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CAN33_17045-T1, CAN33_17045-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_17045-T1
Unique NameCAN33_17045-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:542287..543102+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_17045-T1 ID=CAN33_17045-T1|Name=CAN33_17045-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=816bp|location=Sequence derived from alignment at NKJJ01000011.1:542287..543102+ (Aspergillus niger FDAARGOS_311)
ATGCTCGCGTGGTGAGTTGAGCAATACCTACCCAATCACCACGGCTGCGA
CCTCCACCCCCCAGACTAACAATAGTAAACTACAGGTACCAGAGATGTCT
TATCCAGCGTCCTCTCTTGACGCAGAGCCTCACCACAGCGGTAAGCTTCA
ATCCCCCCCATATCTCATTCTTTCAGTAAAGCTAAGACGGAAATAATCAG
ACCCTCTTCGCAGTAGGTGACGGCCTCGCCCAACAAGCCGTCGAAAAGAA
GGGCCTGCCCAATCATGATGTAACCCGAACTGGCCGAATGGCTTTATACG
GTGGTGGTAAGCCCAGCCCCCGATCCCTCACCCCCTTCATTCCCTCTAAA
CAAAAGCAAAAATAATATACAGCTGTTTTCGGCCCGGTCGCCACAAAATG
GTTCCAATTCCTACAGAACCGCGTCCAGCTATCAACACCAACCAAGACTC
TTGCGGCGCGCGTTGGTGCTGACCAGCTCGTCTGCGCTCCTACTATGATT
GGTGTCTTCCTCACCAGTATGTCTGTCATGGAGGGTGTCAACCCCCAGGA
GAAGCTCAGTAGGACGTACTGGGATGCGCTGCGCGCCAATTGGATGCTCT
GGCCAGCGGTTCAGACGCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGT
GTGTTGACGGTTAATGTGGTTAATATTGGTATGTATATTTCTCTGCTTCT
TTTCTACGGATGTATCTTGGATATTGGGTAAAGCTAATACTTGGATAGGA
TGGAATTGCTTCCTGAGCTTGGTCAATAGCGTCCCTCATGGGGATGAGGT
TGCACCGGGAGTTTGA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:542287..543102+

>CAN33_17045-T1 ID=CAN33_17045-T1|Name=CAN33_17045-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2730bp|location=Sequence derived from alignment at NKJJ01000011.1:542287..543102+ (Aspergillus niger FDAARGOS_311)
ATGCTCGCGTGGTACCAGAGATGTCTTATCCAGCGTCCTCTCTTGACGCA
GAGCCTCACCACAGCGACCCTCTTCGCAGTAGGTGACGGCCTCGCCCAAC
AAGCCGTCGAAAAGAAGGGCCTGCCCAATCATGATGTAACCCGAACTGGC
CGAATGGCTTTATACGGTGGTGCTGTTTTCGGCCCGGTCGCCACAAAATG
GTTCCAATTCCTACAGAACCGCGTCCAGCTATCAACACCAACCAAGACTC
TTGCGGCGCGCGTTGGTGCTGACCAGCTCGTCTGCGCTCCTACTATGATT
GGTGTCTTCCTCACCAGTATGTCTGTCATGGAGGGTGTCAACCCCCAGGA
GAAGCTCAGTAGGACGTACTGGGATGCGCTGCGCGCCAATTGGATGCTCT
GGCCAGCGGTTCAGACGCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGT
GTGTTGACGGTTAATGTGGTTAATATTGGATGGAATTGCTTCCTGAGCTT
GGTCAATAGCGTCCCTCATGGGGATGAGGTTGCACCGGGAGTTTGAATGC
TCGCGTGGTACCAGAGATGTCTTATCCAGCGTCCTCTCTTGACGCAGAGC
CTCACCACAGCGACCCTCTTCGCAGTAGGTGACGGCCTCGCCCAACAAGC
CGTCGAAAAGAAGGGCCTGCCCAATCATGATGTAACCCGAACTGGCCGAA
TGGCTTTATACGGTGGTGCTGTTTTCGGCCCGGTCGCCACAAAATGGTTC
CAATTCCTACAGAACCGCGTCCAGCTATCAACACCAACCAAGACTCTTGC
GGCGCGCGTTGGTGCTGACCAGCTCGTCTGCGCTCCTACTATGATTGGTG
TCTTCCTCACCAGTATGTCTGTCATGGAGGGTGTCAACCCCCAGGAGAAG
CTCAGTAGGACGTACTGGGATGCGCTGCGCGCCAATTGGATGCTCTGGCC
AGCGGTTCAGACGCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGTGTGT
