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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:530988..531941+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_17020-T1 ID=CAN33_17020-T1|Name=CAN33_17020-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=954bp|location=Sequence derived from alignment at NKJJ01000011.1:530988..531941+ (Aspergillus niger FDAARGOS_311)
ATGACAGTTGCAACATTCAACCCGCAATTGCGACTCCTTAATGCTCTCCG
AGCAAATGCAAAGCCCATAATGACATTTCTGGGTCTTCCTTCTTTCCGCA
CAGCTCAAATAGTAGCCCAGACCGGCCTTGACGTCAGTAACTATCCCACC
CATCAATCCACCCGCTAAGCTGATAATCAAAAAGGGCATTATCATCGACT
GCGAGCACGGCCACATAAGCGATGACTCAATGCACAGTGCAACAGCAGCT
ATAGCTTCATTAGGAGTATCACCGCTTGTCCGTCTGCGAATGACTCACTC
GGACTTAATTAAACGGGCCCTGGATGCCGGCGCACAGTAAGTAGCACTAC
AGTTTACTTATTATTGATATATAATATACTTATACTAATCGATATACAAG
CGGAATCGTGGTCCCGCAAATCAACACCGCCGAAGAAGCCCAAACAGTGG
TCTCTTACTCCAAGTTTCCCCCACAAGGGCTTCGCGGACAAGGATCGGCC
TTCCCGGCGTTTACGCACAGTATTGATCTCCCGACGTATATCAAGACAGC
GAATGAGACCTTGATTACGTGTATTCAGATAGAAACTAAACAGGGAGTTG
AGAATGTTGAGGAGATTTGTGCGGTACCTGGTGTTGGTGAGTTGCGCCTA
TACTCGTTTGTCGATGGTGTCAAGTGGGCTGACTAGAATAGATATGATTT
TCATTGGTCCAAACGACCTAGCACTGTCACTATTAGGTTACGTGCCCGCG
AGAGGTGACGAGCCTGAGTTTGTGCAAGCTATTGAGAGAATTGTAGCTGG
GGCTCGGAAACATGGGAAGTGGGTTGGTAGGCTCTCGAATAATGGGACGT
TGGGCAGGGAGCACTTGAAAGTCTTTGATACGGTGGCATTGAGCTATGAT
ATTCGGGCGATGCAGAATTGGTATACTAGTGAGTTGCAGGTGGCGCGGTC
GTGA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:530988..531941+ >CAN33_17020-T1 ID=CAN33_17020-T1|Name=CAN33_17020-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3132bp|location=Sequence derived from alignment at NKJJ01000011.1:530988..531941+ (Aspergillus niger FDAARGOS_311)
ATGACAGTTGCAACATTCAACCCGCAATTGCGACTCCTTAATGCTCTCCG
AGCAAATGCAAAGCCCATAATGACATTTCTGGGTCTTCCTTCTTTCCGCA
CAGCTCAAATAGTAGCCCAGACCGGCCTTGACGGCATTATCATCGACTGC
GAGCACGGCCACATAAGCGATGACTCAATGCACAGTGCAACAGCAGCTAT
AGCTTCATTAGGAGTATCACCGCTTGTCCGTCTGCGAATGACTCACTCGG
ACTTAATTAAACGGGCCCTGGATGCCGGCGCACACGGAATCGTGGTCCCG
CAAATCAACACCGCCGAAGAAGCCCAAACAGTGGTCTCTTACTCCAAGTT
TCCCCCACAAGGGCTTCGCGGACAAGGATCGGCCTTCCCGGCGTTTACGC
ACAGTATTGATCTCCCGACGTATATCAAGACAGCGAATGAGACCTTGATT
ACGTGTATTCAGATAGAAACTAAACAGGGAGTTGAGAATGTTGAGGAGAT
TTGTGCGGTACCTGGTGTTGATATGATTTTCATTGGTCCAAACGACCTAG
CACTGTCACTATTAGGTTACGTGCCCGCGAGAGGTGACGAGCCTGAGTTT
GTGCAAGCTATTGAGAGAATTGTAGCTGGGGCTCGGAAACATGGGAAGTG
GGTTGGTAGGCTCTCGAATAATGGGACGTTGGGCAGGGAGCACTTGAAAG
TCTTTGATACGGTGGCATTGAGCTATGATATTCGGGCGATGCAGAATTGG
TATACTAGTGAGTTGCAGGTGGCGCGGTCGTGAATGACAGTTGCAACATT
CAACCCGCAATTGCGACTCCTTAATGCTCTCCGAGCAAATGCAAAGCCCA
TAATGACATTTCTGGGTCTTCCTTCTTTCCGCACAGCTCAAATAGTAGCC
CAGACCGGCCTTGACGGCATTATCATCGACTGCGAGCACGGCCACATAAG
CGATGACTCAATGCACAGTGCAACAGCAGCTATAGCTTCATTAGGAGTAT
