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CAN33_17285-T1, CAN33_17285-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_17285-T1
Unique NameCAN33_17285-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:698121..699836+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_17285-T1 ID=CAN33_17285-T1|Name=CAN33_17285-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1716bp|location=Sequence derived from alignment at NKJJ01000011.1:698121..699836+ (Aspergillus niger FDAARGOS_311)
ATGTCGGCCCTGCGGCACGGGCTTGGGGTCCTCTATCTTGCTAGCTGGCT
GGGGTCGTCGCTGGCTGCCAGCACCGAGCAATGGAAGTCCCGGTCAATCT
ATCAGACCATGACGGATCGGTTCGCGCGCACTGATGGCTCAACCACCTCC
CCCTGCAACACCACGGAGGGTCTGTACTGTGGTGGTACCTGGCGCGGCAT
GATCAACCATCTGGATTACATCCAGGGGATGGGCTTTGATGCCGTCATGA
TCTCCCCTATCATCGAGAACGTCGAAGGTCGCGTGGAGTACGGAGAAGCC
TATCACGGCTATTGGCCCGTGGATCTGTACTCCCTCAACTCGCACTTTGG
AACCCACCAGGATCTACTGGACCTGAGTGATGCCCTGCATGCTCGCGACA
TGTATCTGATGATGGACACGGTCATCAACAACATGGCCTACATCACCAAT
GGCTCCGACCCCGCCACCCACATCGACTACTCAACCCTGACCCCCTTCAA
TAGCTCGTCTTACTACCATCCCTACTGTAAGATCACCGACTGGAATAACT
TCACCAATGCCCAGCTGTGCCAAACCGGTGACAACATCGTGGCCTTGCCC
GATCTGTATACCGAGCATGCCGAGGTGCAAGAAACCCTGAGCAACTGGGC
CAAGGAAGTCATCTCCACCTATTCCATCGACGGCCTCCGCATCGATGCCG
CAAAACATGTGAACCCCGGCTTCCTGAAGAATTTCGGCGATGCGCTTGAT
ATCTTCATGACCGGCGAAGTGCTGCAGCAAGAGGTCAGCACAATCTGCGA
TTATCAGAACAACTACATCGGCAGTCTCCCGAATTACCCCGTCTACTACG
CCATGTTGAAGGCCTTTACCTTGGGCAACACCAGCGCCCTGGCCACTCAG
GTCCAGTCGATGAAGAATTCCTGTAATGATGTGACCGCCTTGTCGTCATT
CTCCGAAAACCACGATGTCGCGCGATTTGCCAGCATGACCCATGACATGG
CTGTATGAACTCTGCTTGACTTCACAGACCCCTTTCCTAGCTAACATTCT
CACTACTAGCTCGCGAAGAATATTCTCACATTCACTCTTCTCTTCGACGG
TGTTCCCATGATCTATCAAGGTCAAGAGCAGCATCTCGACGGCCCCGGCA
GTCCGGAAAACCGAGAAGCGATATGGCTCTCTGAGTACAACACCGACGCC
GAGCTCTACAAGTTGATCGGCAAGTTGAACGCCATCCGGAAGCACGCCTA
CCGACTCGACAATCACTACCCCGATGTCGAGACGTACCCCATCTTCGAAG
GTGGGAGTGAACTGGGATTCCGCAAGGGAATCGAAGGCCGACAGGTGGTC
ATGCTTCTGTCCACGCAAGGCACGAACAGCAGCGCTTACAACCTCTCGAT
GCCGGTGAGTTTCACGGGTGGCACAGTAGTGACCGAGATTCTGAACTGCG
TCAACTACACGGTCAACGCCCAGAGCGAACTCGTGGTTCCGATGGATAAA
GGAGAGCCGCGCGTGTTCTTCCCGGCGGATCTGATGCCCGGCAGTGGGCT
GTGCGGACTTCCTGTCGCGAATGTCACCTATGCTGCCTTGAGGACGCAAG
GTGCAGCGGCGGCGGAGGCTGCCTTGTCGCTAGGTATCAAGACTGATGCA
GCTTCTAGTGCTTTGCTTTCTCTGGGGCTGTCTGTGGTGGCGGGTCTGAT
TGTGGGGATGTGGTAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:698121..699836+

