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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:740284..742002- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_17345-T1 ID=CAN33_17345-T1|Name=CAN33_17345-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1719bp|location=Sequence derived from alignment at NKJJ01000011.1:740284..742002- (Aspergillus niger FDAARGOS_311)
ATGATGAAGCGCAGCGCGCTCCTTGCCTCTTTCCTTCCTCTCGCCCTGGG
GTGCGACAGCGCTGAGACTCACTCCTGTGCCTCTGCCTTTTCCGTCTCCT
CTGCGGCCGCCGCTAGCTTCTGCGCCACCTTCACGGCGAGCACCGTGACT
GCCACGACTGGCGTGCCGGATGTCTTCCTTTCCAACTGTGACTACAAGAC
CAAGCACCTCTCCAGTGCCTGCAGCTGCCTGGGCACCGCCGATGGATCTG
CTCCTGCTTCCACCCCGGCTGCCCCGGCAGTCTCCAGCAGCAGCAAGGTA
GTGAGTTTACCATTTAGATGCATCATCACGCTTTGATTACTGATTCAGTC
TAGGGCAAGGCACCTGCTGTTGCAGCCACTCGCACCTCGGCGATCCCGAC
CACTTTCCACACCACTGCCGTTCGTGTGCCCCTGTCCACCTCGGCAGCGG
CGGCTGTGACCTCCCAGGCTGTCCTCCCGGCGCAGAGCTCCGTGGCAGGC
AACGGAGGCACTACCTGCACAGTGACTGAGTACGCTTCGATCTCCTCTGC
CGTCGCATCCTGCTCCAACATCCTCCTGTCCAACATCAACGCCCCTGCAT
CGAGCACCATCGATCTCACGGGTCTGCAGACCGGTGCGGCTGTCATCTTT
GCTGGTGAAACCGTAAGTCATATCCTTCCTATATTAGGGCCAACCGCCAT
ACTAACGGAGAGTCCGACAGACCTTCGGTGACACCTACGACAGCGACTTC
GACCCCATTGTCATCTCCGGTACCGACGTGACCATCACCGGTGAGGAGGG
ACATGTCATCAACGGTAACGGTGAAGCCTACTGGGACGGCGAGGGATCCA
ACGGCGGACAGGACAAGTACGAGCCTACCACCACAGCCCTTTCATGAAGA
ACCCTACTCATAGCTCCTACCAGGCCCGACCACTTCATTGTCGTCAAGGA
CATGTACAACTCCAAGATCGAGAACCTCAACATCCTGAACTGGCCCGTCC
ACTGCTTCGAGATCGAGAACACCGAGTACCTGACCATCTCCGGCCTGATC
CTCAACAACACCGCCGGTGACGCCGCCAACAGCAAGAGTGACGGCGACCC
GGCCGCCCACAACACCGACGGCTTCGACATCAAGCAGAGCGACTTCCTGA
CCCTCTCCAACTCCTGGGTGCACAACCAGGACGACTGTGTTGCCGTTACC
AGCGGTAGCTCGATCGTCGTCGACAACCTCTACTGCTACGGTGGTCACGG
TCTCTCCATCGGCTCCATCGGCGGCAAGAGCAACAACACCGTCGACGGCG
TCACCTTCTCCAACTCCCAGGTCATTAACAGCGAGAACGGCTGCCGCATC
AAGTCTAATGCTGATACCACTGGCGAGGTTAGTCCATCCTATCTTAACCA
TCAACATCTTATTATTCTAACCACCGAGCAAATACAGGTCTACAACGTCA
AGTACGAAAACATCACTCTGTCCGGCATCAGCGACTACGGCATCGACATC
