCCAGAGAATGTCGGCATTAAGGCCATGGAGATCTAT
GTCCCAGCCCAGGCCTGTACACTCCGACTGAAAGCCTACGGAAGCAATGA
CTATACTCCATCTGGAGACATAGCCTCCCTAGCACCGGGAACATACTACT
TGGAGAAAATTGATGAGGTGTATCGGCGGACTTATGCTATCAAATCTTGA
TACGGCAGCGGTCTAGCCAGCACTCTCTTCGCCTTCAAAGTAACCGGCGA
CCTAAACCCCATGGTTGAGAAAATCGATCTCATGAACCGCCTGAATCAGA
GACATATCGCTACGCCCGAGGAATATGAAGAGATGTTTGCTCTCTAGCAC
TAACAGCCGTGTCCTCCCTCCTCAGGAAATACAGCATTGACCCCAACTCC
ATCGGTCGTCTCGAAGTAGGCACGGAATCCCTGATCGACAAGGCCAAGTC
CATCAAGTCCGTTCTTACAACCCTCTTCGAGCCTTCCGGCAACACAAGCA
TTGAAGGTATTGACACTATTCACGCCTGCTACGGCGGAACTAATGCTCTC
TTCAACGCTATAAACTGGGTCGAGTCCCGGTCCTGGGACGGGCGAGACGC
CATCGTCGTAGCATCCGACATTGCCCTCTACAAAGAGTCTTCCAGTCGTC
CTACCGGTGGTGCAGGTTGCGTTGCCATGCTCGTGGGCCCCAACGCGCTC
CTCTCCCTGGACCATAGCATTAGAGGAGTCTATATGACACACACGTACGA
CTTCTACAAACCAGACCTCAAATCAGAGTTCCCTCTCGTCAATGGCCATG
AATCAATCACTTGCTATATCCGCGCCCTGGACGGATGCCACAAGGACCTC
CTCCGTCGCAGAAGCGCGAACAACAAGAACGTCGAGAATGTCCTCGACCT
CTTCGACTACATGGCCTTCCATACTCCAAACTGCAAGCTAGTCAGCAAGT
CGTACGGTCGACTCAAATATGACGACCTTCTACACCAGTCGAGCTCGAAC
CCAGACACAGATCTGACTGCAATCCCACCTGAGCTCCGCACCCTGACCTA
CGAAGAATCCCTCAAAGACAAAAATCTAGAGAAGACCCTTGTAGCTCTGA
CAAAAGATCAGTTCAAGAAACGGGTCGAGCCATGCATCGCTGCGCCCTCT
TTGTGTGGAAATATGTACACAGGCAGTCTCTATTGCTCACTCATCAGCTT
GATCAGTAATATCGATCTTGCCACTGCGGAGGGGAAAACTATTGGCATGT
TTAGTTGTCTGGATCAAATCCTCTTCGAGAAACACCAAGGTGTCTCAGCC
GGCAAGTACACCATCGGACTGGGACTCAAGTGCATGAATTACTGCACCGA
TAGAGAGGATGGCATCTTACCCAGAGAATGTCGGCATTAAGGCCATGGAG
ATCTATGTCCCAGCCCAGGCCTGTACACTCCGACTGAAAGCCTACGGAAG
CAATGACTATACTCCATCTGGAGACATAGCCTCCCTAGCACCGGGAACAT
ACTACTTGGAGAAAATTGATGAGGTGTATCGGCGGACTTATGCTATCAAA
TCTTGATACGGCAGCGGTCTAGCCAGCACTCTCTTCGCCTTCAAAGTAAC
CGGCGACCTAAACCCCATGGTTGAGAAAATCGATCTCATGAACCGCCTGA
ATCAGAGACATATCGCTACGCCCGAGGAATATGAAGAGATGTTTGCTCTC
TAGCACTAACAGCCGTGTCCTCCCTCCTCAGGAAATACAGCATTGACCCC
AACTCCATCGGTCGTCTCGAAGTAGGCACGGAATCCCTGATCGACAAGGC
CAAGTCCATCAAGTCCGTTCTTACAACCCTCTTCGAGCCTTCCGGCAACA
CAAGCATTGAAGGTATTGACACTATTCACGCCTGCTACGGCGGAACTAAT
GCTCTCTTCAACGCTATAAACTGGGTCGAGTCCCGGTCCTGGGACGGGCG
AGACGCCATCGTCGTAGCATCCGACATTGCCCTCTACAAAGAGTCTTCCA
GTCGTCCTACCGGTGGTGCAGGTTGCGTTGCCATGCTCGTGGGCCCCAAC
GCGCTCCTCTCCCTGGACCATAGCATTAGAGGAGTCTATATGACACACAC
GTACGACTTCTACAAACCAGACCTCAAATCAGAGTTCCCTCTCGTCAATG
GCCATGAATCAATCACTTGCTATATCCGCGCCCTGGACGGATGCCACAAG
GACCTCCTCCGTCGCAGAAGCGCGAACAACAAGAACGTCGAGAATGTCCT
CGACCTCTTCGACTACATGGCCTTCCATACTCCAAACTGCAAGCTAGTCA
GCAAGTCGTACGGTCGACTCAAATATGACGACCTTCTACACCAGTCGAGC
TCGAACCCAGACACAGATCTGACTGCAATCCCACCTGAGCTCCGCACCCT
GACCTACGAAGAATCCCTCAAAGACAAAAATCTAGAGAAGACCCTTGTAG
CTCTGACAAAAGATCAGTTCAAGAAACGGGTCGAGCCATGCATCGCTGCG
CCCTCTTTGTGTGGAAATATGTACACAGGCAGTCTCTATTGCTCACTCAT