>CAN33_17285-T1 ID=CAN33_17285-T1|Name=CAN33_17285-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3318bp|location=Sequence derived from alignment at NKJJ01000011.1:698121..699836+ (Aspergillus niger FDAARGOS_311)
ATGTCGGCCCTGCGGCACGGGCTTGGGGTCCTCTATCTTGCTAGCTGGCT
GGGGTCGTCGCTGGCTGCCAGCACCGAGCAATGGAAGTCCCGGTCAATCT
ATCAGACCATGACGGATCGGTTCGCGCGCACTGATGGCTCAACCACCTCC
CCCTGCAACACCACGGAGGGTCTGTACTGTGGTGGTACCTGGCGCGGCAT
GATCAACCATCTGGATTACATCCAGGGGATGGGCTTTGATGCCGTCATGA
TCTCCCCTATCATCGAGAACGTCGAAGGTCGCGTGGAGTACGGAGAAGCC
TATCACGGCTATTGGCCCGTGGATCTGTACTCCCTCAACTCGCACTTTGG
AACCCACCAGGATCTACTGGACCTGAGTGATGCCCTGCATGCTCGCGACA
TGTATCTGATGATGGACACGGTCATCAACAACATGGCCTACATCACCAAT
GGCTCCGACCCCGCCACCCACATCGACTACTCAACCCTGACCCCCTTCAA
TAGCTCGTCTTACTACCATCCCTACTGTAAGATCACCGACTGGAATAACT
TCACCAATGCCCAGCTGTGCCAAACCGGTGACAACATCGTGGCCTTGCCC
GATCTGTATACCGAGCATGCCGAGGTGCAAGAAACCCTGAGCAACTGGGC
CAAGGAAGTCATCTCCACCTATTCCATCGACGGCCTCCGCATCGATGCCG
CAAAACATGTGAACCCCGGCTTCCTGAAGAATTTCGGCGATGCGCTTGAT
ATCTTCATGACCGGCGAAGTGCTGCAGCAAGAGGTCAGCACAATCTGCGA
TTATCAGAACAACTACATCGGCAGTCTCCCGAATTACCCCGTCTACTACG
CCATGTTGAAGGCCTTTACCTTGGGCAACACCAGCGCCCTGGCCACTCAG
GTCCAGTCGATGAAGAATTCCTGTAATGATGTGACCGCCTTGTCGTCATT
CTCCGAAAACCACGATGTCGCGCGATTTGCCAGCATGACCCATGACATGG
CTCTCGCGAAGAATATTCTCACATTCACTCTTCTCTTCGACGGTGTTCCC
ATGATCTATCAAGGTCAAGAGCAGCATCTCGACGGCCCCGGCAGTCCGGA
AAACCGAGAAGCGATATGGCTCTCTGAGTACAACACCGACGCCGAGCTCT
ACAAGTTGATCGGCAAGTTGAACGCCATCCGGAAGCACGCCTACCGACTC
GACAATCACTACCCCGATGTCGAGACGTACCCCATCTTCGAAGGTGGGAG
TGAACTGGGATTCCGCAAGGGAATCGAAGGCCGACAGGTGGTCATGCTTC
TGTCCACGCAAGGCACGAACAGCAGCGCTTACAACCTCTCGATGCCGGTG
AGTTTCACGGGTGGCACAGTAGTGACCGAGATTCTGAACTGCGTCAACTA
CACGGTCAACGCCCAGAGCGAACTCGTGGTTCCGATGGATAAAGGAGAGC
CGCGCGTGTTCTTCCCGGCGGATCTGATGCCCGGCAGTGGGCTGTGCGGA
CTTCCTGTCGCGAATGTCACCTATGCTGCCTTGAGGACGCAAGGTGCAGC
GGCGGCGGAGGCTGCCTTGTCGCTAGGTATCAAGACTGATGCAGCTTCTA
GTGCTTTGCTTTCTCTGGGGCTGTCTGTGGTGGCGGGTCTGATTGTGGGG
ATGTGGTAAATGTCGGCCCTGCGGCACGGGCTTGGGGTCCTCTATCTTGC
TAGCTGGCTGGGGTCGTCGCTGGCTGCCAGCACCGAGCAATGGAAGTCCC
GGTCAATCTATCAGACCATGACGGATCGGTTCGCGCGCACTGATGGCTCA
ACCACCTCCCCCTGCAACACCACGGAGGGTCTGTACTGTGGTGGTACCTG
GCGCGGCATGATCAACCATCTGGATTACATCCAGGGGATGGGCTTTGATG
CCGTCATGATCTCCCCTATCATCGAGAACGTCGAAGGTCGCGTGGAGTAC
GGAGAAGCCTATCACGGCTATTGGCCCGTGGATCTGTACTCCCTCAACTC
GCACTTTGGAACCCACCAGGATCTACTGGACCTGAGTGATGCCCTGCATG
CTCGCGACATGTATCTGATGATGGACACGGTCATCAACAACATGGCCTAC
