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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:333476..335446- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_16705-T1 ID=CAN33_16705-T1|Name=CAN33_16705-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1971bp|location=Sequence derived from alignment at NKJJ01000011.1:333476..335446- (Aspergillus niger FDAARGOS_311)
ATGGACAGCGATCCAGCTAAGCGAGGCAGCAACACTCCGGAACCGCCTCG
GAGCAAAAAGCGCGCCAAATATACTCAGGTCGCTTGGTGCGCTAATCCTC
CACACATGGCTTCTTGGCTTGACTGACCACCCTACTAGCAATGAGTGTAA
GCGACGAAAGCTGAAATGTAGTGGCGAGCCTGTGTGCTCCCGCTGTGCTA
GAGACAACGTCCGCTGCGTCTACACCGCGAATGCTCACGCTGTCGCCAAC
ACGGCTTCTCCTTCGGTCGAGGACCCTGTCAAAGATGAAAGGTAAAACGT
ATCCCGGCCATCTCGGAACTATGTCACTTACGCAGGTATGGCAGATTATC
AAGTCGATTACAGACCGTCGACCAGCAAATCGCATCCCTTCAGCGAGAAA
TGCGAGCCATGGCCGCTCGTCTTCGCCATCTGGAGTCAACATCCGTGACC
ACTCCGGCAAACAACACTAGCATTCCCACCTCCTTGTCGACTGTTTCTTC
TACCTCGGTCAACACGGGACTACAGCGGATCCTGAATCGTCCCAAGTCCC
CCAGCTACGTCGGTCCGACCAGTGCAGAGTTTGGCCTCACAGCGCGACAA
AAGCCGTCTGAGGACAGCGATGGCGATGCGGACGAAACAGATTCGGCAGC
AGCGCAAAGCCCAGCGCCTGTTCAAGACTCAGAAGCCTTGTCAGGCGACC
CTCTTCGCTGTATGGGTTTGACAGAGACCCTGCGACTGGTCACAGTATAC
GAACATACCGTTGGCCTGATCTATCCGTGCGTGGACCTCGACAGCGTTCG
CGCGTACGTGGTCGAGTTCTTCCGAGATGAGGGGAACGGTCTCAATGAGG
CACGCTCGCCGGAAACTGAAGACCAGGATTGGTTCTTTGCTCGAGATGTG
GAAGTGCTGAAGATCATTGTAGCAACAGCCCTGCTAGCGGAATCGCACGG
TCGGAGCGAAAGAGCGGCCTGGTTGGCAGATAGCGTCGAGGATCAGTTCG
CTTCACGGTACAAGATCCCTGAGGTGGACATGAAGGAATTGCTTATTCTG
ACTTTAGTGGTGCGTTTGACTCCCTTGAGCTGCCGCTCTCCCTAGCTAAC
CAGTCAGTCCATTTTCCATTCCTACCGCGACGACGAAGTGCTTGCATGGC
GGACAATCGGGTCTGCCGTCCGGGGTGCCGTCCAACTCGGCCTACACTGC
CAGGAGACATGGCTCAAAACGGGAGGAGTATTTCCAGGGGAGCTACACAG
GACATGGGCCAGCCGGCTGTTCTGGTGCATCTACGTACTCGATCGGAAAT
GGTCGTTCGGGACGGGCTTGCCATTTGCCATTCAAGATTCCGACATGGAT
ACGAACCTACCGGAGCCGGGCACCTCAACGCCCTACCTGACCTGCATGAT
CTCGTATGCACGACTCAGTTCTAAGATCTGGGGCCTCGTGGTCGGCTGGC
GCACGCGGCCTCGAGCCGCGACGGCAGACTACTGCTCATACCTGGACTTC
CAAGTGCAGCAATGGATCCAATCCATCCCTCCAGAGCTACGCTTCGACCC
GTCGCAGCGATCATCATCCACCGGTCCCAATGCGCAGGCAGACAGCATGA
TGATGCTTCAAGTGCTATTAGCACTGCAAGCGAATCAGCTCCGCATTCTC