CAGCAGGACTACGAGAACGGTGGTGCTACCGGTGACCCGACCAACGGCGT
CAAGATCGAGAACATCTCTTTCGTCAATGTCAAGGGTACTATGAGCGACG
GCAAGGATTACTACATCCTCTGTGGTGATGGCAGCTGCTCTAACTTTGTC
TTCACTGATGTCGACATCACCGGTGGTAGCGATGATAGCTGCAACTACCC
CTCTTCGGGATGCCCTTAA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:740284..742002- >CAN33_17345-T1 ID=CAN33_17345-T1|Name=CAN33_17345-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=8406bp|location=Sequence derived from alignment at NKJJ01000011.1:740284..742002- (Aspergillus niger FDAARGOS_311)
GTCTACAACGTCAAGTACGAAAACATCACTCTGTCCGGCATCAGCGACTA
CGGCATCGACATCCAGCAGGACTACGAGAACGGTGGTGCTACCGGTGACC
CGACCAACGGCGTCAAGATCGAGAACATCTCTTTCGTCAATGTCAAGGGT
ACTATGAGCGACGGCAAGGATTACTACATCCTCTGTGGTGATGGCAGCTG
CTCTAACTTTGTCTTCACTGATGTCGACATCACCGGTGGTAGCGATGATA
GCTGCAACTACCCCTCTTCGGGATGCCCTTAAGCCCGACCACTTCATTGT
CGTCAAGGACATGTACAACTCCAAGATCGAGAACCTCAACATCCTGAACT
GGCCCGTCCACTGCTTCGAGATCGAGAACACCGAGTACCTGACCATCTCC
GGCCTGATCCTCAACAACACCGCCGGTGACGCCGCCAACAGCAAGAGTGA
CGGCGACCCGGCCGCCCACAACACCGACGGCTTCGACATCAAGCAGAGCG
ACTTCCTGACCCTCTCCAACTCCTGGGTGCACAACCAGGACGACTGTGTT
GCCGTTACCAGCGGTAGCTCGATCGTCGTCGACAACCTCTACTGCTACGG
TGGTCACGGTCTCTCCATCGGCTCCATCGGCGGCAAGAGCAACAACACCG
TCGACGGCGTCACCTTCTCCAACTCCCAGGTCATTAACAGCGAGAACGGC
TGCCGCATCAAGTCTAATGCTGATACCACTGGCGAGACCTTCGGTGACAC
CTACGACAGCGACTTCGACCCCATTGTCATCTCCGGTACCGACGTGACCA
TCACCGGTGAGGAGGGACATGTCATCAACGGTAACGGTGAAGCCTACTGG
GACGGCGAGGGATCCAACGGCGGACAGGACAAGGCAAGGCACCTGCTGTT
GCAGCCACTCGCACCTCGGCGATCCCGACCACTTTCCACACCACTGCCGT
TCGTGTGCCCCTGTCCACCTCGGCAGCGGCGGCTGTGACCTCCCAGGCTG
TCCTCCCGGCGCAGAGCTCCGTGGCAGGCAACGGAGGCACTACCTGCACA
GTGACTGAGTACGCTTCGATCTCCTCTGCCGTCGCATCCTGCTCCAACAT
CCTCCTGTCCAACATCAACGCCCCTGCATCGAGCACCATCGATCTCACGG
GTCTGCAGACCGGTGCGGCTGTCATCTTTGCTGGTGAAACCCACCGTGAC
TGCCACGACTGGCGTGCCGGATGTCTTCCTTTCCAACTGTGACTACAAGA
CCAAGCACCTCTCCAGTGCCTGCAGCTGCCTGGGCACCGCCGATGGATCT
GCTCCTGCTTCCACCCCGGCTGCCCCGGCAGTCTCCAGCAGCAGCAAGGT
AATGATGAAGCGCAGCGCGCTCCTTGCCTCTTTCCTTCCTCTCGCCCTGG
