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CAN33_17425-T1, CAN33_17425-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_17425-T1
Unique NameCAN33_17425-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:787669..788680-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_17425-T1 ID=CAN33_17425-T1|Name=CAN33_17425-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1012bp|location=Sequence derived from alignment at NKJJ01000011.1:787669..788680- (Aspergillus niger FDAARGOS_311)
ATGTCCCCGCCAGCTATCATTGCTCCCTCCATCCTGAGTGCCGACTTCGG
CACCCTGGGCAGCGAATGCTCGACCAAGATTGCCCAAGGATCCGACTGGT
TGCACGTCGACATCATGGACGGCCACTTCGTCCCCAACATGACCTTTGGT
GCCCCCGTCGTGACCAAGATTCGCTCCCATGTTGCCCGTCCCACCGAGCC
CAACGGCAAGGGCACCTTTGACTGCCACATGATGATCCAGGAAGTGCGTC
TGGCCTCTCTTCTTCCTCCTACCACTATTTATATACTCCAATGACTTCTA
TATATCTCAATGACCTCTATGCTAATCCCCATACAGCCCCACAAATGGGT
CAAGGACTTCAAAGATGCCGGCTGTGATCTTTACTGCTTCCACTACGAAG
CCGCCATTTCCTCCACCGCCGCCACCAGTCCCGCCGACAACACCACAACC
ACCAAGACCAGCCCCAAGGACCTGATCCGCTATATCCACGACGAGGGCAT
GCAAGCTGGAATTGCCATCAAGCCCGATACCCCCGTCGACGTGCTCTGGG
ATATCCTGGCGAATGAGAACGAGAAGGAGCGTCCGGATGTGAGTGATTCT
ACATCCCCATCCCCATGCCCCATTCTTCCTTGGGCCCTCAGCACATGTTT
GCGGAGCATACCCCACATAAAATCAAAAGTGGTGCATGGTTAAGGTTTAA
GCTACGGAGCAACAACATGCTAATGCTATCTATCTTGGCGTCTTACAGAT
GGTCCTCGTCATGACCGTTCACCCCGGGTTCGGTGGTCAGAAGTTCATGG
CCTCCGAGCTGCCCAAGGTCAAAGCTCTGCGGGAGAAATACCCCAACCTC
AATATCGAGGTGGATGGTGGCTTGGGACTGGGTACTATTGATCAGGCTGC
TGAGGCTGGCGCCAACGTCATCGTTGCGGGTTCGGCCGTCTTTGGCGCTC
AGAATCCCGCCGACGTCATCGCTAAACTCCGCGAGACTGTCAACAAGTAT
CGCAAGGAGTAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:787669..788680-

>CAN33_17425-T1 ID=CAN33_17425-T1|Name=CAN33_17425-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1800bp|location=Sequence derived from alignment at NKJJ01000011.1:787669..788680- (Aspergillus niger FDAARGOS_311)
ATGGTCCTCGTCATGACCGTTCACCCCGGGTTCGGTGGTCAGAAGTTCAT
GGCCTCCGAGCTGCCCAAGGTCAAAGCTCTGCGGGAGAAATACCCCAACC
TCAATATCGAGGTGGATGGTGGCTTGGGACTGGGTACTATTGATCAGGCT
GCTGAGGCTGGCGCCAACGTCATCGTTGCGGGTTCGGCCGTCTTTGGCGC
TCAGAATCCCGCCGACGTCATCGCTAAACTCCGCGAGACTGTCAACAAGT
ATCGCAAGGAGTAAGGCATGCAAGCTGGAATTGCCATCAAGCCCGATACC
CCCGTCGACGTGCTCTGGGATATCCTGGCGAATGAGAACGAGAAGGAGCG
TCCGGATATGTCCCCGCCAGCTATCATTGCTCCCTCCATCCTGAGTGCCG
ACTTCGGCACCCTGGGCAGCGAATGCTCGACCAAGATTGCCCAAGGATCC
GACTGGTTGCACGTCGACATCATGGACGGCCACTTCGTCCCCAACATGAC
CTTTGGTGCCCCCGTCGTGACCAAGATTCGCTCCCATGTTGCCCGTCCCA
CCGAGCCCAACGGCAAGGGCACCTTTGACTGCCACATGATGATCCAGGAA
ATGGTCCTCGTCATGACCGTTCACCCCGGGTTCGGTGGTCAGAAGTTCAT
GGCCTCCGAGCTGCCCAAGGTCAAAGCTCTGCGGGAGAAATACCCCAACC
TCAATATCGAGGTGGATGGTGGCTTGGGACTGGGTACTATTGATCAGGCT
GCTGAGGCTGGCGCCAACGTCATCGTTGCGGGTTCGGCCGTCTTTGGCGC
TCAGAATCCCGCCGACGTCATCGCTAAACTCCGCGAGACTGTCAACAAGT
ATCGCAAGGAGTAAGGCATGCAAGCTGGAATTGCCATCAAGCCCGATACC
CCCGTCGACGTGCTCTGGGATATCCTGGCGAATGAGAACGAGAAGGAGCG
TCCGGATATGTCCCCGCCAGCTATCATTGCTCCCTCCATCCTGAGTGCCG
ACTTCGGCACCCTGGGCAGCGAATGCTCGACCAAGATTGCCCAAGGATCC
GACTGGTTGCACGTCGACATCATGGACGGCCACTTCGTCCCCAACATGAC
CTTTGGTGCCCCCGTCGTGACCAAGATTCGCTCCCATGTTGCCCGTCCCA
CCGAGCCCAACGGCAAGGGCACCTTTGACTGCCACATGATGATCCAGGAA
ATGGTCCTCGTCATGACCGTTCACCCCGGGTTCGGTGGTCAGAAGTTCAT
GGCCTCCGAGCTGCCCAAGGTCAAAGCTCTGCGGGAGAAATACCCCAACC
TCAATATCGAGGTGGATGGTGGCTTGGGACTGGGTACTATTGATCAGGCT
GCTGAGGCTGGCGCCAACGTCATCGTTGCGGGTTCGGCCGTCTTTGGCGC
TCAGAATCCCGCCGACGTCATCGCTAAACTCCGCGAGACTGTCAACAAGT
ATCGCAAGGAGTAAGGCATGCAAGCTGGAATTGCCATCAAGCCCGATACC
CCCGTCGACGTGCTCTGGGATATCCTGGCGAATGAGAACGAGAAGGAGCG
TCCGGATATGTCCCCGCCAGCTATCATTGCTCCCTCCATCCTGAGTGCCG
ACTTCGGCACCCTGGGCAGCGAATGCTCGACCAAGATTGCCCAAGGATCC
GACTGGTTGCACGTCGACATCATGGACGGCCACTTCGTCCCCAACATGAC
CTTTGGTGCCCCCGTCGTGACCAAGATTCGCTCCCATGTTGCCCGTCCCA
CCGAGCCCAACGGCAAGGGCACCTTTGACTGCCACATGATGATCCAGGAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016857racemase and epimerase activity, acting on carbohydrates and derivatives
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_17425CAN33_17425Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17425-T1CAN33_17425-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17425-T1.cdsCAN33_17425-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17425-T1.exon3CAN33_17425-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_17425-T1.exon2CAN33_17425-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_17425-T1.exon1CAN33_17425-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR011060
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR000056
ProductRibulose-phosphate 3 epimerase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:787669..788680 -
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