GTCTACAGACAATACCTGCTCAGCACAGAGAGCATTGAAGAAAGCGTGCC
GAGTGCATCCATCGCTGTCGAAACCGCCAAAAGCACCGTCCATATGCTCG
ACTTCTTCAGCCGTGTCTCAGACATCTACTTTCAACGTCCCGAACCGTTC
AACTACTTTCTCATTTCTGCCCTCGCAGCGCTTTTCTTGGCTGTGCTCCA
CGCCCCTCCCGATTCAGCCAGGTCTGCCGTCCAGAGTTCTACAAAGCCGT
CGACATGGTTCGCCGATCATCCACTCGAGCGCGCACATCCCGTCGTCTGC
AAAAGATCATCCGGAACTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:333476..335446- >CAN33_16705-T1 ID=CAN33_16705-T1|Name=CAN33_16705-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7272bp|location=Sequence derived from alignment at NKJJ01000011.1:333476..335446- (Aspergillus niger FDAARGOS_311)
TCCATTTTCCATTCCTACCGCGACGACGAAGTGCTTGCATGGCGGACAAT
CGGGTCTGCCGTCCGGGGTGCCGTCCAACTCGGCCTACACTGCCAGGAGA
CATGGCTCAAAACGGGAGGAGTATTTCCAGGGGAGCTACACAGGACATGG
GCCAGCCGGCTGTTCTGGTGCATCTACGTACTCGATCGGAAATGGTCGTT
CGGGACGGGCTTGCCATTTGCCATTCAAGATTCCGACATGGATACGAACC
TACCGGAGCCGGGCACCTCAACGCCCTACCTGACCTGCATGATCTCGTAT
GCACGACTCAGTTCTAAGATCTGGGGCCTCGTGGTCGGCTGGCGCACGCG
GCCTCGAGCCGCGACGGCAGACTACTGCTCATACCTGGACTTCCAAGTGC
AGCAATGGATCCAATCCATCCCTCCAGAGCTACGCTTCGACCCGTCGCAG
CGATCATCATCCACCGGTCCCAATGCGCAGGCAGACAGCATGATGATGCT
TCAAGTGCTATTAGCACTGCAAGCGAATCAGCTCCGCATTCTCGTCTACA
GACAATACCTGCTCAGCACAGAGAGCATTGAAGAAAGCGTGCCGAGTGCA
TCCATCGCTGTCGAAACCGCCAAAAGCACCGTCCATATGCTCGACTTCTT
CAGCCGTGTCTCAGACATCTACTTTCAACGTCCCGAACCGTTCAACTACT
TTCTCATTTCTGCCCTCGCAGCGCTTTTCTTGGCTGTGCTCCACGCCCCT
CCCGATTCAGCCAGGTCTGCCGTCCAGAGTTCTACAAAGCCGTCGACATG
GTTCGCCGATCATCCACTCGAGCGCGCACATCCCGTCGTCTGCAAAAGAT
CATCCGGAACTTGAATTATCAAGTCGATTACAGACCGTCGACCAGCAAAT
CGCATCCCTTCAGCGAGAAATGCGAGCCATGGCCGCTCGTCTTCGCCATC
TGGAGTCAACATCCGTGACCACTCCGGCAAACAACACTAGCATTCCCACC
TCCTTGTCGACTGTTTCTTCTACCTCGGTCAACACGGGACTACAGCGGAT
CCTGAATCGTCCCAAGTCCCCCAGCTACGTCGGTCCGACCAGTGCAGAGT
TTGGCCTCACAGCGCGACAAAAGCCGTCTGAGGACAGCGATGGCGATGCG
GACGAAACAGATTCGGCAGCAGCGCAAAGCCCAGCGCCTGTTCAAGACTC
AGAAGCCTTGTCAGGCGACCCTCTTCGCTGTATGGGTTTGACAGAGACCC
TGCGACTGGTCACAGTATACGAACATACCGTTGGCCTGATCTATCCGTGC
GTGGACCTCGACAGCGTTCGCGCGTACGTGGTCGAGTTCTTCCGAGATGA
GGGGAACGGTCTCAATGAGGCACGCTCGCCGGAAACTGAAGACCAGGATT
