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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:294535..296258- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_16630-T1 ID=CAN33_16630-T1|Name=CAN33_16630-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1724bp|location=Sequence derived from alignment at NKJJ01000011.1:294535..296258- (Aspergillus niger FDAARGOS_311)
ATGGCGCCGTCACAGATGATCCCAGAACACTTCCCTTCGCTTCCCCAGTT
TTCACACTTCATGAAACCATCCCGTTTCGAGGGTGAGACAAACTACCTTG
AAGTGATAGGCATAATCCCACCAGAAGTGCGTGGCACATTCTACCGGGTT
ATGCCGGACCCGCATCTTCCTTCGCGAGTCGAAGATGACCCAGTATAGAC
GGCCCAGTCCTGAGTCTCGGTTTGCAAATTTCTTGCTAATTTCTTTTGTT
CAAGTGGTTCAATGGCGATGGCAACGTCAGTGCATTTCGTATTGAGTCTG
GCAAAGTACATTTCAAGCAGCGCTATGTACGCACCGAAAAGTCCATCAAA
GAATGCGAGGCAGGGAGAGCACTGCTAGGTAAATTCCCTTTCTTTTTCTT
TTCTTTTCTTTCTTCTCTATTAATTTGGCGGCCATCAGGAAAGTACAGAA
ACAAATTCACGGACGCAATCGAGTTCACAGTCCGCACCACTGCAAACACA
AACATTGTCTTCTTCAACGGCAAGCTCTTGGCCTGCAAGGAAGATGCTAT
GCCCTATGAAATGGACCCAGTTACCCTTGAGACTATTGGCCTCTATGATT
TCAACGGCCAGTTGCCCAGTCTAACATTTACTGCCCATCCAAAGCTGGAT
CCTGTCACCAAAGAATTTATTGGCTTTGGCTATGAGGCCAAGGGTGACGG
AACGCCAGATATCTGCTATTTCTCTGTTGGCCCCTCGGGGAAATTTACTG
ACCTTGTCTGGCTTGTTAGCCCGGTAGTGGCTATGATTCATGACTTCGCA
GTGACAGAGAATTATGCAAGTCTTCACCATAAAAGATCAAAGCTCTGACT
GCTAATATGATACTGTATAGGTCTTGTTTCCTCTTATACCCCAAACATGT
GATCTCGAGCGTATGAAGGCTGGCGGCGAGCACTGGCAGTGGACACCAGA
CATTCCTCTCTATATCGGTGTCTTGCCTCGACGGGGAGCACAGAGCTCTG
ACATTAAAGTAGGGTTTCCACACGGAGAAAGCTATGAAGACAAATTTCTG
ACTATTTGAAGTGGTTCCGTGCTCCCAATGCGTTCCCCGGCCACACCAGC
AATGCGTTTGAGAAAAATGGGAAGATCTTCTTCGACCTTCCGGTGGGCAA
GAAAAACGTCTTCTTCTGGTGGCCAGATTCGCAGGGCAATGCTCCAAGTC
CCCAGGAGGTGGCTTGCCACCTTTCCCGCTTCATAATCGACCCCAGCTCC
GATAATCTGGAGCTACAGCCCGCTCAAATTCTATCATCTGAAGATGTAGA
GTTTCCGAGAATTGACGAGCGTTTCCTTTCTCGTGAACATAATCATGCCT
TTTTCTGCCTCAACGACGATACTGCACCAACCATTTGGCCAACAGTGGTG
GCGAAAATGGGCGGCGGCCACCCGGTTTATAACTCGATCGGAAGATTGAA
TTTGAGGACGAGACAATTTGATAAATATTTCCCCGGCAATAAACACTTGG
TACAAGAGACCGTGTTCATCCCAAGGTCAAGTGGTGCCGCAGAGGGTGAA
GGATACCTGCTATTTTTGGTAAATAACTACGAGACCATGTTATCAGAATT
GCACCTGGTCGATACAGATGATTTTACCAGGCCGCTAGCCGTTATTTTAC
