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CAN33_17035-T1, CAN33_17035-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_17035-T1
Unique NameCAN33_17035-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:536020..537276+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_17035-T1 ID=CAN33_17035-T1|Name=CAN33_17035-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1257bp|location=Sequence derived from alignment at NKJJ01000011.1:536020..537276+ (Aspergillus niger FDAARGOS_311)
ATGTCTCTGTCCAAGAACTTCATCCGCTCAAGCCGCACCACCCAGCAATC
GCTATGTCGATGCAGCATATCCCGCCGACAGGTGCAGCCTTCACAGGAAC
GCCACTTTAGCCGATCTCGCGCTGTCGCCGCCCCAGTGACCGGAGCAAGT
GAAGCCGAAGTCCAAGCAGCTCAGAAGTACTGCTCGAATCTTCTTCTGTA
AAGTCTTTCCAATTGATTAACCGTTTCAACCGGCAATCTATCTAATACAT
TCTTGGATTATGCCAGACAATATGACCGTCCCTCCTATACCCTGAGCACC
TTCATCCCCCGAAATGCGCAATCTTTCTACATCGCTCTTCGAGCTCTTAA
TGTCTCTCTTTCCCTAATCCCCGACACCACCTCCTCCCACACCATCGGGC
TTATGCGCCTCCAATTCTGGCGCGATGCAGTTGCCAAAACACTATCCGGT
TCACCCCCGAAAGAGCCAATTGCTATTCTCCTCGCCTCTGCCATTTCAGA
CCTATCCGAGCGAACACAAGGCCGGGCGCGCATCAGCAAAGGCTGGCTGA
ACAGAATGATCAATGCCCGCGAACAAACCCTTACCAACGACCCGTACCCT
GATATCGCGGCACTCGAGTCCTACGCCGAAAGCACATACTCGACATTGCT
CTACCTCACACTCTCAGCACTCCCCATGACCTCGGTAACGGCGGATCATG
TGGCGTCGCATATTGGAAAGGCAGCCGGTATCACAGCTGTACTTCGTGGT
TTGCCATTGGTAGCATTCCCGGGTGCATCAACCCAACGTCCCGACCAGGC
TGGTACGACAATGGCCGGAGGAGCTAAGCAGGGAGCCGTAATGCTGCCAT
TGGATGTAATGGCGCAGGCTGGGGTGAAAGAAGAAGAGGTGTTTCGCCTG
GGCAGTGAGGCGCCAGGATTGCGGGATGCTGTTTTTACGGTGGCCACTCG
CGCCAGCGACCACCTGATTACCGTGCAGCAGATGCTAAGCAATATTCGTG
CTGGGCAAGATGCAGGACATGATTTTGAGCACGGGCATGAAGAGGATCAT
CAGTATGATCTCGGATCCCAGAATGAGACACCGCTTCAGGAGGTCAATCG
TGCCTTTGGAGTGTTTATGCCGGCCGTTGGAACGCGGCTGTGGCTGGATA
GATTGGAGAGTCATGATTTTGATATCTTCCAGCCTGAACTTCTCCGGTCG
GATTGGAAGCTCCCTTGGAAGGCTTATATGGCTTTTACACGGAAGACATT
CTCTTAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:536020..537276+

>CAN33_17035-T1 ID=CAN33_17035-T1|Name=CAN33_17035-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2376bp|location=Sequence derived from alignment at NKJJ01000011.1:536020..537276+ (Aspergillus niger FDAARGOS_311)
ATGTCTCTGTCCAAGAACTTCATCCGCTCAAGCCGCACCACCCAGCAATC
GCTATGTCGATGCAGCATATCCCGCCGACAGGTGCAGCCTTCACAGGAAC
GCCACTTTAGCCGATCTCGCGCTGTCGCCGCCCCAGTGACCGGAGCAAGT
GAAGCCGAAGTCCAAGCAGCTCAGAAGTACTGCTCGAATCTTCTTCTACA
ATATGACCGTCCCTCCTATACCCTGAGCACCTTCATCCCCCGAAATGCGC
AATCTTTCTACATCGCTCTTCGAGCTCTTAATGTCTCTCTTTCCCTAATC
CCCGACACCACCTCCTCCCACACCATCGGGCTTATGCGCCTCCAATTCTG
GCGCGATGCAGTTGCCAAAACACTATCCGGTTCACCCCCGAAAGAGCCAA
TTGCTATTCTCCTCGCCTCTGCCATTTCAGACCTATCCGAGCGAACACAA
