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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:633068..634399+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_17190-T1 ID=CAN33_17190-T1|Name=CAN33_17190-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1332bp|location=Sequence derived from alignment at NKJJ01000011.1:633068..634399+ (Aspergillus niger FDAARGOS_311)
ATGAGATTAACACTACCGATAGTGTTCTCCTCGTTGGCGGTGGCATCAAC
CGCTCGCCATGGAGAATCATCCCGAGTCTTCAACCGTGACACATCTTCAT
TCATCCATCCAGGCCTCCTCCACACGGCCACAGATTTCTCACGCATCGCC
TCAAAAGTATCCAGCAACACCGAACCATGGCTAACAGGCTGGTACAAACT
CACCAACAGCTCCAACATCAACCTGGACTACACGCCATCCCCAAAGACAA
TCGTCTATCGCGGCGCAGACGGCACCCACACAGAGAACTATCCCTCCCTG
TACAAAGACATCGCAGCCGCCTACGCCATGGCCATCTACTGGAAAGTGAC
CGGCAACACGAGCTACGCCGACGTGGTCGTGAACATCCTCGATGAATGGA
GCTCCACCCTAACCGAAATCTCCGGCACAACTGACATGTACCTCGCCGCA
GGCATCTACGGGTACGAATTCGCCAATGTTGCCGAGATCATGCGCACGTA
TTCCGCATGGCCCAGTGCGAATCTGACCCGCTTTGCGGATATGATGGTCG
ATGTGTTCTATCCCCTTAATCATGATTTCTTGCAGAATCATCATGGCGCG
GCTGTTGATCATTACTGGGCGAATTGGGATTTGTGTAATATCGCCTCGGT
TCTGTCCATTGGGGTGTTGACCGATAACGAAACCATGTTCGATGAGGGGT
TGACTTATTTCAAGTCCGGAGCTGGGAATGGCCAGATTGAAAAGGCGATC
TGGAAGCTGTATCAGGTTGATGGGGAGTCCTTGGGTCAGGGCCAGGAGGC
CGGGCGGGATCAGGGCCACTCGATGTTGGATTTCGCCCTGCTTGGCCCTA
TCGCCCAGACGGCATACAATCAGGGAACGGACCTGTTTGAATATCTGGAT
AATCGCATTCTGGCTGGGTGAGTTACCTCCCATTCTTATACTTGATCATT
ACATTTTCCCTATACCCTTATCCCCAAACCTCTCAACATGGAACATACCG
AAAATATAGAGAACTAACCAATCGCAAGAGCGGAATACGTCGCCAAATAC
AACCTCGGCAATGACGTTCCCTACACGACCTACAACAACAGCGACGACGT
CAACCAGACGGTTATCAGCAATTCCAGCCGCGGGGACATCAGACCCATCT
GGGAGCTGCTGTATCACCACTATGGTGTACTCAAGGGACTGGACGTCACT
TACACAAAGGAGTATCGCGATATGGTCGTTGAGGATGGCGATGGGGCTGA
GGGCGGTGGTGGCGATTATGGAACTACTAGTGGTGGGTATGACCAGTTGG
GATGGGGGACGCTGATGTATACTCTTGAGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:633068..634399+ >CAN33_17190-T1 ID=CAN33_17190-T1|Name=CAN33_17190-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2442bp|location=Sequence derived from alignment at NKJJ01000011.1:633068..634399+ (Aspergillus niger FDAARGOS_311)
ATGAGATTAACACTACCGATAGTGTTCTCCTCGTTGGCGGTGGCATCAAC
CGCTCGCCATGGAGAATCATCCCGAGTCTTCAACCGTGACACATCTTCAT
TCATCCATCCAGGCCTCCTCCACACGGCCACAGATTTCTCACGCATCGCC
TCAAAAGTATCCAGCAACACCGAACCATGGCTAACAGGCTGGTACAAACT
CACCAACAGCTCCAACATCAACCTGGACTACACGCCATCCCCAAAGACAA
TCGTCTATCGCGGCGCAGACGGCACCCACACAGAGAACTATCCCTCCCTG
TACAAAGACATCGCAGCCGCCTACGCCATGGCCATCTACTGGAAAGTGAC
CGGCAACACGAGCTACGCCGACGTGGTCGTGAACATCCTCGATGAATGGA
GCTCCACCCTAACCGAAATCTCCGGCACAACTGACATGTACCTCGCCGCA
