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CAN33_16940-T1, CAN33_16940-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_16940-T1
Unique NameCAN33_16940-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:486947..487426-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_16940-T1 ID=CAN33_16940-T1|Name=CAN33_16940-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=480bp|location=Sequence derived from alignment at NKJJ01000011.1:486947..487426- (Aspergillus niger FDAARGOS_311)
ATGTCTCATCTTCAGTATTACGCATACCCTGGTTATGGCACTCGCAGCCA
AACGGACCTTTACTACAGCCAGGCAGTTAAAGTAGGGGATCGCATCGAGT
GCTCCGGTCAAGGTTTGTAACTCATATGTTCCATCCCAGTCCTGTTATAA
TCCTATGACATCGATGGATTATTAACCCTAAAACTAGGTGGATGGGATCC
TTCGACCTCAAAGATCAACCCCGAAATCAACGCTCAAATTGACCAGGCTT
TTGCGAATGTCGAGCTTACCCTGAAAACAGCGGGTGGTCAAGGATGGAGT
CAAGTGTATCGCGTTAACTCTTACCACCTTCCTCTCAACGATGAGGCGTT
GAACGCAATGGTTCGGAATTTGAGAAAGTATATGCCCAACCACCAACCTA
TTTGGACGTGTATTGGCGTGTCGCGGTTGGCTTACGATGATATGAGGGTT
GAAATTGAAGTCACGGCGCATGTTCCTTAG
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Coding sequence (CDS) from alignment at NKJJ01000011.1:486947..487426-

>CAN33_16940-T1 ID=CAN33_16940-T1|Name=CAN33_16940-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=810bp|location=Sequence derived from alignment at NKJJ01000011.1:486947..487426- (Aspergillus niger FDAARGOS_311)
GTGGATGGGATCCTTCGACCTCAAAGATCAACCCCGAAATCAACGCTCAA
ATTGACCAGGCTTTTGCGAATGTCGAGCTTACCCTGAAAACAGCGGGTGG
TCAAGGATGGAGTCAAGTGTATCGCGTTAACTCTTACCACCTTCCTCTCA
ACGATGAGGCGTTGAACGCAATGGTTCGGAATTTGAGAAAGTATATGCCC
AACCACCAACCTATTTGGACGTGTATTGGCGTGTCGCGGTTGGCTTACGA
TGATATGAGGGTTGAAATTGAAGTCACGGCGCATGTTCCTTAGATGTCTC
ATCTTCAGTATTACGCATACCCTGGTTATGGCACTCGCAGCCAAACGGAC
CTTTACTACAGCCAGGCAGTTAAAGTAGGGGATCGCATCGAGTGCTCCGG
TCAAGGTGGATGGGATCCTTCGACCTCAAAGATCAACCCCGAAATCAACG
CTCAAATTGACCAGGCTTTTGCGAATGTCGAGCTTACCCTGAAAACAGCG
GGTGGTCAAGGATGGAGTCAAGTGTATCGCGTTAACTCTTACCACCTTCC
TCTCAACGATGAGGCGTTGAACGCAATGGTTCGGAATTTGAGAAAGTATA
TGCCCAACCACCAACCTATTTGGACGTGTATTGGCGTGTCGCGGTTGGCT
TACGATGATATGAGGGTTGAAATTGAAGTCACGGCGCATGTTCCTTAGAT
GTCTCATCTTCAGTATTACGCATACCCTGGTTATGGCACTCGCAGCCAAA
CGGACCTTTACTACAGCCAGGCAGTTAAAGTAGGGGATCGCATCGAGTGC
TCCGGTCAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_16940CAN33_16940Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16940-T1CAN33_16940-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16940-T1.cdsCAN33_16940-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_16940-T1.exon2CAN33_16940-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_16940-T1.exon1CAN33_16940-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR035959
DBxrefInterPro:IPR006175
DBxrefPFAM:PF01042
ProductEndoribonuclease L-PSP family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:486947..487426 -
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