GGCCGGGCGCGCATCAGCAAAGGCTGGCTGAACAGAATGATCAATGCCCG
CGAACAAACCCTTACCAACGACCCGTACCCTGATATCGCGGCACTCGAGT
CCTACGCCGAAAGCACATACTCGACATTGCTCTACCTCACACTCTCAGCA
CTCCCCATGACCTCGGTAACGGCGGATCATGTGGCGTCGCATATTGGAAA
GGCAGCCGGTATCACAGCTGTACTTCGTGGTTTGCCATTGGTAGCATTCC
CGGGTGCATCAACCCAACGTCCCGACCAGGCTGGTACGACAATGGCCGGA
GGAGCTAAGCAGGGAGCCGTAATGCTGCCATTGGATGTAATGGCGCAGGC
TGGGGTGAAAGAAGAAGAGGTGTTTCGCCTGGGCAGTGAGGCGCCAGGAT
TGCGGGATGCTGTTTTTACGGTGGCCACTCGCGCCAGCGACCACCTGATT
ACCGTGCAGCAGATGCTAAGCAATATTCGTGCTGGGCAAGATGCAGGACA
TGATTTTGAGCACGGGCATGAAGAGGATCATCAGTATGATCTCGGATCCC
AGAATGAGACACCGCTTCAGGAGGTCAATCGTGCCTTTGGAGTGTTTATG
CCGGCCGTTGGAACGCGGCTGTGGCTGGATAGATTGGAGAGTCATGATTT
TGATATCTTCCAGCCTGAACTTCTCCGGTCGGATTGGAAGCTCCCTTGGA
AGGCTTATATGGCTTTTACACGGAAGACATTCTCTTAAATGTCTCTGTCC
AAGAACTTCATCCGCTCAAGCCGCACCACCCAGCAATCGCTATGTCGATG
CAGCATATCCCGCCGACAGGTGCAGCCTTCACAGGAACGCCACTTTAGCC
GATCTCGCGCTGTCGCCGCCCCAGTGACCGGAGCAAGTGAAGCCGAAGTC
CAAGCAGCTCAGAAGTACTGCTCGAATCTTCTTCTACAATATGACCGTCC
CTCCTATACCCTGAGCACCTTCATCCCCCGAAATGCGCAATCTTTCTACA
TCGCTCTTCGAGCTCTTAATGTCTCTCTTTCCCTAATCCCCGACACCACC
TCCTCCCACACCATCGGGCTTATGCGCCTCCAATTCTGGCGCGATGCAGT
TGCCAAAACACTATCCGGTTCACCCCCGAAAGAGCCAATTGCTATTCTCC
TCGCCTCTGCCATTTCAGACCTATCCGAGCGAACACAAGGCCGGGCGCGC
ATCAGCAAAGGCTGGCTGAACAGAATGATCAATGCCCGCGAACAAACCCT
TACCAACGACCCGTACCCTGATATCGCGGCACTCGAGTCCTACGCCGAAA
GCACATACTCGACATTGCTCTACCTCACACTCTCAGCACTCCCCATGACC
TCGGTAACGGCGGATCATGTGGCGTCGCATATTGGAAAGGCAGCCGGTAT
CACAGCTGTACTTCGTGGTTTGCCATTGGTAGCATTCCCGGGTGCATCAA
CCCAACGTCCCGACCAGGCTGGTACGACAATGGCCGGAGGAGCTAAGCAG
GGAGCCGTAATGCTGCCATTGGATGTAATGGCGCAGGCTGGGGTGAAAGA
AGAAGAGGTGTTTCGCCTGGGCAGTGAGGCGCCAGGATTGCGGGATGCTG
TTTTTACGGTGGCCACTCGCGCCAGCGACCACCTGATTACCGTGCAGCAG
ATGCTAAGCAATATTCGTGCTGGGCAAGATGCAGGACATGATTTTGAGCA
CGGGCATGAAGAGGATCATCAGTATGATCTCGGATCCCAGAATGAGACAC
CGCTTCAGGAGGTCAATCGTGCCTTTGGAGTGTTTATGCCGGCCGTTGGA
ACGCGGCTGTGGCTGGATAGATTGGAGAGTCATGATTTTGATATCTTCCA
GCCTGAACTTCTCCGGTCGGATTGGAAGCTCCCTTGGAAGGCTTATATGG
CTTTTACACGGAAGACATTCTCTTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_17035CAN33_17035Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17035-T1.exon1CAN33_17035-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_17035-T1.exon2CAN33_17035-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17035-T1.cdsCAN33_17035-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17035-T1CAN33_17035-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR008949
DBxrefPFAM:PF00494
ProductSqualene/phytoene synthase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:536020..537276 +
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