You are here

Home

CAN33_17480-T1, CAN33_17480-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_17480-T1
Unique NameCAN33_17480-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:822000..823527-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_17480-T1 ID=CAN33_17480-T1|Name=CAN33_17480-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1528bp|location=Sequence derived from alignment at NKJJ01000011.1:822000..823527- (Aspergillus niger FDAARGOS_311)
ATGTTCTCAGTTTTCCTCCTCTATTTGCAGCTTTTGCTGTTCAAAATTCT
GTACTACATCCGCGGCCATGACAAGAACCTTATCACCAAGTCCGCTGCTT
TTGCTCACTTATCTGAGCCCAACATGAAGCTCGAGGCTCCGGAGTGCGGG
TTGCCCGGATGTAGCCTCCTCGAACATCACACTTATCTCGACCTCGAAAA
AGGAGGAAGATTTCCTCACCTTCGCTGGACGATGCCTCGTTCCGGTGAAG
CCAAAGAGTTTGTGCTGATTTGTGAGGATCCCGACGTCCCTATCCCGTCT
ATGGTTTTTGTCCACGGCCTGTTCTTCGAGATTCCACCTACTTGCTTTGT
CGCATATGATGACGACGTTGACAAGAATCCTAATATGCCTGGCCGCGTCA
CCTTTGCTGGTTGGAGATACGTGCCTAACCTGCTGGGCTCTTCCTACATT
GGTGCCTCGCCTCCTTACGGCCACGGATACCATCGCTACATCTTCACCAT
CGTGGCGCTGAGCGAGCCCCTCGACATTGCTCAGCCTGACAAAGCGACCA
TCTCAGTTATCAAGGAAGCCATGGTTGGCAAAGTGATCGGCTGGGGCGAA
TGGTTGGGCACCTTTCAGCGCCACACGCCTCGCTAACTCGCAAAGCTGCC
CCTTTGCCATGTCTCTTCGGTTTGTCTCTTAATGCGAGTTCTTACTTTCG
ACACGCCTTTGGTTCACGCCTAGGATTGATTACGGACAGCTCGTTGGGAT
GAGATCTGGATAGGATGTGGCGGATGCATTGGCCTTCCTCGGACTGGTCT
TCCTTGGAGTGGTCTTCTCTGAACTGGTCTTGTGACTGGTCCTCGTGTGT
TTTTTCCCTTTCCGATTCTGTTATTGACTTGATTTTGTGTCGCGACTCGT
CGTCGTGTGTTGTTTTTTCCTCCTTCTCTAGTTATGTTCTCGACTTCATG
TTTCTCGTGACTGATCACTCGTATGTTATTTTGTCTTACTTCATATGATG
CTGGTCTTAGTACCAGTTCAATGATCGGATTGAGCTAACGCGTCGAAACC
CAATCTAATTTATCAACTTGCCTGGTCTCACATAGTATATAGGGTACGCC
TTGTCCTCGCCCATCGACCCTCGTCGTCGTCCTTCACGCCCCTGGACGAA
TCAGTATTAGCCACTACCGCGAGCCTAGAACGTATAAACGACCCACCAGA
GCTATCCTCAACCTGCTTCATAAACACCGCGAACCTCTGCATGGTGGCCT
CAACCGACGACTCACACGCCCGTAGCGTTGCGGGGCCCGAACATCGTCCC
CCTCCAACCGCCTCTTTCCCCAACGACACGAATATCTTTTGCAGTGTTTC
CAACACTTCCAAGATTTTCATTAAGTTCCTCCCCAGTAGCGTTCTTACCA
TCATCAGCGATTCCTTTTCGTCCAGCTCTATCTGTCCCAACACTGTCTTA
CTCCTCATACAGATGAACTGCGACAACGGCTCCTCGAACGCCAACATTGC
CGGATCGAACAGCATGTTCCCCTCGTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000011.1:822000..823527-

