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CAN33_16920-T1, CAN33_16920-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_16920-T1
Unique NameCAN33_16920-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:473914..474749+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_16920-T1 ID=CAN33_16920-T1|Name=CAN33_16920-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=836bp|location=Sequence derived from alignment at NKJJ01000011.1:473914..474749+ (Aspergillus niger FDAARGOS_311)
ATGAAGGTCTCCAGCCTCCCCATCTTAGCCTTCCTCCCTACCTCCCTCGC
CACAACCATCTACCTGGCGGGGGACTCCACCATGGCCACTGGCGGCGGTG
GTTCCGACACAGCAGGTACTTTCCCACCTACACCATCACACCTTCATCCA
CTAACAAACAATCAGGCTGGGGTGACTACGTCGCCCAATACCTGAGCAAC
TCAAGCGGCATCACCGTGTCCAACCAAGCCGTAGCCGGGCGCAGCGCACG
GTCCTACACGCGCGAAGGCCGGTTCGACGACATCGCCAGCACCCTTGAAG
CGGGCGACTACGTGATCATCGAGTTCGGTCACAACGACGGCGGCACGCTC
AGCTCGACCAGCGACAACGGCCGCACCGACTGTTCCGGCACGGGCTCCGA
AGTATGCTACTCGGAATACGACGGCGTCAATGAAACCATCCTCACCTTCC
CTGCATACCTCGAGAACGCCGCCAATACATTCAAAAAAATCGGCGCGACC
GTCATCATCTCTTCGCAGACGCCCGATAACCCCTGGGAAACAGGCACTTT
CGTGGATGACCCGCCGCGGTTCGTCGAATACGCGGAGATCGCGGCGGACA
CGGCGGATACGTCGTACGTGAATCATTTTGCCTATGTGGATCAGGTGTAT
GAGGCGTTGGGAGCGGATACCGTGGATGCATTTTATCCGATTGATCATAC
GCATACGAGTCCGGCGGGGGCGGATGTTGTTGCTAAGGCGTTTCTGAGGG
GTGTGGTCTGTGGAAAGTTGAGCTTGGCGGATGAGCTTGTGACGGATGAT
TTGGAGTTGGATGAGTATGAATGTTTGGATGAGTAG
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Coding sequence (CDS) from alignment at NKJJ01000011.1:473914..474749+

>CAN33_16920-T1 ID=CAN33_16920-T1|Name=CAN33_16920-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1572bp|location=Sequence derived from alignment at NKJJ01000011.1:473914..474749+ (Aspergillus niger FDAARGOS_311)
ATGAAGGTCTCCAGCCTCCCCATCTTAGCCTTCCTCCCTACCTCCCTCGC
CACAACCATCTACCTGGCGGGGGACTCCACCATGGCCACTGGCGGCGGTG
GTTCCGACACAGCAGGCTGGGGTGACTACGTCGCCCAATACCTGAGCAAC
TCAAGCGGCATCACCGTGTCCAACCAAGCCGTAGCCGGGCGCAGCGCACG
GTCCTACACGCGCGAAGGCCGGTTCGACGACATCGCCAGCACCCTTGAAG
CGGGCGACTACGTGATCATCGAGTTCGGTCACAACGACGGCGGCACGCTC
AGCTCGACCAGCGACAACGGCCGCACCGACTGTTCCGGCACGGGCTCCGA
AGTATGCTACTCGGAATACGACGGCGTCAATGAAACCATCCTCACCTTCC
CTGCATACCTCGAGAACGCCGCCAATACATTCAAAAAAATCGGCGCGACC
GTCATCATCTCTTCGCAGACGCCCGATAACCCCTGGGAAACAGGCACTTT
CGTGGATGACCCGCCGCGGTTCGTCGAATACGCGGAGATCGCGGCGGACA
CGGCGGATACGTCGTACGTGAATCATTTTGCCTATGTGGATCAGGTGTAT
GAGGCGTTGGGAGCGGATACCGTGGATGCATTTTATCCGATTGATCATAC
GCATACGAGTCCGGCGGGGGCGGATGTTGTTGCTAAGGCGTTTCTGAGGG
GTGTGGTCTGTGGAAAGTTGAGCTTGGCGGATGAGCTTGTGACGGATGAT
TTGGAGTTGGATGAGTATGAATGTTTGGATGAGTAGATGAAGGTCTCCAG
CCTCCCCATCTTAGCCTTCCTCCCTACCTCCCTCGCCACAACCATCTACC
TGGCGGGGGACTCCACCATGGCCACTGGCGGCGGTGGTTCCGACACAGCA
GGCTGGGGTGACTACGTCGCCCAATACCTGAGCAACTCAAGCGGCATCAC
CGTGTCCAACCAAGCCGTAGCCGGGCGCAGCGCACGGTCCTACACGCGCG
AAGGCCGGTTCGACGACATCGCCAGCACCCTTGAAGCGGGCGACTACGTG
ATCATCGAGTTCGGTCACAACGACGGCGGCACGCTCAGCTCGACCAGCGA
CAACGGCCGCACCGACTGTTCCGGCACGGGCTCCGAAGTATGCTACTCGG
AATACGACGGCGTCAATGAAACCATCCTCACCTTCCCTGCATACCTCGAG
AACGCCGCCAATACATTCAAAAAAATCGGCGCGACCGTCATCATCTCTTC
GCAGACGCCCGATAACCCCTGGGAAACAGGCACTTTCGTGGATGACCCGC
CGCGGTTCGTCGAATACGCGGAGATCGCGGCGGACACGGCGGATACGTCG
TACGTGAATCATTTTGCCTATGTGGATCAGGTGTATGAGGCGTTGGGAGC
GGATACCGTGGATGCATTTTATCCGATTGATCATACGCATACGAGTCCGG
CGGGGGCGGATGTTGTTGCTAAGGCGTTTCTGAGGGGTGTGGTCTGTGGA
AAGTTGAGCTTGGCGGATGAGCTTGTGACGGATGATTTGGAGTTGGATGA
GTATGAATGTTTGGATGAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RHA1CAN33_16920Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16920-T1.exon1CAN33_16920-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_16920-T1.exon2CAN33_16920-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16920-T1.cdsCAN33_16920-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16920-T1CAN33_16920-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-17)
NoteCAZy:CE12
DBxrefInterPro:IPR037459
DBxrefInterPro:IPR013830
DBxrefInterPro:IPR036514
DBxrefPFAM:PF13472
DBxrefPFAM:PF00657
ProductRhamnogalacturonan acetylesterase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:473914..474749 +
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