ATCACCAATGGCTCCGACCCCGCCACCCACATCGACTACTCAACCCTGAC
CCCCTTCAATAGCTCGTCTTACTACCATCCCTACTGTAAGATCACCGACT
GGAATAACTTCACCAATGCCCAGCTGTGCCAAACCGGTGACAACATCGTG
GCCTTGCCCGATCTGTATACCGAGCATGCCGAGGTGCAAGAAACCCTGAG
CAACTGGGCCAAGGAAGTCATCTCCACCTATTCCATCGACGGCCTCCGCA
TCGATGCCGCAAAACATGTGAACCCCGGCTTCCTGAAGAATTTCGGCGAT
GCGCTTGATATCTTCATGACCGGCGAAGTGCTGCAGCAAGAGGTCAGCAC
AATCTGCGATTATCAGAACAACTACATCGGCAGTCTCCCGAATTACCCCG
TCTACTACGCCATGTTGAAGGCCTTTACCTTGGGCAACACCAGCGCCCTG
GCCACTCAGGTCCAGTCGATGAAGAATTCCTGTAATGATGTGACCGCCTT
GTCGTCATTCTCCGAAAACCACGATGTCGCGCGATTTGCCAGCATGACCC
ATGACATGGCTCTCGCGAAGAATATTCTCACATTCACTCTTCTCTTCGAC
GGTGTTCCCATGATCTATCAAGGTCAAGAGCAGCATCTCGACGGCCCCGG
CAGTCCGGAAAACCGAGAAGCGATATGGCTCTCTGAGTACAACACCGACG
CCGAGCTCTACAAGTTGATCGGCAAGTTGAACGCCATCCGGAAGCACGCC
TACCGACTCGACAATCACTACCCCGATGTCGAGACGTACCCCATCTTCGA
AGGTGGGAGTGAACTGGGATTCCGCAAGGGAATCGAAGGCCGACAGGTGG
TCATGCTTCTGTCCACGCAAGGCACGAACAGCAGCGCTTACAACCTCTCG
ATGCCGGTGAGTTTCACGGGTGGCACAGTAGTGACCGAGATTCTGAACTG
CGTCAACTACACGGTCAACGCCCAGAGCGAACTCGTGGTTCCGATGGATA
AAGGAGAGCCGCGCGTGTTCTTCCCGGCGGATCTGATGCCCGGCAGTGGG
CTGTGCGGACTTCCTGTCGCGAATGTCACCTATGCTGCCTTGAGGACGCA
AGGTGCAGCGGCGGCGGAGGCTGCCTTGTCGCTAGGTATCAAGACTGATG
CAGCTTCTAGTGCTTTGCTTTCTCTGGGGCTGTCTGTGGTGGCGGGTCTG
ATTGTGGGGATGTGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016052carbohydrate catabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004556alpha-amylase activity
GO:0005509calcium ion binding
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_17285CAN33_17285Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17285-T1.exon1CAN33_17285-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_17285-T1.exon2CAN33_17285-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17285-T1.cdsCAN33_17285-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17285-T1CAN33_17285-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-22)
NoteCAZy:GH13_27
NoteCAZy:GH13_15
NoteCAZy:GH13_7
NoteCAZy:GH13_19
NoteCAZy:GH13_20
NoteCAZy:GH13_36
NoteCAZy:GH13_2
NoteCAZy:GH13
NoteCAZy:GH13_1
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR013780
DBxrefInterPro:IPR013777
DBxrefInterPro:IPR015340
DBxrefInterPro:IPR006047
DBxrefPFAM:PF09260
DBxrefPFAM:PF00128
ProductAlpha amylase catalytic domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:698121..699836 +
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