You are here

Home

CAN33_17265-T1, CAN33_17265-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_17265-T1
Unique NameCAN33_17265-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:677747..679444+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_17265-T1 ID=CAN33_17265-T1|Name=CAN33_17265-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1698bp|location=Sequence derived from alignment at NKJJ01000011.1:677747..679444+ (Aspergillus niger FDAARGOS_311)
ATGACGGACGATTACTTCAACCTAGGCTCGTACAGCCGAACCGTAACGAC
CAACTCCCCCGACGCCCAGCTATGGTTTAACCGCGGACTTGTCTGGTCAT
ACTCCTTCAATCACGAAGAAGCGTCCCGTTGTTTCATCAAAGCCAGCAAG
GCCGATGAGAATTGTGCCATGGCGTACTGGGGCCTGGCCTATGCCCGTGG
ACCAAACTACAACAAGGCCTGGATTCGTTTCGACCTAGCGGATCTGGCCA
CCACTATTACGGAAATGAGACCCGTGCTCCAACGCGCCCAGGCCCTGGCA
GCACAGGGGGCAAGTCCGGCCGAAAGGGCTGTAATTGAGGCCTTGAAGGC
TCGATTTCCCAAAGATGATGATGAAACGAAGCCAGAAAACCTGGATCTTC
ATGCGTTGGATCGTGCCTATGCAGAAGCCATGCGACCTGTCTACGAAGCT
TATCCGGAGGACCCTGATATTGTGGCTCTTTTTGTCGAGGCGCTCATGTG
CATATCCCCACGGGCTCTGTGGAATCTTGACACTGGTGAACCCTGTGGTC
CGCATACCACTGAGGCTCGTCGGGTTCTTGAGAAGGCCATGACCTCCCTT
CCTGGGGGCAGTAGCAACCCTGCATACTGCCATCTCTATATCCATCTCAT
GGAGATGGCGCCGTATCCGGAGATTGCTTTACCAGCTGCGGATCGCCTTC
TGCGACTCGTGCCGGATGGTTCGCATATGCTGCATATGCCTAGCCATATT
TACGTCGCCTGTGGTGACTACCGAGCGGTCATTGATTCGAACAACCAGGC
CATGGTTGTCGACGACAAGTACTTTGCCAGGGAGCCGGGCACCATCTTAT
ATATTATGTACCGAGCGCACAACATCTACGTGAAGGTCTATGGCGCAGTC
ATCTCCGGAAACTTTGCAGAGGCAATCTCCGGTATGAAGCGCCTTCAGGA
GATCCTCACTCCCGAGCTTTTGTCTATAACCAGCCCTCCGATCGCCAATT
GGGCAGAAGGGTTTCTGGGCGCCATAGCCCATGTGTTGATCCGCTTTGGA
CGGTGGGATGATATATTAGACTTAAAGCTCCCCGAGGACAAGGAGCTATT
TGCCTCTACGACAGCGATGATATACTATGCCCGCGGCATTGCTTTGGCGG
TATTGAATCGAGTGGACGAGGCCCAAGAAGAAAGGAAGAAATTTGAGGCT
GCCCGCGAAAAGGTTCCACCATCTCGCTTGAACAGTCTGCCCGTTCGCGA
GGTGGACGTCCTTGAGATCGGGTCGGCTATGCTGAAAGGAGAGATCGAGT
ATCGCCAGGGCAACTTTGAGGAGGCTTTCAATCACTTGAGACAAGCGACA
AAGCTGGAGGATAACCTGGTCTATGCGGATCCTCCGCCGTGGATGCAGCC
TGCGCGACATGCCCTGGGGGCTTTGCTTCTTGAACAGGGTCATGTTAGCG
AAGCACAGCATGTGTATGAAGAAGATCTGGGATTGAGTGAGACCCTCCCA
CGTCGGAAGGCAAGACTGAATAATGTCTGGAGTTTGCATGGCTTGTATGA
GTGTCAGGTCCGGCAAGGGTTGCACGACAAGGCCCGGTATATCCGTGCTC
AACGCGACGTTGCGCTGGCTTCGGCGGATGTTCCCATCAATGCTTCGTGT
TTCTGTCGTCTTTCGGCGGTTGAGTCGACCAGCGCTTGTTGTAAGTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000011.1:677747..679444+