GGTTCTTTGCTCGAGATGTGGAAGTGCTGAAGATCATTGTAGCAACAGCC
CTGCTAGCGGAATCGCACGGTCGGAGCGAAAGAGCGGCCTGGTTGGCAGA
TAGCGTCGAGGATCAGTTCGCTTCACGGTACAAGATCCCTGAGGTGGACA
TGAAGGAATTGCTTATTCTGACTTTAGTGCAATGAGTGTAAGCGACGAAA
GCTGAAATGTAGTGGCGAGCCTGTGTGCTCCCGCTGTGCTAGAGACAACG
TCCGCTGCGTCTACACCGCGAATGCTCACGCTGTCGCCAACACGGCTTCT
CCTTCGGTCGAGGACCCTGTCAAAGATGAAAGATGGACAGCGATCCAGCT
AAGCGAGGCAGCAACACTCCGGAACCGCCTCGGAGCAAAAAGCGCGCCAA
ATATACTCAGGTCGCTTGTCCATTTTCCATTCCTACCGCGACGACGAAGT
GCTTGCATGGCGGACAATCGGGTCTGCCGTCCGGGGTGCCGTCCAACTCG
GCCTACACTGCCAGGAGACATGGCTCAAAACGGGAGGAGTATTTCCAGGG
GAGCTACACAGGACATGGGCCAGCCGGCTGTTCTGGTGCATCTACGTACT
CGATCGGAAATGGTCGTTCGGGACGGGCTTGCCATTTGCCATTCAAGATT
CCGACATGGATACGAACCTACCGGAGCCGGGCACCTCAACGCCCTACCTG
ACCTGCATGATCTCGTATGCACGACTCAGTTCTAAGATCTGGGGCCTCGT
GGTCGGCTGGCGCACGCGGCCTCGAGCCGCGACGGCAGACTACTGCTCAT
ACCTGGACTTCCAAGTGCAGCAATGGATCCAATCCATCCCTCCAGAGCTA
CGCTTCGACCCGTCGCAGCGATCATCATCCACCGGTCCCAATGCGCAGGC
AGACAGCATGATGATGCTTCAAGTGCTATTAGCACTGCAAGCGAATCAGC
TCCGCATTCTCGTCTACAGACAATACCTGCTCAGCACAGAGAGCATTGAA
GAAAGCGTGCCGAGTGCATCCATCGCTGTCGAAACCGCCAAAAGCACCGT
CCATATGCTCGACTTCTTCAGCCGTGTCTCAGACATCTACTTTCAACGTC
CCGAACCGTTCAACTACTTTCTCATTTCTGCCCTCGCAGCGCTTTTCTTG
GCTGTGCTCCACGCCCCTCCCGATTCAGCCAGGTCTGCCGTCCAGAGTTC
TACAAAGCCGTCGACATGGTTCGCCGATCATCCACTCGAGCGCGCACATC
CCGTCGTCTGCAAAAGATCATCCGGAACTTGAATTATCAAGTCGATTACA
GACCGTCGACCAGCAAATCGCATCCCTTCAGCGAGAAATGCGAGCCATGG
CCGCTCGTCTTCGCCATCTGGAGTCAACATCCGTGACCACTCCGGCAAAC
AACACTAGCATTCCCACCTCCTTGTCGACTGTTTCTTCTACCTCGGTCAA
CACGGGACTACAGCGGATCCTGAATCGTCCCAAGTCCCCCAGCTACGTCG
GTCCGACCAGTGCAGAGTTTGGCCTCACAGCGCGACAAAAGCCGTCTGAG
GACAGCGATGGCGATGCGGACGAAACAGATTCGGCAGCAGCGCAAAGCCC
AGCGCCTGTTCAAGACTCAGAAGCCTTGTCAGGCGACCCTCTTCGCTGTA
TGGGTTTGACAGAGACCCTGCGACTGGTCACAGTATACGAACATACCGTT
GGCCTGATCTATCCGTGCGTGGACCTCGACAGCGTTCGCGCGTACGTGGT
CGAGTTCTTCCGAGATGAGGGGAACGGTCTCAATGAGGCACGCTCGCCGG
AAACTGAAGACCAGGATTGGTTCTTTGCTCGAGATGTGGAAGTGCTGAAG
ATCATTGTAGCAACAGCCCTGCTAGCGGAATCGCACGGTCGGAGCGAAAG
AGCGGCCTGGTTGGCAGATAGCGTCGAGGATCAGTTCGCTTCACGGTACA
AGATCCCTGAGGTGGACATGAAGGAATTGCTTATTCTGACTTTAGTGCAA
TGAGTGTAAGCGACGAAAGCTGAAATGTAGTGGCGAGCCTGTGTGCTCCC