GGTCTACAACGTCAAGTACGAAAACATCACTCTGTCCGGCATCAGCGACT
ACGGCATCGACATCCAGCAGGACTACGAGAACGGTGGTGCTACCGGTGAC
CCGACCAACGGCGTCAAGATCGAGAACATCTCTTTCGTCAATGTCAAGGG
TACTATGAGCGACGGCAAGGATTACTACATCCTCTGTGGTGATGGCAGCT
GCTCTAACTTTGTCTTCACTGATGTCGACATCACCGGTGGTAGCGATGAT
AGCTGCAACTACCCCTCTTCGGGATGCCCTTAAGCCCGACCACTTCATTG
TCGTCAAGGACATGTACAACTCCAAGATCGAGAACCTCAACATCCTGAAC
TGGCCCGTCCACTGCTTCGAGATCGAGAACACCGAGTACCTGACCATCTC
CGGCCTGATCCTCAACAACACCGCCGGTGACGCCGCCAACAGCAAGAGTG
ACGGCGACCCGGCCGCCCACAACACCGACGGCTTCGACATCAAGCAGAGC
GACTTCCTGACCCTCTCCAACTCCTGGGTGCACAACCAGGACGACTGTGT
TGCCGTTACCAGCGGTAGCTCGATCGTCGTCGACAACCTCTACTGCTACG
GTGGTCACGGTCTCTCCATCGGCTCCATCGGCGGCAAGAGCAACAACACC
GTCGACGGCGTCACCTTCTCCAACTCCCAGGTCATTAACAGCGAGAACGG
CTGCCGCATCAAGTCTAATGCTGATACCACTGGCGAGACCTTCGGTGACA
CCTACGACAGCGACTTCGACCCCATTGTCATCTCCGGTACCGACGTGACC
ATCACCGGTGAGGAGGGACATGTCATCAACGGTAACGGTGAAGCCTACTG
GGACGGCGAGGGATCCAACGGCGGACAGGACAAGGCAAGGCACCTGCTGT
TGCAGCCACTCGCACCTCGGCGATCCCGACCACTTTCCACACCACTGCCG
TTCGTGTGCCCCTGTCCACCTCGGCAGCGGCGGCTGTGACCTCCCAGGCT
GTCCTCCCGGCGCAGAGCTCCGTGGCAGGCAACGGAGGCACTACCTGCAC
AGTGACTGAGTACGCTTCGATCTCCTCTGCCGTCGCATCCTGCTCCAACA
TCCTCCTGTCCAACATCAACGCCCCTGCATCGAGCACCATCGATCTCACG
GGTCTGCAGACCGGTGCGGCTGTCATCTTTGCTGGTGAAACCCACCGTGA
CTGCCACGACTGGCGTGCCGGATGTCTTCCTTTCCAACTGTGACTACAAG
ACCAAGCACCTCTCCAGTGCCTGCAGCTGCCTGGGCACCGCCGATGGATC
TGCTCCTGCTTCCACCCCGGCTGCCCCGGCAGTCTCCAGCAGCAGCAAGG
TAATGATGAAGCGCAGCGCGCTCCTTGCCTCTTTCCTTCCTCTCGCCCTG
GGGTCTACAACGTCAAGTACGAAAACATCACTCTGTCCGGCATCAGCGAC
TACGGCATCGACATCCAGCAGGACTACGAGAACGGTGGTGCTACCGGTGA
CCCGACCAACGGCGTCAAGATCGAGAACATCTCTTTCGTCAATGTCAAGG
GTACTATGAGCGACGGCAAGGATTACTACATCCTCTGTGGTGATGGCAGC
TGCTCTAACTTTGTCTTCACTGATGTCGACATCACCGGTGGTAGCGATGA
TAGCTGCAACTACCCCTCTTCGGGATGCCCTTAAGCCCGACCACTTCATT
GTCGTCAAGGACATGTACAACTCCAAGATCGAGAACCTCAACATCCTGAA
CTGGCCCGTCCACTGCTTCGAGATCGAGAACACCGAGTACCTGACCATCT
CCGGCCTGATCCTCAACAACACCGCCGGTGACGCCGCCAACAGCAAGAGT
GACGGCGACCCGGCCGCCCACAACACCGACGGCTTCGACATCAAGCAGAG
