You are here

Home

CAN33_16890-T1, CAN33_16890-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_16890-T1
Unique NameCAN33_16890-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:451874..452853+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_16890-T1 ID=CAN33_16890-T1|Name=CAN33_16890-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=980bp|location=Sequence derived from alignment at NKJJ01000011.1:451874..452853+ (Aspergillus niger FDAARGOS_311)
ATGTCTGACTACACATACCAACATTTCAACGTCACATTCCCGCCGGAACG
TCAATATGTCGCCCACGTGGAGATCAACCGCGCCGACAAAATGAATGCCT
TCTTCGAAAGGTACCATCCCCCCTCTCCCTCCCCCTTTCTTCTGCCTAAA
ACTAATATGTAATCCATCCTCCAGCATGTGGCTGGAACTCTCTGCCATCT
TCACCCGCCTCTCCTCGGACTCCTCCGTTCGCGCCATCGTCCTCTCCGGT
GCCGGCGACCGCGCATTCACCGCCGGCCTCGACGTCAAAGCCGCCTCCGA
GGGCCTCCTCTCCGACACCAACACCGCCAGCGATCCCGCCCGCAAAGCTG
CCCAGATGCGGCGCCACATTGACGAGTTGCAGGGATGCATCTCGTCTATT
GAAAAGTGCGAGAAACCGGTGATCGTGGCCTACCACGGTATCTCCTATGG
TCTCGCTGTTGACATCGGGGTGGCCGCTGATGTGCGGGTATGCTCGGCGG
ATGTCCGCTTTGCCGTGAAAGAAGTAGACATTGGTCTGGCAGCAGATGTC
GGGACATTGAGTCGGTTGCCCAAGGTGGTTGGGAATTATGGATGGGTGAA
AGAGGTGGCTTTGACGGCGAGGAACTTTGACGCGGAAGAAGCTCTACGCG
TGGGATACGTCAATCGCGTGTTCAAGAATAAAGAGGAGACAGTCCGAGGC
GCATTGGAACTGGCACAGTCAATAGGCACCAAGAGTCCTGTTGCGGTGCA
GGGGACCAAGGAATTGCTGAATTATTCGAGGGATCATACCGTTCCGGAGG
GTAAGTACTACTCCACAGTGTTTCGGAGTCCAGATGTATGTGGATGCTAA
TGCTGTATTTCACGCTATAGGACTGCGGTATACGGCTGTCTGGAACAGCG
CAATGCTACAGACCAAGGACGTCACTGCTGCGCTGCTGTCGGGCATCCAG
AAGAGAAAGCCGACGTTCGAGAAGTTGTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000011.1:451874..452853+