GGCATCTACGGGTACGAATTCGCCAATGTTGCCGAGATCATGCGCACGTA
TTCCGCATGGCCCAGTGCGAATCTGACCCGCTTTGCGGATATGATGGTCG
ATGTGTTCTATCCCCTTAATCATGATTTCTTGCAGAATCATCATGGCGCG
GCTGTTGATCATTACTGGGCGAATTGGGATTTGTGTAATATCGCCTCGGT
TCTGTCCATTGGGGTGTTGACCGATAACGAAACCATGTTCGATGAGGGGT
TGACTTATTTCAAGTCCGGAGCTGGGAATGGCCAGATTGAAAAGGCGATC
TGGAAGCTGTATCAGGTTGATGGGGAGTCCTTGGGTCAGGGCCAGGAGGC
CGGGCGGGATCAGGGCCACTCGATGTTGGATTTCGCCCTGCTTGGCCCTA
TCGCCCAGACGGCATACAATCAGGGAACGGACCTGTTTGAATATCTGGAT
AATCGCATTCTGGCTGGAGCGGAATACGTCGCCAAATACAACCTCGGCAA
TGACGTTCCCTACACGACCTACAACAACAGCGACGACGTCAACCAGACGG
TTATCAGCAATTCCAGCCGCGGGGACATCAGACCCATCTGGGAGCTGCTG
TATCACCACTATGGTGTACTCAAGGGACTGGACGTCACTTACACAAAGGA
GTATCGCGATATGGTCGTTGAGGATGGCGATGGGGCTGAGGGCGGTGGTG
GCGATTATGGAACTACTAGTGGTGGGTATGACCAGTTGGGATGGGGGACG
CTGATGTATACTCTTGAGTGAATGAGATTAACACTACCGATAGTGTTCTC
CTCGTTGGCGGTGGCATCAACCGCTCGCCATGGAGAATCATCCCGAGTCT
TCAACCGTGACACATCTTCATTCATCCATCCAGGCCTCCTCCACACGGCC
ACAGATTTCTCACGCATCGCCTCAAAAGTATCCAGCAACACCGAACCATG
GCTAACAGGCTGGTACAAACTCACCAACAGCTCCAACATCAACCTGGACT
ACACGCCATCCCCAAAGACAATCGTCTATCGCGGCGCAGACGGCACCCAC
ACAGAGAACTATCCCTCCCTGTACAAAGACATCGCAGCCGCCTACGCCAT
GGCCATCTACTGGAAAGTGACCGGCAACACGAGCTACGCCGACGTGGTCG
TGAACATCCTCGATGAATGGAGCTCCACCCTAACCGAAATCTCCGGCACA
ACTGACATGTACCTCGCCGCAGGCATCTACGGGTACGAATTCGCCAATGT
TGCCGAGATCATGCGCACGTATTCCGCATGGCCCAGTGCGAATCTGACCC
GCTTTGCGGATATGATGGTCGATGTGTTCTATCCCCTTAATCATGATTTC
TTGCAGAATCATCATGGCGCGGCTGTTGATCATTACTGGGCGAATTGGGA
TTTGTGTAATATCGCCTCGGTTCTGTCCATTGGGGTGTTGACCGATAACG
AAACCATGTTCGATGAGGGGTTGACTTATTTCAAGTCCGGAGCTGGGAAT
GGCCAGATTGAAAAGGCGATCTGGAAGCTGTATCAGGTTGATGGGGAGTC
CTTGGGTCAGGGCCAGGAGGCCGGGCGGGATCAGGGCCACTCGATGTTGG
ATTTCGCCCTGCTTGGCCCTATCGCCCAGACGGCATACAATCAGGGAACG
GACCTGTTTGAATATCTGGATAATCGCATTCTGGCTGGAGCGGAATACGT
CGCCAAATACAACCTCGGCAATGACGTTCCCTACACGACCTACAACAACA
GCGACGACGTCAACCAGACGGTTATCAGCAATTCCAGCCGCGGGGACATC
AGACCCATCTGGGAGCTGCTGTATCACCACTATGGTGTACTCAAGGGACT
GGACGTCACTTACACAAAGGAGTATCGCGATATGGTCGTTGAGGATGGCG
ATGGGGCTGAGGGCGGTGGTGGCGATTATGGAACTACTAGTGGTGGGTAT
GACCAGTTGGGATGGGGGACGCTGATGTATACTCTTGAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042597 | periplasmic space |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016829 | lyase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | SECRETED:SignalP(1-23) |
| DBxref | InterPro:IPR008397 |
| DBxref | InterPro:IPR008929 |
| DBxref | PFAM:PF05426 |
| Product | Alginate lyase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:633068..634399 + |
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