CGACTTCCTGACCCTCTCCAACTCCTGGGTGCACAACCAGGACGACTGTG
TTGCCGTTACCAGCGGTAGCTCGATCGTCGTCGACAACCTCTACTGCTAC
GGTGGTCACGGTCTCTCCATCGGCTCCATCGGCGGCAAGAGCAACAACAC
CGTCGACGGCGTCACCTTCTCCAACTCCCAGGTCATTAACAGCGAGAACG
GCTGCCGCATCAAGTCTAATGCTGATACCACTGGCGAGACCTTCGGTGAC
ACCTACGACAGCGACTTCGACCCCATTGTCATCTCCGGTACCGACGTGAC
CATCACCGGTGAGGAGGGACATGTCATCAACGGTAACGGTGAAGCCTACT
GGGACGGCGAGGGATCCAACGGCGGACAGGACAAGGCAAGGCACCTGCTG
TTGCAGCCACTCGCACCTCGGCGATCCCGACCACTTTCCACACCACTGCC
GTTCGTGTGCCCCTGTCCACCTCGGCAGCGGCGGCTGTGACCTCCCAGGC
TGTCCTCCCGGCGCAGAGCTCCGTGGCAGGCAACGGAGGCACTACCTGCA
CAGTGACTGAGTACGCTTCGATCTCCTCTGCCGTCGCATCCTGCTCCAAC
ATCCTCCTGTCCAACATCAACGCCCCTGCATCGAGCACCATCGATCTCAC
GGGTCTGCAGACCGGTGCGGCTGTCATCTTTGCTGGTGAAACCCACCGTG
ACTGCCACGACTGGCGTGCCGGATGTCTTCCTTTCCAACTGTGACTACAA
GACCAAGCACCTCTCCAGTGCCTGCAGCTGCCTGGGCACCGCCGATGGAT
CTGCTCCTGCTTCCACCCCGGCTGCCCCGGCAGTCTCCAGCAGCAGCAAG
GTAATGATGAAGCGCAGCGCGCTCCTTGCCTCTTTCCTTCCTCTCGCCCT
GGGGTCTACAACGTCAAGTACGAAAACATCACTCTGTCCGGCATCAGCGA
CTACGGCATCGACATCCAGCAGGACTACGAGAACGGTGGTGCTACCGGTG
ACCCGACCAACGGCGTCAAGATCGAGAACATCTCTTTCGTCAATGTCAAG
GGTACTATGAGCGACGGCAAGGATTACTACATCCTCTGTGGTGATGGCAG
CTGCTCTAACTTTGTCTTCACTGATGTCGACATCACCGGTGGTAGCGATG
ATAGCTGCAACTACCCCTCTTCGGGATGCCCTTAAGCCCGACCACTTCAT
TGTCGTCAAGGACATGTACAACTCCAAGATCGAGAACCTCAACATCCTGA
ACTGGCCCGTCCACTGCTTCGAGATCGAGAACACCGAGTACCTGACCATC
TCCGGCCTGATCCTCAACAACACCGCCGGTGACGCCGCCAACAGCAAGAG
TGACGGCGACCCGGCCGCCCACAACACCGACGGCTTCGACATCAAGCAGA
GCGACTTCCTGACCCTCTCCAACTCCTGGGTGCACAACCAGGACGACTGT
GTTGCCGTTACCAGCGGTAGCTCGATCGTCGTCGACAACCTCTACTGCTA
CGGTGGTCACGGTCTCTCCATCGGCTCCATCGGCGGCAAGAGCAACAACA
CCGTCGACGGCGTCACCTTCTCCAACTCCCAGGTCATTAACAGCGAGAAC
GGCTGCCGCATCAAGTCTAATGCTGATACCACTGGCGAGACCTTCGGTGA
CACCTACGACAGCGACTTCGACCCCATTGTCATCTCCGGTACCGACGTGA
CCATCACCGGTGAGGAGGGACATGTCATCAACGGTAACGGTGAAGCCTAC
TGGGACGGCGAGGGATCCAACGGCGGACAGGACAAGGCAAGGCACCTGCT
GTTGCAGCCACTCGCACCTCGGCGATCCCGACCACTTTCCACACCACTGC