>CAN33_17265-T1 ID=CAN33_17265-T1|Name=CAN33_17265-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1698bp|location=Sequence derived from alignment at NKJJ01000011.1:677747..679444+ (Aspergillus niger FDAARGOS_311)
ATGACGGACGATTACTTCAACCTAGGCTCGTACAGCCGAACCGTAACGAC
CAACTCCCCCGACGCCCAGCTATGGTTTAACCGCGGACTTGTCTGGTCAT
ACTCCTTCAATCACGAAGAAGCGTCCCGTTGTTTCATCAAAGCCAGCAAG
GCCGATGAGAATTGTGCCATGGCGTACTGGGGCCTGGCCTATGCCCGTGG
ACCAAACTACAACAAGGCCTGGATTCGTTTCGACCTAGCGGATCTGGCCA
CCACTATTACGGAAATGAGACCCGTGCTCCAACGCGCCCAGGCCCTGGCA
GCACAGGGGGCAAGTCCGGCCGAAAGGGCTGTAATTGAGGCCTTGAAGGC
TCGATTTCCCAAAGATGATGATGAAACGAAGCCAGAAAACCTGGATCTTC
ATGCGTTGGATCGTGCCTATGCAGAAGCCATGCGACCTGTCTACGAAGCT
TATCCGGAGGACCCTGATATTGTGGCTCTTTTTGTCGAGGCGCTCATGTG
CATATCCCCACGGGCTCTGTGGAATCTTGACACTGGTGAACCCTGTGGTC
CGCATACCACTGAGGCTCGTCGGGTTCTTGAGAAGGCCATGACCTCCCTT
CCTGGGGGCAGTAGCAACCCTGCATACTGCCATCTCTATATCCATCTCAT
GGAGATGGCGCCGTATCCGGAGATTGCTTTACCAGCTGCGGATCGCCTTC
TGCGACTCGTGCCGGATGGTTCGCATATGCTGCATATGCCTAGCCATATT
TACGTCGCCTGTGGTGACTACCGAGCGGTCATTGATTCGAACAACCAGGC
CATGGTTGTCGACGACAAGTACTTTGCCAGGGAGCCGGGCACCATCTTAT
ATATTATGTACCGAGCGCACAACATCTACGTGAAGGTCTATGGCGCAGTC
ATCTCCGGAAACTTTGCAGAGGCAATCTCCGGTATGAAGCGCCTTCAGGA
GATCCTCACTCCCGAGCTTTTGTCTATAACCAGCCCTCCGATCGCCAATT
GGGCAGAAGGGTTTCTGGGCGCCATAGCCCATGTGTTGATCCGCTTTGGA
CGGTGGGATGATATATTAGACTTAAAGCTCCCCGAGGACAAGGAGCTATT
TGCCTCTACGACAGCGATGATATACTATGCCCGCGGCATTGCTTTGGCGG
TATTGAATCGAGTGGACGAGGCCCAAGAAGAAAGGAAGAAATTTGAGGCT
GCCCGCGAAAAGGTTCCACCATCTCGCTTGAACAGTCTGCCCGTTCGCGA
GGTGGACGTCCTTGAGATCGGGTCGGCTATGCTGAAAGGAGAGATCGAGT
ATCGCCAGGGCAACTTTGAGGAGGCTTTCAATCACTTGAGACAAGCGACA
AAGCTGGAGGATAACCTGGTCTATGCGGATCCTCCGCCGTGGATGCAGCC
TGCGCGACATGCCCTGGGGGCTTTGCTTCTTGAACAGGGTCATGTTAGCG
AAGCACAGCATGTGTATGAAGAAGATCTGGGATTGAGTGAGACCCTCCCA
CGTCGGAAGGCAAGACTGAATAATGTCTGGAGTTTGCATGGCTTGTATGA
GTGTCAGGTCCGGCAAGGGTTGCACGACAAGGCCCGGTATATCCGTGCTC
AACGCGACGTTGCGCTGGCTTCGGCGGATGTTCCCATCAATGCTTCGTGT
TTCTGTCGTCTTTCGGCGGTTGAGTCGACCAGCGCTTGTTGTAAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_17265CAN33_17265Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17265-T1.exon1CAN33_17265-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17265-T1.cdsCAN33_17265-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17265-T1CAN33_17265-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR013026
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR019734
ProductTetratricopeptide repeat family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:677747..679444 +
Powered by Drupal