GCTGTGCTAGAGACAACGTCCGCTGCGTCTACACCGCGAATGCTCACGCT
GTCGCCAACACGGCTTCTCCTTCGGTCGAGGACCCTGTCAAAGATGAAAG
ATGGACAGCGATCCAGCTAAGCGAGGCAGCAACACTCCGGAACCGCCTCG
GAGCAAAAAGCGCGCCAAATATACTCAGGTCGCTTGTCCATTTTCCATTC
CTACCGCGACGACGAAGTGCTTGCATGGCGGACAATCGGGTCTGCCGTCC
GGGGTGCCGTCCAACTCGGCCTACACTGCCAGGAGACATGGCTCAAAACG
GGAGGAGTATTTCCAGGGGAGCTACACAGGACATGGGCCAGCCGGCTGTT
CTGGTGCATCTACGTACTCGATCGGAAATGGTCGTTCGGGACGGGCTTGC
CATTTGCCATTCAAGATTCCGACATGGATACGAACCTACCGGAGCCGGGC
ACCTCAACGCCCTACCTGACCTGCATGATCTCGTATGCACGACTCAGTTC
TAAGATCTGGGGCCTCGTGGTCGGCTGGCGCACGCGGCCTCGAGCCGCGA
CGGCAGACTACTGCTCATACCTGGACTTCCAAGTGCAGCAATGGATCCAA
TCCATCCCTCCAGAGCTACGCTTCGACCCGTCGCAGCGATCATCATCCAC
CGGTCCCAATGCGCAGGCAGACAGCATGATGATGCTTCAAGTGCTATTAG
CACTGCAAGCGAATCAGCTCCGCATTCTCGTCTACAGACAATACCTGCTC
AGCACAGAGAGCATTGAAGAAAGCGTGCCGAGTGCATCCATCGCTGTCGA
AACCGCCAAAAGCACCGTCCATATGCTCGACTTCTTCAGCCGTGTCTCAG
ACATCTACTTTCAACGTCCCGAACCGTTCAACTACTTTCTCATTTCTGCC
CTCGCAGCGCTTTTCTTGGCTGTGCTCCACGCCCCTCCCGATTCAGCCAG
GTCTGCCGTCCAGAGTTCTACAAAGCCGTCGACATGGTTCGCCGATCATC
CACTCGAGCGCGCACATCCCGTCGTCTGCAAAAGATCATCCGGAACTTGA
ATTATCAAGTCGATTACAGACCGTCGACCAGCAAATCGCATCCCTTCAGC
GAGAAATGCGAGCCATGGCCGCTCGTCTTCGCCATCTGGAGTCAACATCC
GTGACCACTCCGGCAAACAACACTAGCATTCCCACCTCCTTGTCGACTGT
TTCTTCTACCTCGGTCAACACGGGACTACAGCGGATCCTGAATCGTCCCA
AGTCCCCCAGCTACGTCGGTCCGACCAGTGCAGAGTTTGGCCTCACAGCG
CGACAAAAGCCGTCTGAGGACAGCGATGGCGATGCGGACGAAACAGATTC
GGCAGCAGCGCAAAGCCCAGCGCCTGTTCAAGACTCAGAAGCCTTGTCAG
GCGACCCTCTTCGCTGTATGGGTTTGACAGAGACCCTGCGACTGGTCACA
GTATACGAACATACCGTTGGCCTGATCTATCCGTGCGTGGACCTCGACAG
CGTTCGCGCGTACGTGGTCGAGTTCTTCCGAGATGAGGGGAACGGTCTCA
ATGAGGCACGCTCGCCGGAAACTGAAGACCAGGATTGGTTCTTTGCTCGA
GATGTGGAAGTGCTGAAGATCATTGTAGCAACAGCCCTGCTAGCGGAATC
GCACGGTCGGAGCGAAAGAGCGGCCTGGTTGGCAGATAGCGTCGAGGATC
AGTTCGCTTCACGGTACAAGATCCCTGAGGTGGACATGAAGGAATTGCTT
ATTCTGACTTTAGTGCAATGAGTGTAAGCGACGAAAGCTGAAATGTAGTG
GCGAGCCTGTGTGCTCCCGCTGTGCTAGAGACAACGTCCGCTGCGTCTAC
ACCGCGAATGCTCACGCTGTCGCCAACACGGCTTCTCCTTCGGTCGAGGA
CCCTGTCAAAGATGAAAGATGGACAGCGATCCAGCTAAGCGAGGCAGCAA
CACTCCGGAACCGCCTCGGAGCAAAAAGCGCGCCAAATATACTCAGGTCG
