You are here

Home

CAN33_16220-T1, CAN33_16220-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_16220-T1
Unique NameCAN33_16220-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:75299..77032-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_16220-T1 ID=CAN33_16220-T1|Name=CAN33_16220-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1734bp|location=Sequence derived from alignment at NKJJ01000011.1:75299..77032- (Aspergillus niger FDAARGOS_311)
ATGGATGTGTATGGAACCGCAGTCACTGCCGTCCAGCAAGTCATCCAAGT
GACCATCTTCATCAAGGGAGTCATTTCAGACGTCAGAGCTTATGACGATG
ACCGAGCCGCCATCCAGCTTCGACTGGACTTGCAGCTAACATCTCTTGAA
TTTTTTCAGCGTCGGTTCCTGGACAAGGAGCGTGGTCTACTGCTCCCAGG
GCAGCTCCCCGGCTGGGTCGCTGAGACGATATGCAACCTCTTGCTGAAGA
TGGGTCGCGTGCTGGTGGAATATCGTGCTCTAGTCAAAGAGTATGAGATC
CTGGATGCTTCAACTGCAGCTTTTGACCACGGCGACGATGCATTGCCGAA
GGGAGAAAAATGGAAACAGTCGTTCCTCGATCGGACCAAGGCCAAAGCCA
AGGCAATCAAGCTGAAAGGGTACGACTGGGCACTCTTCGATAAGAAGAAA
CTCCTGGGTGTCTTGGCTGAGTACAAAGAGTGGACCGACAGTCTGCGGGA
CTTGATGCAGCACTTCTCCCAGGAGGCCTTGTACACCCTGACGGATGGCT
CCGCAGCGAAGTCACCACCAACTGCGACCGATGTGCAAGGAACAGGACTA
GAAGAGGTGGTCAAACGACAGCAATTGGCATTCCTTCATGCTCCAGCTGA
CTTTCAGGAGCTCGAGGGTGAAATTGCCGAGTCCGACAACGCATCGGATG
GGTTTCACTTGGGCTCGTGGACGCACCAGGGCCGATCAACTCCCGTAGTC
CTGGAATTTCGCCCATATGATCGCCGCCTGCGTTATGATGACCTTGACGA
GGAGGAGATTGCAGAATTGAAGGCGCCGCTGCGAGACCTAGCCTGGCTAC
TTCAGAATTCCACGTTTTCGGCAGGCAAGAAGGATGCTGAGGTGTCCCAA
CCAACAATATACTCCCTCCAGTGCCTGGGATATAAGGATGAGACAGAAAA
GGAACGAACGGTCTTTGCGTACCGACTACCAATTCATGACACCGATGATA
AATCAACCGAAGTGCAGACCGGCCTGACGACTTTGCACAGCTTAATCAAC
CAGGTAGATCCTCAGACAAAACGACCCGCAAAGCCATCGCTGGAGGATCG
CTTCGCCATTGCGCACTGCCTCGCACTAACCACTCTCAACGTACACGGCT
CGCTCTGGTTACACAAGAACATCTGGAGTCGAGGCATTCTCTTATTCGAG
CAGAGTCAGGACAATGTCGTCGAGCCTCTGTCCAGACTGTCCCTGACCAC
ACCTGCAACATTCAACAAGGGTGGACAGCGACAACCGCGCCTTCTTGCAT
TCCTTGGTGACTGGGGTTACGCCCGACCAGTCGAAGGAGCGACCGACATG
CGCAGTGATTTCGAAATAGAACCCAACCTTTACCGCCACCCCGACCGTCA
GGGCGTTCCGACACGACAATTCTCCCGCCTCCATGATATGTACGCGTTGG
GGGTGGTACTGTTAGAGGTTGGGCTGTGGAAGACAGTGTCTCGCCTCTTT
GAAACACGCATCAAAGAGGGCCAGCGTACTCGCAAATTACCCAAGGCTCG
TGACGTTCGTGCGGCGTTAATATCGCTGGCCCAGCGTGACCTACCAAAGG
AAATGGGTAGCGCCTATGCCTCAGCGGTCGTGGCTTGTCTTAGTGGCGAT
TTCCGCAAAGGAAGTGATCTAGAACTTTCTCTGGACTTTCGCGAGAAGGT
GGTAGACTGTGTAGCTGAGGGATTGCGACTCTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000011.1:75299..77032-