>CAN33_16890-T1 ID=CAN33_16890-T1|Name=CAN33_16890-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2538bp|location=Sequence derived from alignment at NKJJ01000011.1:451874..452853+ (Aspergillus niger FDAARGOS_311)
ATGTCTGACTACACATACCAACATTTCAACGTCACATTCCCGCCGGAACG
TCAATATGTCGCCCACGTGGAGATCAACCGCGCCGACAAAATGAATGCCT
TCTTCGAAAGCATGTGGCTGGAACTCTCTGCCATCTTCACCCGCCTCTCC
TCGGACTCCTCCGTTCGCGCCATCGTCCTCTCCGGTGCCGGCGACCGCGC
ATTCACCGCCGGCCTCGACGTCAAAGCCGCCTCCGAGGGCCTCCTCTCCG
ACACCAACACCGCCAGCGATCCCGCCCGCAAAGCTGCCCAGATGCGGCGC
CACATTGACGAGTTGCAGGGATGCATCTCGTCTATTGAAAAGTGCGAGAA
ACCGGTGATCGTGGCCTACCACGGTATCTCCTATGGTCTCGCTGTTGACA
TCGGGGTGGCCGCTGATGTGCGGGTATGCTCGGCGGATGTCCGCTTTGCC
GTGAAAGAAGTAGACATTGGTCTGGCAGCAGATGTCGGGACATTGAGTCG
GTTGCCCAAGGTGGTTGGGAATTATGGATGGGTGAAAGAGGTGGCTTTGA
CGGCGAGGAACTTTGACGCGGAAGAAGCTCTACGCGTGGGATACGTCAAT
CGCGTGTTCAAGAATAAAGAGGAGACAGTCCGAGGCGCATTGGAACTGGC
ACAGTCAATAGGCACCAAGAGTCCTGTTGCGGTGCAGGGGACCAAGGAAT
TGCTGAATTATTCGAGGGATCATACCGTTCCGGAGGGACTGCGGTATACG
GCTGTCTGGAACAGCGCAATGCTACAGACCAAGGACGTCACTGCTGCGCT
GCTGTCGGGCATCCAGAAGAGAAAGCCGACGTTCGAGAAGTTGTAGATGT
CTGACTACACATACCAACATTTCAACGTCACATTCCCGCCGGAACGTCAA
TATGTCGCCCACGTGGAGATCAACCGCGCCGACAAAATGAATGCCTTCTT
CGAAAGCATGTGGCTGGAACTCTCTGCCATCTTCACCCGCCTCTCCTCGG
ACTCCTCCGTTCGCGCCATCGTCCTCTCCGGTGCCGGCGACCGCGCATTC
ACCGCCGGCCTCGACGTCAAAGCCGCCTCCGAGGGCCTCCTCTCCGACAC
CAACACCGCCAGCGATCCCGCCCGCAAAGCTGCCCAGATGCGGCGCCACA
TTGACGAGTTGCAGGGATGCATCTCGTCTATTGAAAAGTGCGAGAAACCG
GTGATCGTGGCCTACCACGGTATCTCCTATGGTCTCGCTGTTGACATCGG
GGTGGCCGCTGATGTGCGGGTATGCTCGGCGGATGTCCGCTTTGCCGTGA
AAGAAGTAGACATTGGTCTGGCAGCAGATGTCGGGACATTGAGTCGGTTG
CCCAAGGTGGTTGGGAATTATGGATGGGTGAAAGAGGTGGCTTTGACGGC
GAGGAACTTTGACGCGGAAGAAGCTCTACGCGTGGGATACGTCAATCGCG
TGTTCAAGAATAAAGAGGAGACAGTCCGAGGCGCATTGGAACTGGCACAG
TCAATAGGCACCAAGAGTCCTGTTGCGGTGCAGGGGACCAAGGAATTGCT
GAATTATTCGAGGGATCATACCGTTCCGGAGGGACTGCGGTATACGGCTG
TCTGGAACAGCGCAATGCTACAGACCAAGGACGTCACTGCTGCGCTGCTG
TCGGGCATCCAGAAGAGAAAGCCGACGTTCGAGAAGTTGTAGATGTCTGA
CTACACATACCAACATTTCAACGTCACATTCCCGCCGGAACGTCAATATG
TCGCCCACGTGGAGATCAACCGCGCCGACAAAATGAATGCCTTCTTCGAA
AGCATGTGGCTGGAACTCTCTGCCATCTTCACCCGCCTCTCCTCGGACTC
CTCCGTTCGCGCCATCGTCCTCTCCGGTGCCGGCGACCGCGCATTCACCG
CCGGCCTCGACGTCAAAGCCGCCTCCGAGGGCCTCCTCTCCGACACCAAC
ACCGCCAGCGATCCCGCCCGCAAAGCTGCCCAGATGCGGCGCCACATTGA
CGAGTTGCAGGGATGCATCTCGTCTATTGAAAAGTGCGAGAAACCGGTGA
TCGTGGCCTACCACGGTATCTCCTATGGTCTCGCTGTTGACATCGGGGTG
GCCGCTGATGTGCGGGTATGCTCGGCGGATGTCCGCTTTGCCGTGAAAGA
AGTAGACATTGGTCTGGCAGCAGATGTCGGGACATTGAGTCGGTTGCCCA
AGGTGGTTGGGAATTATGGATGGGTGAAAGAGGTGGCTTTGACGGCGAGG
AACTTTGACGCGGAAGAAGCTCTACGCGTGGGATACGTCAATCGCGTGTT
CAAGAATAAAGAGGAGACAGTCCGAGGCGCATTGGAACTGGCACAGTCAA
TAGGCACCAAGAGTCCTGTTGCGGTGCAGGGGACCAAGGAATTGCTGAAT
TATTCGAGGGATCATACCGTTCCGGAGGGACTGCGGTATACGGCTGTCTG
GAACAGCGCAATGCTACAGACCAAGGACGTCACTGCTGCGCTGCTGTCGG
GCATCCAGAAGAGAAAGCCGACGTTCGAGAAGTTGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_16890CAN33_16890Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16890-T1.exon1CAN33_16890-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_16890-T1.exon2CAN33_16890-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_16890-T1.exon3CAN33_16890-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16890-T1.cdsCAN33_16890-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16890-T1CAN33_16890-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029045
DBxrefInterPro:IPR014748
DBxrefInterPro:IPR001753
DBxrefPFAM:PF16113
DBxrefPFAM:PF00378
ProductEnoyl-CoA hydratase/isomerase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:451874..452853 +
Powered by Drupal