>CAN33_17480-T1 ID=CAN33_17480-T1|Name=CAN33_17480-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2076bp|location=Sequence derived from alignment at NKJJ01000011.1:822000..823527- (Aspergillus niger FDAARGOS_311)
GGTACGCCTTGTCCTCGCCCATCGACCCTCGTCGTCGTCCTTCACGCCCC
TGGACGAATCAGTATTAGCCACTACCGCGAGCCTAGAACGTATAAACGAC
CCACCAGAGCTATCCTCAACCTGCTTCATAAACACCGCGAACCTCTGCAT
GGTGGCCTCAACCGACGACTCACACGCCCGTAGCGTTGCGGGGCCCGAAC
ATCGTCCCCCTCCAACCGCCTCTTTCCCCAACGACACGAATATCTTTTGC
AGTGTTTCCAACACTTCCAAGATTTTCATTAAGTTCCTCCCCAGTAGCGT
TCTTACCATCATCAGCGATTCCTTTTCGTCCAGCTCTATCTGTCCCAACA
CTGTCTTACTCCTCATACAGATGAACTGCGACAACGGCTCCTCGAACGCC
AACATTGCCGGATCGAACAGCATGTTCCCCTCGTAAATGTTCTCAGTTTT
CCTCCTCTATTTGCAGCTTTTGCTGTTCAAAATTCTGTACTACATCCGCG
GCCATGACAAGAACCTTATCACCAAGTCCGCTGCTTTTGCTCACTTATCT
GAGCCCAACATGAAGCTCGAGGCTCCGGAGTGCGGGTTGCCCGGATGTAG
CCTCCTCGAACATCACACTTATCTCGACCTCGAAAAAGGAGGAAGATTTC
CTCACCTTCGCTGGACGATGCCTCGTTCCGGTGAAGCCAAAGAGTTTGTG
CTGATTTGTGAGGATCCCGACGTCCCTATCCCGTCTATGGTTTTTGTCCA
CGGCCTGTTCTTCGAGATTCCACCTACTTGCTTTGTCGCATATGATGACG
ACGTTGACAAGAATCCTAATATGCCTGGCCGCGTCACCTTTGCTGGTTGG
AGATACGTGCCTAACCTGCTGGGCTCTTCCTACATTGGTGCCTCGCCTCC
TTACGGCCACGGATACCATCGCTACATCTTCACCATCGTGGCGCTGAGCG
AGCCCCTCGACATTGCTCAGCCTGACAAAGCGACCATCTCAGTTATCAAG
GAAGCCATGGTTGGCAAAGTGATCGGCTGGGGCGAATGGGTACGCCTTGT
CCTCGCCCATCGACCCTCGTCGTCGTCCTTCACGCCCCTGGACGAATCAG
TATTAGCCACTACCGCGAGCCTAGAACGTATAAACGACCCACCAGAGCTA
TCCTCAACCTGCTTCATAAACACCGCGAACCTCTGCATGGTGGCCTCAAC
CGACGACTCACACGCCCGTAGCGTTGCGGGGCCCGAACATCGTCCCCCTC
CAACCGCCTCTTTCCCCAACGACACGAATATCTTTTGCAGTGTTTCCAAC
ACTTCCAAGATTTTCATTAAGTTCCTCCCCAGTAGCGTTCTTACCATCAT
CAGCGATTCCTTTTCGTCCAGCTCTATCTGTCCCAACACTGTCTTACTCC
TCATACAGATGAACTGCGACAACGGCTCCTCGAACGCCAACATTGCCGGA
TCGAACAGCATGTTCCCCTCGTAAATGTTCTCAGTTTTCCTCCTCTATTT
GCAGCTTTTGCTGTTCAAAATTCTGTACTACATCCGCGGCCATGACAAGA
ACCTTATCACCAAGTCCGCTGCTTTTGCTCACTTATCTGAGCCCAACATG
AAGCTCGAGGCTCCGGAGTGCGGGTTGCCCGGATGTAGCCTCCTCGAACA
TCACACTTATCTCGACCTCGAAAAAGGAGGAAGATTTCCTCACCTTCGCT
GGACGATGCCTCGTTCCGGTGAAGCCAAAGAGTTTGTGCTGATTTGTGAG
GATCCCGACGTCCCTATCCCGTCTATGGTTTTTGTCCACGGCCTGTTCTT
CGAGATTCCACCTACTTGCTTTGTCGCATATGATGACGACGTTGACAAGA
ATCCTAATATGCCTGGCCGCGTCACCTTTGCTGGTTGGAGATACGTGCCT
AACCTGCTGGGCTCTTCCTACATTGGTGCCTCGCCTCCTTACGGCCACGG
ATACCATCGCTACATCTTCACCATCGTGGCGCTGAGCGAGCCCCTCGACA
TTGCTCAGCCTGACAAAGCGACCATCTCAGTTATCAAGGAAGCCATGGTT
GGCAAAGTGATCGGCTGGGGCGAATG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_17480CAN33_17480Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17480-T1CAN33_17480-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17480-T1.cdsCAN33_17480-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17480-T1.exon2CAN33_17480-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_17480-T1.exon1CAN33_17480-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-22)
DBxrefInterPro:IPR036610
DBxrefInterPro:IPR008914
DBxrefPFAM:PF01161
ProductPhosphatidylethanolamine-binding protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:822000..823527 -
Powered by Drupal