>CAN33_16220-T1 ID=CAN33_16220-T1|Name=CAN33_16220-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1734bp|location=Sequence derived from alignment at NKJJ01000011.1:75299..77032- (Aspergillus niger FDAARGOS_311)
ATGGATGTGTATGGAACCGCAGTCACTGCCGTCCAGCAAGTCATCCAAGT
GACCATCTTCATCAAGGGAGTCATTTCAGACGTCAGAGCTTATGACGATG
ACCGAGCCGCCATCCAGCTTCGACTGGACTTGCAGCTAACATCTCTTGAA
TTTTTTCAGCGTCGGTTCCTGGACAAGGAGCGTGGTCTACTGCTCCCAGG
GCAGCTCCCCGGCTGGGTCGCTGAGACGATATGCAACCTCTTGCTGAAGA
TGGGTCGCGTGCTGGTGGAATATCGTGCTCTAGTCAAAGAGTATGAGATC
CTGGATGCTTCAACTGCAGCTTTTGACCACGGCGACGATGCATTGCCGAA
GGGAGAAAAATGGAAACAGTCGTTCCTCGATCGGACCAAGGCCAAAGCCA
AGGCAATCAAGCTGAAAGGGTACGACTGGGCACTCTTCGATAAGAAGAAA
CTCCTGGGTGTCTTGGCTGAGTACAAAGAGTGGACCGACAGTCTGCGGGA
CTTGATGCAGCACTTCTCCCAGGAGGCCTTGTACACCCTGACGGATGGCT
CCGCAGCGAAGTCACCACCAACTGCGACCGATGTGCAAGGAACAGGACTA
GAAGAGGTGGTCAAACGACAGCAATTGGCATTCCTTCATGCTCCAGCTGA
CTTTCAGGAGCTCGAGGGTGAAATTGCCGAGTCCGACAACGCATCGGATG
GGTTTCACTTGGGCTCGTGGACGCACCAGGGCCGATCAACTCCCGTAGTC
CTGGAATTTCGCCCATATGATCGCCGCCTGCGTTATGATGACCTTGACGA
GGAGGAGATTGCAGAATTGAAGGCGCCGCTGCGAGACCTAGCCTGGCTAC
TTCAGAATTCCACGTTTTCGGCAGGCAAGAAGGATGCTGAGGTGTCCCAA
CCAACAATATACTCCCTCCAGTGCCTGGGATATAAGGATGAGACAGAAAA
GGAACGAACGGTCTTTGCGTACCGACTACCAATTCATGACACCGATGATA
AATCAACCGAAGTGCAGACCGGCCTGACGACTTTGCACAGCTTAATCAAC
CAGGTAGATCCTCAGACAAAACGACCCGCAAAGCCATCGCTGGAGGATCG
CTTCGCCATTGCGCACTGCCTCGCACTAACCACTCTCAACGTACACGGCT
CGCTCTGGTTACACAAGAACATCTGGAGTCGAGGCATTCTCTTATTCGAG
CAGAGTCAGGACAATGTCGTCGAGCCTCTGTCCAGACTGTCCCTGACCAC
ACCTGCAACATTCAACAAGGGTGGACAGCGACAACCGCGCCTTCTTGCAT
TCCTTGGTGACTGGGGTTACGCCCGACCAGTCGAAGGAGCGACCGACATG
CGCAGTGATTTCGAAATAGAACCCAACCTTTACCGCCACCCCGACCGTCA
GGGCGTTCCGACACGACAATTCTCCCGCCTCCATGATATGTACGCGTTGG
GGGTGGTACTGTTAGAGGTTGGGCTGTGGAAGACAGTGTCTCGCCTCTTT
GAAACACGCATCAAAGAGGGCCAGCGTACTCGCAAATTACCCAAGGCTCG
TGACGTTCGTGCGGCGTTAATATCGCTGGCCCAGCGTGACCTACCAAAGG
AAATGGGTAGCGCCTATGCCTCAGCGGTCGTGGCTTGTCTTAGTGGCGAT
TTCCGCAAAGGAAGTGATCTAGAACTTTCTCTGGACTTTCGCGAGAAGGT
GGTAGACTGTGTAGCTGAGGGATTGCGACTCTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_16220CAN33_16220Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16220-T1.cdsCAN33_16220-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16220-T1.exon1CAN33_16220-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16220-T1CAN33_16220-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000111.1
NoteEggNog:ENOG41
DBxrefInterPro:IPR011009
DBxrefInterPro:IPR029498
DBxrefPFAM:PF14479
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:75299..77032 -
Powered by Drupal