TGACGGTTAATGTGGTTAATATTGGATGGAATTGCTTCCTGAGCTTGGTC
AATAGCGTCCCTCATGGGGATGAGGTTGCACCGGGAGTTTGAATGCTCGC
GTGGTACCAGAGATGTCTTATCCAGCGTCCTCTCTTGACGCAGAGCCTCA
CCACAGCGACCCTCTTCGCAGTAGGTGACGGCCTCGCCCAACAAGCCGTC
GAAAAGAAGGGCCTGCCCAATCATGATGTAACCCGAACTGGCCGAATGGC
TTTATACGGTGGTGCTGTTTTCGGCCCGGTCGCCACAAAATGGTTCCAAT
TCCTACAGAACCGCGTCCAGCTATCAACACCAACCAAGACTCTTGCGGCG
CGCGTTGGTGCTGACCAGCTCGTCTGCGCTCCTACTATGATTGGTGTCTT
CCTCACCAGTATGTCTGTCATGGAGGGTGTCAACCCCCAGGAGAAGCTCA
GTAGGACGTACTGGGATGCGCTGCGCGCCAATTGGATGCTCTGGCCAGCG
GTTCAGACGCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGTGTGTTGAC
GGTTAATGTGGTTAATATTGGATGGAATTGCTTCCTGAGCTTGGTCAATA
GCGTCCCTCATGGGGATGAGGTTGCACCGGGAGTTTGAATGCTCGCGTGG
TACCAGAGATGTCTTATCCAGCGTCCTCTCTTGACGCAGAGCCTCACCAC
AGCGACCCTCTTCGCAGTAGGTGACGGCCTCGCCCAACAAGCCGTCGAAA
AGAAGGGCCTGCCCAATCATGATGTAACCCGAACTGGCCGAATGGCTTTA
TACGGTGGTGCTGTTTTCGGCCCGGTCGCCACAAAATGGTTCCAATTCCT
ACAGAACCGCGTCCAGCTATCAACACCAACCAAGACTCTTGCGGCGCGCG
TTGGTGCTGACCAGCTCGTCTGCGCTCCTACTATGATTGGTGTCTTCCTC
ACCAGTATGTCTGTCATGGAGGGTGTCAACCCCCAGGAGAAGCTCAGTAG
GACGTACTGGGATGCGCTGCGCGCCAATTGGATGCTCTGGCCAGCGGTTC
AGACGCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGTGTGTTGACGGTT
AATGTGGTTAATATTGGATGGAATTGCTTCCTGAGCTTGGTCAATAGCGT
CCCTCATGGGGATGAGGTTGCACCGGGAGTTTGAATGCTCGCGTGGTACC
AGAGATGTCTTATCCAGCGTCCTCTCTTGACGCAGAGCCTCACCACAGCG
ACCCTCTTCGCAGTAGGTGACGGCCTCGCCCAACAAGCCGTCGAAAAGAA
GGGCCTGCCCAATCATGATGTAACCCGAACTGGCCGAATGGCTTTATACG
GTGGTGCTGTTTTCGGCCCGGTCGCCACAAAATGGTTCCAATTCCTACAG
AACCGCGTCCAGCTATCAACACCAACCAAGACTCTTGCGGCGCGCGTTGG
TGCTGACCAGCTCGTCTGCGCTCCTACTATGATTGGTGTCTTCCTCACCA
GTATGTCTGTCATGGAGGGTGTCAACCCCCAGGAGAAGCTCAGTAGGACG
TACTGGGATGCGCTGCGCGCCAATTGGATGCTCTGGCCAGCGGTTCAGAC
GCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGTGTGTTGACGGTTAATG
TGGTTAATATTGGATGGAATTGCTTCCTGAGCTTGGTCAATAGCGTCCCT
CATGGGGATGAGGTTGCACCGGGAGTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SYM1_1CAN33_17045Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17045-T1CAN33_17045-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17045-T1.exon1CAN33_17045-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_17045-T1.exon2CAN33_17045-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_17045-T1.exon3CAN33_17045-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_17045-T1.exon4CAN33_17045-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_17045-T1.exon5CAN33_17045-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17045-T1.cdsCAN33_17045-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
DBxrefInterPro:IPR007248
DBxrefPFAM:PF04117
ProductProtein required for ethanol metabolism
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:542287..543102 +
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