CGTTCGTGTGCCCCTGTCCACCTCGGCAGCGGCGGCTGTGACCTCCCAGG
CTGTCCTCCCGGCGCAGAGCTCCGTGGCAGGCAACGGAGGCACTACCTGC
ACAGTGACTGAGTACGCTTCGATCTCCTCTGCCGTCGCATCCTGCTCCAA
CATCCTCCTGTCCAACATCAACGCCCCTGCATCGAGCACCATCGATCTCA
CGGGTCTGCAGACCGGTGCGGCTGTCATCTTTGCTGGTGAAACCCACCGT
GACTGCCACGACTGGCGTGCCGGATGTCTTCCTTTCCAACTGTGACTACA
AGACCAAGCACCTCTCCAGTGCCTGCAGCTGCCTGGGCACCGCCGATGGA
TCTGCTCCTGCTTCCACCCCGGCTGCCCCGGCAGTCTCCAGCAGCAGCAA
GGTAATGATGAAGCGCAGCGCGCTCCTTGCCTCTTTCCTTCCTCTCGCCC
TGGGGTCTACAACGTCAAGTACGAAAACATCACTCTGTCCGGCATCAGCG
ACTACGGCATCGACATCCAGCAGGACTACGAGAACGGTGGTGCTACCGGT
GACCCGACCAACGGCGTCAAGATCGAGAACATCTCTTTCGTCAATGTCAA
GGGTACTATGAGCGACGGCAAGGATTACTACATCCTCTGTGGTGATGGCA
GCTGCTCTAACTTTGTCTTCACTGATGTCGACATCACCGGTGGTAGCGAT
GATAGCTGCAACTACCCCTCTTCGGGATGCCCTTAAGCCCGACCACTTCA
TTGTCGTCAAGGACATGTACAACTCCAAGATCGAGAACCTCAACATCCTG
AACTGGCCCGTCCACTGCTTCGAGATCGAGAACACCGAGTACCTGACCAT
CTCCGGCCTGATCCTCAACAACACCGCCGGTGACGCCGCCAACAGCAAGA
GTGACGGCGACCCGGCCGCCCACAACACCGACGGCTTCGACATCAAGCAG
AGCGACTTCCTGACCCTCTCCAACTCCTGGGTGCACAACCAGGACGACTG
TGTTGCCGTTACCAGCGGTAGCTCGATCGTCGTCGACAACCTCTACTGCT
ACGGTGGTCACGGTCTCTCCATCGGCTCCATCGGCGGCAAGAGCAACAAC
ACCGTCGACGGCGTCACCTTCTCCAACTCCCAGGTCATTAACAGCGAGAA
CGGCTGCCGCATCAAGTCTAATGCTGATACCACTGGCGAGACCTTCGGTG
ACACCTACGACAGCGACTTCGACCCCATTGTCATCTCCGGTACCGACGTG
ACCATCACCGGTGAGGAGGGACATGTCATCAACGGTAACGGTGAAGCCTA
CTGGGACGGCGAGGGATCCAACGGCGGACAGGACAAGGCAAGGCACCTGC
TGTTGCAGCCACTCGCACCTCGGCGATCCCGACCACTTTCCACACCACTG
CCGTTCGTGTGCCCCTGTCCACCTCGGCAGCGGCGGCTGTGACCTCCCAG
GCTGTCCTCCCGGCGCAGAGCTCCGTGGCAGGCAACGGAGGCACTACCTG
CACAGTGACTGAGTACGCTTCGATCTCCTCTGCCGTCGCATCCTGCTCCA
ACATCCTCCTGTCCAACATCAACGCCCCTGCATCGAGCACCATCGATCTC
ACGGGTCTGCAGACCGGTGCGGCTGTCATCTTTGCTGGTGAAACCCACCG
TGACTGCCACGACTGGCGTGCCGGATGTCTTCCTTTCCAACTGTGACTAC
AAGACCAAGCACCTCTCCAGTGCCTGCAGCTGCCTGGGCACCGCCGATGG
ATCTGCTCCTGCTTCCACCCCGGCTGCCCCGGCAGTCTCCAGCAGCAGCA
AGGTAATGATGAAGCGCAGCGCGCTCCTTGCCTCTTTCCTTCCTCTCGCC
CTGGGGTCTACAACGTCAAGTACGAAAACATCACTCTGTCCGGCATCAGC