CTTGTCCATTTTCCATTCCTACCGCGACGACGAAGTGCTTGCATGGCGGA
CAATCGGGTCTGCCGTCCGGGGTGCCGTCCAACTCGGCCTACACTGCCAG
GAGACATGGCTCAAAACGGGAGGAGTATTTCCAGGGGAGCTACACAGGAC
ATGGGCCAGCCGGCTGTTCTGGTGCATCTACGTACTCGATCGGAAATGGT
CGTTCGGGACGGGCTTGCCATTTGCCATTCAAGATTCCGACATGGATACG
AACCTACCGGAGCCGGGCACCTCAACGCCCTACCTGACCTGCATGATCTC
GTATGCACGACTCAGTTCTAAGATCTGGGGCCTCGTGGTCGGCTGGCGCA
CGCGGCCTCGAGCCGCGACGGCAGACTACTGCTCATACCTGGACTTCCAA
GTGCAGCAATGGATCCAATCCATCCCTCCAGAGCTACGCTTCGACCCGTC
GCAGCGATCATCATCCACCGGTCCCAATGCGCAGGCAGACAGCATGATGA
TGCTTCAAGTGCTATTAGCACTGCAAGCGAATCAGCTCCGCATTCTCGTC
TACAGACAATACCTGCTCAGCACAGAGAGCATTGAAGAAAGCGTGCCGAG
TGCATCCATCGCTGTCGAAACCGCCAAAAGCACCGTCCATATGCTCGACT
TCTTCAGCCGTGTCTCAGACATCTACTTTCAACGTCCCGAACCGTTCAAC
TACTTTCTCATTTCTGCCCTCGCAGCGCTTTTCTTGGCTGTGCTCCACGC
CCCTCCCGATTCAGCCAGGTCTGCCGTCCAGAGTTCTACAAAGCCGTCGA
CATGGTTCGCCGATCATCCACTCGAGCGCGCACATCCCGTCGTCTGCAAA
AGATCATCCGGAACTTGAATTATCAAGTCGATTACAGACCGTCGACCAGC
AAATCGCATCCCTTCAGCGAGAAATGCGAGCCATGGCCGCTCGTCTTCGC
CATCTGGAGTCAACATCCGTGACCACTCCGGCAAACAACACTAGCATTCC
CACCTCCTTGTCGACTGTTTCTTCTACCTCGGTCAACACGGGACTACAGC
GGATCCTGAATCGTCCCAAGTCCCCCAGCTACGTCGGTCCGACCAGTGCA
GAGTTTGGCCTCACAGCGCGACAAAAGCCGTCTGAGGACAGCGATGGCGA
TGCGGACGAAACAGATTCGGCAGCAGCGCAAAGCCCAGCGCCTGTTCAAG
ACTCAGAAGCCTTGTCAGGCGACCCTCTTCGCTGTATGGGTTTGACAGAG
ACCCTGCGACTGGTCACAGTATACGAACATACCGTTGGCCTGATCTATCC
GTGCGTGGACCTCGACAGCGTTCGCGCGTACGTGGTCGAGTTCTTCCGAG
ATGAGGGGAACGGTCTCAATGAGGCACGCTCGCCGGAAACTGAAGACCAG
GATTGGTTCTTTGCTCGAGATGTGGAAGTGCTGAAGATCATTGTAGCAAC
AGCCCTGCTAGCGGAATCGCACGGTCGGAGCGAAAGAGCGGCCTGGTTGG
CAGATAGCGTCGAGGATCAGTTCGCTTCACGGTACAAGATCCCTGAGGTG
GACATGAAGGAATTGCTTATTCTGACTTTAGTGCAATGAGTGTAAGCGAC
GAAAGCTGAAATGTAGTGGCGAGCCTGTGTGCTCCCGCTGTGCTAGAGAC
AACGTCCGCTGCGTCTACACCGCGAATGCTCACGCTGTCGCCAACACGGC
TTCTCCTTCGGTCGAGGACCCTGTCAAAGATGAAAGATGGACAGCGATCC
AGCTAAGCGAGGCAGCAACACTCCGGAACCGCCTCGGAGCAAAAAGCGCG
CCAAATATACTCAGGTCGCTTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | Fungal specific transcription factor domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:333476..335446 - |
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