TCCCGCTGCGTTTACGACAAGGCCTTCATGGAAATTGGGTAGATGATAAA
GATTTGAAACAAGCTCGATACTGA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:294535..296258- >CAN33_16630-T1 ID=CAN33_16630-T1|Name=CAN33_16630-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7395bp|location=Sequence derived from alignment at NKJJ01000011.1:294535..296258- (Aspergillus niger FDAARGOS_311)
TGGTTCCGTGCTCCCAATGCGTTCCCCGGCCACACCAGCAATGCGTTTGA
GAAAAATGGGAAGATCTTCTTCGACCTTCCGGTGGGCAAGAAAAACGTCT
TCTTCTGGTGGCCAGATTCGCAGGGCAATGCTCCAAGTCCCCAGGAGGTG
GCTTGCCACCTTTCCCGCTTCATAATCGACCCCAGCTCCGATAATCTGGA
GCTACAGCCCGCTCAAATTCTATCATCTGAAGATGTAGAGTTTCCGAGAA
TTGACGAGCGTTTCCTTTCTCGTGAACATAATCATGCCTTTTTCTGCCTC
AACGACGATACTGCACCAACCATTTGGCCAACAGTGGTGGCGAAAATGGG
CGGCGGCCACCCGGTTTATAACTCGATCGGAAGATTGAATTTGAGGACGA
GACAATTTGATAAATATTTCCCCGGCAATAAACACTTGGTACAAGAGACC
GTGTTCATCCCAAGGTCAAGTGGTGCCGCAGAGGGTGAAGGATACCTGCT
ATTTTTGGTAAATAACTACGAGACCATGTTATCAGAATTGCACCTGGTCG
ATACAGATGATTTTACCAGGCCGCTAGCCGTTATTTTACTCCCGCTGCGT
TTACGACAAGGCCTTCATGGAAATTGGGTAGATGATAAAGATTTGAAACA
AGCTCGATACTGAGTCTTGTTTCCTCTTATACCCCAAACATGTGATCTCG
AGCGTATGAAGGCTGGCGGCGAGCACTGGCAGTGGACACCAGACATTCCT
CTCTATATCGGTGTCTTGCCTCGACGGGGAGCACAGAGCTCTGACATTAA
AGAAAGTACAGAAACAAATTCACGGACGCAATCGAGTTCACAGTCCGCAC
CACTGCAAACACAAACATTGTCTTCTTCAACGGCAAGCTCTTGGCCTGCA
AGGAAGATGCTATGCCCTATGAAATGGACCCAGTTACCCTTGAGACTATT
GGCCTCTATGATTTCAACGGCCAGTTGCCCAGTCTAACATTTACTGCCCA
TCCAAAGCTGGATCCTGTCACCAAAGAATTTATTGGCTTTGGCTATGAGG
CCAAGGGTGACGGAACGCCAGATATCTGCTATTTCTCTGTTGGCCCCTCG
GGGAAATTTACTGACCTTGTCTGGCTTGTTAGCCCGGTAGTGGCTATGAT
TCATGACTTCGCATGGTTCAATGGCGATGGCAACGTCAGTGCATTTCGTA
TTGAGTCTGGCAAAGTACATTTCAAGCAGCGCTATGTACGCACCGAAAAG
TCCATCAAAGAATGCGAGGCAGGGAGAGCACTGCTAGATGGCGCCGTCAC
AGATGATCCCAGAACACTTCCCTTCGCTTCCCCAGTTTTCACACTTCATG
AAACCATCCCGTTTCGAGGGTGAGACAAACTACCTTGAAGTGATAGGCAT
AATCCCACCAGAAGTGCGTGGCACATTCTACCGGGTTATGCCGGACCCGC
ATCTTCCTTCGCGAGTCGAAGATGACCCATGGTTCCGTGCTCCCAATGCG
TTCCCCGGCCACACCAGCAATGCGTTTGAGAAAAATGGGAAGATCTTCTT
CGACCTTCCGGTGGGCAAGAAAAACGTCTTCTTCTGGTGGCCAGATTCGC
AGGGCAATGCTCCAAGTCCCCAGGAGGTGGCTTGCCACCTTTCCCGCTTC