GACTACGGCATCGACATCCAGCAGGACTACGAGAACGGTGGTGCTACCGG
TGACCCGACCAACGGCGTCAAGATCGAGAACATCTCTTTCGTCAATGTCA
AGGGTACTATGAGCGACGGCAAGGATTACTACATCCTCTGTGGTGATGGC
AGCTGCTCTAACTTTGTCTTCACTGATGTCGACATCACCGGTGGTAGCGA
TGATAGCTGCAACTACCCCTCTTCGGGATGCCCTTAAGCCCGACCACTTC
ATTGTCGTCAAGGACATGTACAACTCCAAGATCGAGAACCTCAACATCCT
GAACTGGCCCGTCCACTGCTTCGAGATCGAGAACACCGAGTACCTGACCA
TCTCCGGCCTGATCCTCAACAACACCGCCGGTGACGCCGCCAACAGCAAG
AGTGACGGCGACCCGGCCGCCCACAACACCGACGGCTTCGACATCAAGCA
GAGCGACTTCCTGACCCTCTCCAACTCCTGGGTGCACAACCAGGACGACT
GTGTTGCCGTTACCAGCGGTAGCTCGATCGTCGTCGACAACCTCTACTGC
TACGGTGGTCACGGTCTCTCCATCGGCTCCATCGGCGGCAAGAGCAACAA
CACCGTCGACGGCGTCACCTTCTCCAACTCCCAGGTCATTAACAGCGAGA
ACGGCTGCCGCATCAAGTCTAATGCTGATACCACTGGCGAGACCTTCGGT
GACACCTACGACAGCGACTTCGACCCCATTGTCATCTCCGGTACCGACGT
GACCATCACCGGTGAGGAGGGACATGTCATCAACGGTAACGGTGAAGCCT
ACTGGGACGGCGAGGGATCCAACGGCGGACAGGACAAGGCAAGGCACCTG
CTGTTGCAGCCACTCGCACCTCGGCGATCCCGACCACTTTCCACACCACT
GCCGTTCGTGTGCCCCTGTCCACCTCGGCAGCGGCGGCTGTGACCTCCCA
GGCTGTCCTCCCGGCGCAGAGCTCCGTGGCAGGCAACGGAGGCACTACCT
GCACAGTGACTGAGTACGCTTCGATCTCCTCTGCCGTCGCATCCTGCTCC
AACATCCTCCTGTCCAACATCAACGCCCCTGCATCGAGCACCATCGATCT
CACGGGTCTGCAGACCGGTGCGGCTGTCATCTTTGCTGGTGAAACCCACC
GTGACTGCCACGACTGGCGTGCCGGATGTCTTCCTTTCCAACTGTGACTA
CAAGACCAAGCACCTCTCCAGTGCCTGCAGCTGCCTGGGCACCGCCGATG
GATCTGCTCCTGCTTCCACCCCGGCTGCCCCGGCAGTCTCCAGCAGCAGC
AAGGTAATGATGAAGCGCAGCGCGCTCCTTGCCTCTTTCCTTCCTCTCGC
CCTGGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004650 | polygalacturonase activity |
Vocabulary: Biological Process
| Term | Definition |
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| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-17) |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR000743 |
| DBxref | InterPro:IPR006626 |
| DBxref | PFAM:PF00295 |
| Product | Glycosyl hydrolases family 28 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:740284..742002 - |
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