CAGCTTGATCAGTAATATCGATCTTGCCACTGCGGAGGGGAAAACTATTG
GCATGTTTAGTTGTCTGGATCAAATCCTCTTCGAGAAACACCAAGGTGTC
TCAGCCGGCAAGTACACCATCGGACTGGGACTCAAGTGCATGAATTACTG
CACCGATAGAGAGGATGGCATCTTACCCAGAGAATGTCGGCATTAAGGCC
ATGGAGATCTATGTCCCAGCCCAGGCCTGTACACTCCGACTGAAAGCCTA
CGGAAGCAATGACTATACTCCATCTGGAGACATAGCCTCCCTAGCACCGG
GAACATACTACTTGGAGAAAATTGATGAGGTGTATCGGCGGACTTATGCT
ATCAAATCTTGATACGGCAGCGGTCTAGCCAGCACTCTCTTCGCCTTCAA
AGTAACCGGCGACCTAAACCCCATGGTTGAGAAAATCGATCTCATGAACC
GCCTGAATCAGAGACATATCGCTACGCCCGAGGAATATGAAGAGATGTTT
GCTCTCTAGCACTAACAGCCGTGTCCTCCCTCCTCAGGAAATACAGCATT
GACCCCAACTCCATCGGTCGTCTCGAAGTAGGCACGGAATCCCTGATCGA
CAAGGCCAAGTCCATCAAGTCCGTTCTTACAACCCTCTTCGAGCCTTCCG
GCAACACAAGCATTGAAGGTATTGACACTATTCACGCCTGCTACGGCGGA
ACTAATGCTCTCTTCAACGCTATAAACTGGGTCGAGTCCCGGTCCTGGGA
CGGGCGAGACGCCATCGTCGTAGCATCCGACATTGCCCTCTACAAAGAGT
CTTCCAGTCGTCCTACCGGTGGTGCAGGTTGCGTTGCCATGCTCGTGGGC
CCCAACGCGCTCCTCTCCCTGGACCATAGCATTAGAGGAGTCTATATGAC
ACACACGTACGACTTCTACAAACCAGACCTCAAATCAGAGTTCCCTCTCG
TCAATGGCCATGAATCAATCACTTGCTATATCCGCGCCCTGGACGGATGC
CACAAGGACCTCCTCCGTCGCAGAAGCGCGAACAACAAGAACGTCGAGAA
TGTCCTCGACCTCTTCGACTACATGGCCTTCCATACTCCAAACTGCAAGC
TAGTCAGCAAGTCGTACGGTCGACTCAAATATGACGACCTTCTACACCAG
TCGAGCTCGAACCCAGACACAGATCTGACTGCAATCCCACCTGAGCTCCG
CACCCTGACCTACGAAGAATCCCTCAAAGACAAAAATCTAGAGAAGACCC
TTGTAGCTCTGACAAAAGATCAGTTCAAGAAACGGGTCGAGCCATGCATC
GCTGCGCCCTCTTTGTGTGGAAATATGTACACAGGCAGTCTCTATTGCTC
ACTCATCAGCTTGATCAGTAATATCGATCTTGCCACTGCGGAGGGGAAAA
CTATTGGCATGTTTAGTTGTCTGGATCAAATCCTCTTCGAGAAACACCAA
GGTGTCTCAGCCGGCAAGTACACCATCGGACTGGGACTCAAGTGCATGAA
TTACTGCACCGATAGAGAGGATGGCATCTTACCCAGAGAATGTCGGCATT
AAGGCCATGGAGATCTATGTCCCAGCCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004421hydroxymethylglutaryl-CoA synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_1620CAN33_1620Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1620-T1CAN33_1620-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1620-T1.cdsCAN33_1620-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1620-T1.exon5CAN33_1620-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_1620-T1.exon4CAN33_1620-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_1620-T1.exon3CAN33_1620-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_1620-T1.exon2CAN33_1620-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_1620-T1.exon1CAN33_1620-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR016039
DBxrefInterPro:IPR010122
DBxrefInterPro:IPR013746
DBxrefInterPro:IPR013528
DBxrefPFAM:PF01154
DBxrefPFAM:PF08540
Producthydroxymethylglutaryl-CoA synthase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:957605..959230 -
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