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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:357834..358905- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_16755-T1 ID=CAN33_16755-T1|Name=CAN33_16755-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1072bp|location=Sequence derived from alignment at NKJJ01000011.1:357834..358905- (Aspergillus niger FDAARGOS_311)
ATGACCACCGTCACGGCCCCCGCGCCCTGGATCACCAGCAGCCAACAATG
TACCCTAGAGACATGTCCGCTATCATATGCCCATATCACCTATCTCCCTA
ACCTAGGCGGCAATGCCTTCTACATCGCTCTATTCGCCCTCTTCATCCCC
GTCCAACTCTACCTCGGCATCCGACACCGTACCTGGGGGTACCTCTTCGG
CGCCATCTGCGGCCTTATCCTCGAAGTCCTGGGCTACATAGCACGCATTT
ACATGCGACACAACCCATTCATTGACCGGTGGTTCATCATGTATGTTCAT
CCCAACAACCCCTCATCTCCCCTCCACCACTAACCAAATTAAATACAGGT
ATCTCGTCTGCCTCACCATCGCCCCCGCCTTCCTCAGCGGCGCCATCTAC
GTTTCCCTAGCCCGGATTGTCGGCGCCTACTCGTCCCAATTATCCCGGAT
AAAACAGCGTAACTACTCCCTGATCTTCATCAGCTTCGACATCATCTCCC
TCCTGCTACAAGCCGCCGGAGGCGCCATCACTACCTCGAACTCCGCCTCC
GAAGTACAAGACGGGATCAACATCATGATAGCCGGTCTCAGCTCCCAAGT
CGCCTCTCTAACCCTCTACATCGTGATCTGTCTCGACTACGCCTTCCGAG
TCTACCGTCTCAGCGCACGGAATCCCTCCCCACCATCGAACATGTTCCGC
ATGGCAAACCACACGAAGCAGGAATCCGAAAGCCAGGATCTAGTCTCGGG
TTCCAGGGACTTGGTGACCCTGAACCCGGACTTCGCTAGTCTCCGGGCGA
GTAAACGCTGGAAAGCGTTTCTGTTTTGCCAGGGGTTGGCGGTCGTGTGT
ATTTACATTCGGAGTTGTTTCCGGGTTGCAGAGCTGTGTGGTGGGTTTAG
TAGCCATTTGGCGAATGATCAGACGACGTTCATGGTGTTGGAGGGGGCGA
TGATTAGTATTGCGGTTATTGCGATGAGTAGTTGGGGGCATCCGGGAGTT
GGGTTCCATGGGAGATGGGATGCGTTGAATTATCCGATGTTTCAAAGGAC
GAAGAAGGGGGTGGATGTTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:357834..358905- >CAN33_16755-T1 ID=CAN33_16755-T1|Name=CAN33_16755-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2028bp|location=Sequence derived from alignment at NKJJ01000011.1:357834..358905- (Aspergillus niger FDAARGOS_311)
GTATCTCGTCTGCCTCACCATCGCCCCCGCCTTCCTCAGCGGCGCCATCT
ACGTTTCCCTAGCCCGGATTGTCGGCGCCTACTCGTCCCAATTATCCCGG
ATAAAACAGCGTAACTACTCCCTGATCTTCATCAGCTTCGACATCATCTC
CCTCCTGCTACAAGCCGCCGGAGGCGCCATCACTACCTCGAACTCCGCCT
CCGAAGTACAAGACGGGATCAACATCATGATAGCCGGTCTCAGCTCCCAA
GTCGCCTCTCTAACCCTCTACATCGTGATCTGTCTCGACTACGCCTTCCG
AGTCTACCGTCTCAGCGCACGGAATCCCTCCCCACCATCGAACATGTTCC
GCATGGCAAACCACACGAAGCAGGAATCCGAAAGCCAGGATCTAGTCTCG
GGTTCCAGGGACTTGGTGACCCTGAACCCGGACTTCGCTAGTCTCCGGGC
GAGTAAACGCTGGAAAGCGTTTCTGTTTTGCCAGGGGTTGGCGGTCGTGT
GTATTTACATTCGGAGTTGTTTCCGGGTTGCAGAGCTGTGTGGTGGGTTT
AGTAGCCATTTGGCGAATGATCAGACGACGTTCATGGTGTTGGAGGGGGC
GATGATTAGTATTGCGGTTATTGCGATGAGTAGTTGGGGGCATCCGGGAG
TTGGGTTCCATGGGAGATGGGATGCGTTGAATTATCCGATGTTTCAAAGG
ACGAAGAAGGGGGTGGATGTTTAGATGACCACCGTCACGGCCCCCGCGCC
CTGGATCACCAGCAGCCAACAATGTACCCTAGAGACATGTCCGCTATCAT
ATGCCCATATCACCTATCTCCCTAACCTAGGCGGCAATGCCTTCTACATC
GCTCTATTCGCCCTCTTCATCCCCGTCCAACTCTACCTCGGCATCCGACA
CCGTACCTGGGGGTACCTCTTCGGCGCCATCTGCGGCCTTATCCTCGAAG
TCCTGGGCTACATAGCACGCATTTACATGCGACACAACCCATTCATTGAC
CGGTGGTTCATCATGTATCTCGTCTGCCTCACCATCGCCCCCGCCTTCCT
CAGCGGCGCCATCTACGTTTCCCTAGCCCGGATTGTCGGCGCCTACTCGT
CCCAATTATCCCGGATAAAACAGCGTAACTACTCCCTGATCTTCATCAGC
TTCGACATCATCTCCCTCCTGCTACAAGCCGCCGGAGGCGCCATCACTAC
CTCGAACTCCGCCTCCGAAGTACAAGACGGGATCAACATCATGATAGCCG
GTCTCAGCTCCCAAGTCGCCTCTCTAACCCTCTACATCGTGATCTGTCTC
GACTACGCCTTCCGAGTCTACCGTCTCAGCGCACGGAATCCCTCCCCACC
ATCGAACATGTTCCGCATGGCAAACCACACGAAGCAGGAATCCGAAAGCC
AGGATCTAGTCTCGGGTTCCAGGGACTTGGTGACCCTGAACCCGGACTTC
GCTAGTCTCCGGGCGAGTAAACGCTGGAAAGCGTTTCTGTTTTGCCAGGG
GTTGGCGGTCGTGTGTATTTACATTCGGAGTTGTTTCCGGGTTGCAGAGC
TGTGTGGTGGGTTTAGTAGCCATTTGGCGAATGATCAGACGACGTTCATG
GTGTTGGAGGGGGCGATGATTAGTATTGCGGTTATTGCGATGAGTAGTTG
GGGGCATCCGGGAGTTGGGTTCCATGGGAGATGGGATGCGTTGAATTATC
CGATGTTTCAAAGGACGAAGAAGGGGGTGGATGTTTAGATGACCACCGTC
ACGGCCCCCGCGCCCTGGATCACCAGCAGCCAACAATGTACCCTAGAGAC
ATGTCCGCTATCATATGCCCATATCACCTATCTCCCTAACCTAGGCGGCA
ATGCCTTCTACATCGCTCTATTCGCCCTCTTCATCCCCGTCCAACTCTAC
CTCGGCATCCGACACCGTACCTGGGGGTACCTCTTCGGCGCCATCTGCGG
CCTTATCCTCGAAGTCCTGGGCTACATAGCACGCATTTACATGCGACACA
ACCCATTCATTGACCGGTGGTTCATCAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000111.3 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | RTA1 like protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:357834..358905 - |
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