ATAATCGACCCCAGCTCCGATAATCTGGAGCTACAGCCCGCTCAAATTCT
ATCATCTGAAGATGTAGAGTTTCCGAGAATTGACGAGCGTTTCCTTTCTC
GTGAACATAATCATGCCTTTTTCTGCCTCAACGACGATACTGCACCAACC
ATTTGGCCAACAGTGGTGGCGAAAATGGGCGGCGGCCACCCGGTTTATAA
CTCGATCGGAAGATTGAATTTGAGGACGAGACAATTTGATAAATATTTCC
CCGGCAATAAACACTTGGTACAAGAGACCGTGTTCATCCCAAGGTCAAGT
GGTGCCGCAGAGGGTGAAGGATACCTGCTATTTTTGGTAAATAACTACGA
GACCATGTTATCAGAATTGCACCTGGTCGATACAGATGATTTTACCAGGC
CGCTAGCCGTTATTTTACTCCCGCTGCGTTTACGACAAGGCCTTCATGGA
AATTGGGTAGATGATAAAGATTTGAAACAAGCTCGATACTGAGTCTTGTT
TCCTCTTATACCCCAAACATGTGATCTCGAGCGTATGAAGGCTGGCGGCG
AGCACTGGCAGTGGACACCAGACATTCCTCTCTATATCGGTGTCTTGCCT
CGACGGGGAGCACAGAGCTCTGACATTAAAGAAAGTACAGAAACAAATTC
ACGGACGCAATCGAGTTCACAGTCCGCACCACTGCAAACACAAACATTGT
CTTCTTCAACGGCAAGCTCTTGGCCTGCAAGGAAGATGCTATGCCCTATG
AAATGGACCCAGTTACCCTTGAGACTATTGGCCTCTATGATTTCAACGGC
CAGTTGCCCAGTCTAACATTTACTGCCCATCCAAAGCTGGATCCTGTCAC
CAAAGAATTTATTGGCTTTGGCTATGAGGCCAAGGGTGACGGAACGCCAG
ATATCTGCTATTTCTCTGTTGGCCCCTCGGGGAAATTTACTGACCTTGTC
TGGCTTGTTAGCCCGGTAGTGGCTATGATTCATGACTTCGCATGGTTCAA
TGGCGATGGCAACGTCAGTGCATTTCGTATTGAGTCTGGCAAAGTACATT
TCAAGCAGCGCTATGTACGCACCGAAAAGTCCATCAAAGAATGCGAGGCA
GGGAGAGCACTGCTAGATGGCGCCGTCACAGATGATCCCAGAACACTTCC
CTTCGCTTCCCCAGTTTTCACACTTCATGAAACCATCCCGTTTCGAGGGT
GAGACAAACTACCTTGAAGTGATAGGCATAATCCCACCAGAAGTGCGTGG
CACATTCTACCGGGTTATGCCGGACCCGCATCTTCCTTCGCGAGTCGAAG
ATGACCCATGGTTCCGTGCTCCCAATGCGTTCCCCGGCCACACCAGCAAT
GCGTTTGAGAAAAATGGGAAGATCTTCTTCGACCTTCCGGTGGGCAAGAA
AAACGTCTTCTTCTGGTGGCCAGATTCGCAGGGCAATGCTCCAAGTCCCC
AGGAGGTGGCTTGCCACCTTTCCCGCTTCATAATCGACCCCAGCTCCGAT
AATCTGGAGCTACAGCCCGCTCAAATTCTATCATCTGAAGATGTAGAGTT
TCCGAGAATTGACGAGCGTTTCCTTTCTCGTGAACATAATCATGCCTTTT
TCTGCCTCAACGACGATACTGCACCAACCATTTGGCCAACAGTGGTGGCG
AAAATGGGCGGCGGCCACCCGGTTTATAACTCGATCGGAAGATTGAATTT
GAGGACGAGACAATTTGATAAATATTTCCCCGGCAATAAACACTTGGTAC
AAGAGACCGTGTTCATCCCAAGGTCAAGTGGTGCCGCAGAGGGTGAAGGA
TACCTGCTATTTTTGGTAAATAACTACGAGACCATGTTATCAGAATTGCA
CCTGGTCGATACAGATGATTTTACCAGGCCGCTAGCCGTTATTTTACTCC
CGCTGCGTTTACGACAAGGCCTTCATGGAAATTGGGTAGATGATAAAGAT
TTGAAACAAGCTCGATACTGAGTCTTGTTTCCTCTTATACCCCAAACATG