CACCGCTTGTCCGTCTGCGAATGACTCACTCGGACTTAATTAAACGGGCC
CTGGATGCCGGCGCACACGGAATCGTGGTCCCGCAAATCAACACCGCCGA
AGAAGCCCAAACAGTGGTCTCTTACTCCAAGTTTCCCCCACAAGGGCTTC
GCGGACAAGGATCGGCCTTCCCGGCGTTTACGCACAGTATTGATCTCCCG
ACGTATATCAAGACAGCGAATGAGACCTTGATTACGTGTATTCAGATAGA
AACTAAACAGGGAGTTGAGAATGTTGAGGAGATTTGTGCGGTACCTGGTG
TTGATATGATTTTCATTGGTCCAAACGACCTAGCACTGTCACTATTAGGT
TACGTGCCCGCGAGAGGTGACGAGCCTGAGTTTGTGCAAGCTATTGAGAG
AATTGTAGCTGGGGCTCGGAAACATGGGAAGTGGGTTGGTAGGCTCTCGA
ATAATGGGACGTTGGGCAGGGAGCACTTGAAAGTCTTTGATACGGTGGCA
TTGAGCTATGATATTCGGGCGATGCAGAATTGGTATACTAGTGAGTTGCA
GGTGGCGCGGTCGTGAATGACAGTTGCAACATTCAACCCGCAATTGCGAC
TCCTTAATGCTCTCCGAGCAAATGCAAAGCCCATAATGACATTTCTGGGT
CTTCCTTCTTTCCGCACAGCTCAAATAGTAGCCCAGACCGGCCTTGACGG
CATTATCATCGACTGCGAGCACGGCCACATAAGCGATGACTCAATGCACA
GTGCAACAGCAGCTATAGCTTCATTAGGAGTATCACCGCTTGTCCGTCTG
CGAATGACTCACTCGGACTTAATTAAACGGGCCCTGGATGCCGGCGCACA
CGGAATCGTGGTCCCGCAAATCAACACCGCCGAAGAAGCCCAAACAGTGG
TCTCTTACTCCAAGTTTCCCCCACAAGGGCTTCGCGGACAAGGATCGGCC
TTCCCGGCGTTTACGCACAGTATTGATCTCCCGACGTATATCAAGACAGC
GAATGAGACCTTGATTACGTGTATTCAGATAGAAACTAAACAGGGAGTTG
AGAATGTTGAGGAGATTTGTGCGGTACCTGGTGTTGATATGATTTTCATT
GGTCCAAACGACCTAGCACTGTCACTATTAGGTTACGTGCCCGCGAGAGG
TGACGAGCCTGAGTTTGTGCAAGCTATTGAGAGAATTGTAGCTGGGGCTC
GGAAACATGGGAAGTGGGTTGGTAGGCTCTCGAATAATGGGACGTTGGGC
AGGGAGCACTTGAAAGTCTTTGATACGGTGGCATTGAGCTATGATATTCG
GGCGATGCAGAATTGGTATACTAGTGAGTTGCAGGTGGCGCGGTCGTGAA
TGACAGTTGCAACATTCAACCCGCAATTGCGACTCCTTAATGCTCTCCGA
GCAAATGCAAAGCCCATAATGACATTTCTGGGTCTTCCTTCTTTCCGCAC
AGCTCAAATAGTAGCCCAGACCGGCCTTGACGGCATTATCATCGACTGCG
AGCACGGCCACATAAGCGATGACTCAATGCACAGTGCAACAGCAGCTATA
GCTTCATTAGGAGTATCACCGCTTGTCCGTCTGCGAATGACTCACTCGGA
CTTAATTAAACGGGCCCTGGATGCCGGCGCACACGGAATCGTGGTCCCGC
AAATCAACACCGCCGAAGAAGCCCAAACAGTGGTCTCTTACTCCAAGTTT
CCCCCACAAGGGCTTCGCGGACAAGGATCGGCCTTCCCGGCGTTTACGCA
CAGTATTGATCTCCCGACGTATATCAAGACAGCGAATGAGACCTTGATTA
CGTGTATTCAGATAGAAACTAAACAGGGAGTTGAGAATGTTGAGGAGATT
TGTGCGGTACCTGGTGTTGATATGATTTTCATTGGTCCAAACGACCTAGC
ACTGTCACTATTAGGTTACGTGCCCGCGAGAGGTGACGAGCCTGAGTTTG
TGCAAGCTATTGAGAGAATTGTAGCTGGGGCTCGGAAACATGGGAAGTGG
GTTGGTAGGCTCTCGAATAATGGGACGTTGGGCAGGGAGCACTTGAAAGT
CTTTGATACGGTGGCATTGAGCTATGATATTCGGGCGATGCAGAATTGGT
ATACTAGTGAGTTGCAGGTGGCGCGGTCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006629 | lipid metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008081 | phosphoric diester hydrolase activity |
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR015813 |
| DBxref | InterPro:IPR030395 |
| DBxref | InterPro:IPR005000 |
| DBxref | InterPro:IPR040442 |
| DBxref | PFAM:PF03328 |
| Product | HpcH/HpaI aldolase/citrate lyase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:530988..531941 + |
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