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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:428977..429863- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_16850-T1 ID=CAN33_16850-T1|Name=CAN33_16850-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=887bp|location=Sequence derived from alignment at NKJJ01000011.1:428977..429863- (Aspergillus niger FDAARGOS_311)
ATGGCTTCTACGCAGTGCGAGTTGTATATGTATACACCCAGCCTTGCATT
GGCGATTATCGGAGTCATTCTATTCTCTGCCTTGACCACGATCCACCTGT
ACCGTATGATTGAATCAAAAGCGTGGTATGGCATATTCTTCGTTCTTGGT
GGTCTGGGTAAGTTGTCCCTGTCATTGATGCCCTATCAATCTGTTAACAA
TATGTAGCAGAGTTAATCGGACATACGGCTCGATCCTTCTCGACCCAAGA
TGTCTGCGATAGAGGCGCGTACGGTGTGCAATCAGTCGCACTATTGATGG
GACCGACATTGATCATGTTTTCCGTCAACCTGACTCAGAGTGAGTTCGTC
AACGTGCTTGATGCCGAACAATTCTGTTTGCTCCCACTGGCGTGGCAGCG
GGGCGTTTATCCCGCTATGAACGCAATCTTGATGGTCATTCAGCTTGTTG
GAGGTTGTATGACCATCTCATCATCGAGTGAGACCGTGGCAACGGGAACA
AAGCTCGCTATCGCTCTCTTCGTGGTCCAGACAATTTTTTGGGGATTCAC
TATGGCAGAAAATATCTGCATGAGCTATCGCCTGGGTCGCCATCCCACAA
CTGCTAGCAGCTGCGTGTTAGCCAACTGGAAGACATGGAACCAATTGATC
CCGTTAGCAGGGTCTATCATTGCGACTGGACGCAACATAATGCGGCTGAC
AATGGCAGGTGGCATTGAGTTTCTCGTGGACTATGAATGGCCTTCGTATG
CATTTGATGGGTATCAGATGGTGGTGGTTCTGGGCGCTTGGGGGATTTGG
TACTTACCGGGGAAGTCTCGCGAACTCTCGACTCGAGTGCGTTATACGAA
CCTCACTCGGCTGGAGAGGGTCGTTGATGATGTTTAA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:428977..429863- >CAN33_16850-T1 ID=CAN33_16850-T1|Name=CAN33_16850-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1668bp|location=Sequence derived from alignment at NKJJ01000011.1:428977..429863- (Aspergillus niger FDAARGOS_311)
AGTTAATCGGACATACGGCTCGATCCTTCTCGACCCAAGATGTCTGCGAT
AGAGGCGCGTACGGTGTGCAATCAGTCGCACTATTGATGGGACCGACATT
GATCATGTTTTCCGTCAACCTGACTCAGAGTGAGTTCGTCAACGTGCTTG
ATGCCGAACAATTCTGTTTGCTCCCACTGGCGTGGCAGCGGGGCGTTTAT
CCCGCTATGAACGCAATCTTGATGGTCATTCAGCTTGTTGGAGGTTGTAT
GACCATCTCATCATCGAGTGAGACCGTGGCAACGGGAACAAAGCTCGCTA
TCGCTCTCTTCGTGGTCCAGACAATTTTTTGGGGATTCACTATGGCAGAA
AATATCTGCATGAGCTATCGCCTGGGTCGCCATCCCACAACTGCTAGCAG
CTGCGTGTTAGCCAACTGGAAGACATGGAACCAATTGATCCCGTTAGCAG
GGTCTATCATTGCGACTGGACGCAACATAATGCGGCTGACAATGGCAGGT
GGCATTGAGTTTCTCGTGGACTATGAATGGCCTTCGTATGCATTTGATGG
GTATCAGATGGTGGTGGTTCTGGGCGCTTGGGGGATTTGGTACTTACCGG
GGAAGTCTCGCGAACTCTCGACTCGAGTGCGTTATACGAACCTCACTCGG
CTGGAGAGGGTCGTTGATGATGTTTAAATGGCTTCTACGCAGTGCGAGTT
GTATATGTATACACCCAGCCTTGCATTGGCGATTATCGGAGTCATTCTAT
TCTCTGCCTTGACCACGATCCACCTGTACCGTATGATTGAATCAAAAGCG
TGGTATGGCATATTCTTCGTTCTTGGTGGTCTGGAGTTAATCGGACATAC
GGCTCGATCCTTCTCGACCCAAGATGTCTGCGATAGAGGCGCGTACGGTG
TGCAATCAGTCGCACTATTGATGGGACCGACATTGATCATGTTTTCCGTC
AACCTGACTCAGAGTGAGTTCGTCAACGTGCTTGATGCCGAACAATTCTG
TTTGCTCCCACTGGCGTGGCAGCGGGGCGTTTATCCCGCTATGAACGCAA
TCTTGATGGTCATTCAGCTTGTTGGAGGTTGTATGACCATCTCATCATCG
AGTGAGACCGTGGCAACGGGAACAAAGCTCGCTATCGCTCTCTTCGTGGT
CCAGACAATTTTTTGGGGATTCACTATGGCAGAAAATATCTGCATGAGCT
ATCGCCTGGGTCGCCATCCCACAACTGCTAGCAGCTGCGTGTTAGCCAAC
TGGAAGACATGGAACCAATTGATCCCGTTAGCAGGGTCTATCATTGCGAC
TGGACGCAACATAATGCGGCTGACAATGGCAGGTGGCATTGAGTTTCTCG
TGGACTATGAATGGCCTTCGTATGCATTTGATGGGTATCAGATGGTGGTG
GTTCTGGGCGCTTGGGGGATTTGGTACTTACCGGGGAAGTCTCGCGAACT
CTCGACTCGAGTGCGTTATACGAACCTCACTCGGCTGGAGAGGGTCGTTG
ATGATGTTTAAATGGCTTCTACGCAGTGCGAGTTGTATATGTATACACCC
AGCCTTGCATTGGCGATTATCGGAGTCATTCTATTCTCTGCCTTGACCAC
GATCCACCTGTACCGTATGATTGAATCAAAAGCGTGGTATGGCATATTCT
TCGTTCTTGGTGGTCTGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000111.4 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | RTA1 like protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:428977..429863 - |
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