TGATCTCGAGCGTATGAAGGCTGGCGGCGAGCACTGGCAGTGGACACCAG
ACATTCCTCTCTATATCGGTGTCTTGCCTCGACGGGGAGCACAGAGCTCT
GACATTAAAGAAAGTACAGAAACAAATTCACGGACGCAATCGAGTTCACA
GTCCGCACCACTGCAAACACAAACATTGTCTTCTTCAACGGCAAGCTCTT
GGCCTGCAAGGAAGATGCTATGCCCTATGAAATGGACCCAGTTACCCTTG
AGACTATTGGCCTCTATGATTTCAACGGCCAGTTGCCCAGTCTAACATTT
ACTGCCCATCCAAAGCTGGATCCTGTCACCAAAGAATTTATTGGCTTTGG
CTATGAGGCCAAGGGTGACGGAACGCCAGATATCTGCTATTTCTCTGTTG
GCCCCTCGGGGAAATTTACTGACCTTGTCTGGCTTGTTAGCCCGGTAGTG
GCTATGATTCATGACTTCGCATGGTTCAATGGCGATGGCAACGTCAGTGC
ATTTCGTATTGAGTCTGGCAAAGTACATTTCAAGCAGCGCTATGTACGCA
CCGAAAAGTCCATCAAAGAATGCGAGGCAGGGAGAGCACTGCTAGATGGC
GCCGTCACAGATGATCCCAGAACACTTCCCTTCGCTTCCCCAGTTTTCAC
ACTTCATGAAACCATCCCGTTTCGAGGGTGAGACAAACTACCTTGAAGTG
ATAGGCATAATCCCACCAGAAGTGCGTGGCACATTCTACCGGGTTATGCC
GGACCCGCATCTTCCTTCGCGAGTCGAAGATGACCCATGGTTCCGTGCTC
CCAATGCGTTCCCCGGCCACACCAGCAATGCGTTTGAGAAAAATGGGAAG
ATCTTCTTCGACCTTCCGGTGGGCAAGAAAAACGTCTTCTTCTGGTGGCC
AGATTCGCAGGGCAATGCTCCAAGTCCCCAGGAGGTGGCTTGCCACCTTT
CCCGCTTCATAATCGACCCCAGCTCCGATAATCTGGAGCTACAGCCCGCT
CAAATTCTATCATCTGAAGATGTAGAGTTTCCGAGAATTGACGAGCGTTT
CCTTTCTCGTGAACATAATCATGCCTTTTTCTGCCTCAACGACGATACTG
CACCAACCATTTGGCCAACAGTGGTGGCGAAAATGGGCGGCGGCCACCCG
GTTTATAACTCGATCGGAAGATTGAATTTGAGGACGAGACAATTTGATAA
ATATTTCCCCGGCAATAAACACTTGGTACAAGAGACCGTGTTCATCCCAA
GGTCAAGTGGTGCCGCAGAGGGTGAAGGATACCTGCTATTTTTGGTAAAT
AACTACGAGACCATGTTATCAGAATTGCACCTGGTCGATACAGATGATTT
TACCAGGCCGCTAGCCGTTATTTTACTCCCGCTGCGTTTACGACAAGGCC
TTCATGGAAATTGGGTAGATGATAAAGATTTGAAACAAGCTCGATACTGA
GTCTTGTTTCCTCTTATACCCCAAACATGTGATCTCGAGCGTATGAAGGC
TGGCGGCGAGCACTGGCAGTGGACACCAGACATTCCTCTCTATATCGGTG
TCTTGCCTCGACGGGGAGCACAGAGCTCTGACATTAAAGAAAGTACAGAA
ACAAATTCACGGACGCAATCGAGTTCACAGTCCGCACCACTGCAAACACA
AACATTGTCTTCTTCAACGGCAAGCTCTTGGCCTGCAAGGAAGATGCTAT
GCCCTATGAAATGGACCCAGTTACCCTTGAGACTATTGGCCTCTATGATT
TCAACGGCCAGTTGCCCAGTCTAACATTTACTGCCCATCCAAAGCTGGAT
CCTGTCACCAAAGAATTTATTGGCTTTGGCTATGAGGCCAAGGGTGACGG
AACGCCAGATATCTGCTATTTCTCTGTTGGCCCCTCGGGGAAATTTACTG
ACCTTGTCTGGCTTGTTAGCCCGGTAGTGGCTATGATTCATGACTTCGCA
TGGTTCAATGGCGATGGCAACGTCAGTGCATTTCGTATTGAGTCTGGCAA
AGTACATTTCAAGCAGCGCTATGTACGCACCGAAAAGTCCATCAAAGAAT
GCGAGGCAGGGAGAGCACTGCTAGATGGCGCCGTCACAGATGATCCCAGA
ACACTTCCCTTCGCTTCCCCAGTTTTCACACTTCATGAAACCATCCCGTT
TCGAGGGTGAGACAAACTACCTTGAAGTGATAGGCATAATCCCACCAGAA
GTGCGTGGCACATTCTACCGGGTTATGCCGGACCCGCATCTTCCTTCGCG
AGTCGAAGATGACCCATGGTTCCGTGCTCCCAATGCGTTCCCCGGCCACA
CCAGCAATGCGTTTGAGAAAAATGGGAAGATCTTCTTCGACCTTCCGGTG
GGCAAGAAAAACGTCTTCTTCTGGTGGCCAGATTCGCAGGGCAATGCTCC
AAGTCCCCAGGAGGTGGCTTGCCACCTTTCCCGCTTCATAATCGACCCCA
GCTCCGATAATCTGGAGCTACAGCCCGCTCAAATTCTATCATCTGAAGAT
GTAGAGTTTCCGAGAATTGACGAGCGTTTCCTTTCTCGTGAACATAATCA
TGCCTTTTTCTGCCTCAACGACGATACTGCACCAACCATTTGGCCAACAG
TGGTGGCGAAAATGGGCGGCGGCCACCCGGTTTATAACTCGATCGGAAGA
TTGAATTTGAGGACGAGACAATTTGATAAATATTTCCCCGGCAATAAACA
CTTGGTACAAGAGACCGTGTTCATCCCAAGGTCAAGTGGTGCCGCAGAGG
GTGAAGGATACCTGCTATTTTTGGTAAATAACTACGAGACCATGTTATCA
GAATTGCACCTGGTCGATACAGATGATTTTACCAGGCCGCTAGCCGTTAT
TTTACTCCCGCTGCGTTTACGACAAGGCCTTCATGGAAATTGGGTAGATG
ATAAAGATTTGAAACAAGCTCGATACTGAGTCTTGTTTCCTCTTATACCC
CAAACATGTGATCTCGAGCGTATGAAGGCTGGCGGCGAGCACTGGCAGTG
GACACCAGACATTCCTCTCTATATCGGTGTCTTGCCTCGACGGGGAGCAC
AGAGCTCTGACATTAAAGAAAGTACAGAAACAAATTCACGGACGCAATCG
AGTTCACAGTCCGCACCACTGCAAACACAAACATTGTCTTCTTCAACGGC
AAGCTCTTGGCCTGCAAGGAAGATGCTATGCCCTATGAAATGGACCCAGT
TACCCTTGAGACTATTGGCCTCTATGATTTCAACGGCCAGTTGCCCAGTC
TAACATTTACTGCCCATCCAAAGCTGGATCCTGTCACCAAAGAATTTATT
GGCTTTGGCTATGAGGCCAAGGGTGACGGAACGCCAGATATCTGCTATTT
CTCTGTTGGCCCCTCGGGGAAATTTACTGACCTTGTCTGGCTTGTTAGCC
CGGTAGTGGCTATGATTCATGACTTCGCATGGTTCAATGGCGATGGCAAC
GTCAGTGCATTTCGTATTGAGTCTGGCAAAGTACATTTCAAGCAGCGCTA
TGTACGCACCGAAAAGTCCATCAAAGAATGCGAGGCAGGGAGAGCACTGC
TAGATGGCGCCGTCACAGATGATCCCAGAACACTTCCCTTCGCTTCCCCA
GTTTTCACACTTCATGAAACCATCCCGTTTCGAGGGTGAGACAAACTACC
TTGAAGTGATAGGCATAATCCCACCAGAAGTGCGTGGCACATTCTACCGG
GTTATGCCGGACCCGCATCTTCCTTCGCGAGTCGAAGATGACCCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000111.2 |
| DBxref | InterPro:IPR004294 |
| DBxref | PFAM:PF03055 |
| Product | Retinal pigment epithelial membrane protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:294535..296258 - |
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