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CAN33_17490-T1, CAN33_17490-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_17490-T1
Unique NameCAN33_17490-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:826714..828374-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_17490-T1 ID=CAN33_17490-T1|Name=CAN33_17490-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1661bp|location=Sequence derived from alignment at NKJJ01000011.1:826714..828374- (Aspergillus niger FDAARGOS_311)
ATGGACTCAGTCACAGCGCCAGACATGGACCACTTCGACGCAGGCTCGCT
GCGCTCCTACCCATCCACTGTCGCATTGGATAATTGCCCTCCCTCAAACG
CGATTTCGCCATGGCGGTCATCCTCCTCTTCCGCTCCCACCATTGAAGAT
GAATCGCGAGAGGGGCACAGGCGACGGCCCAGCGAGATCCTCCTGGGATT
CCCTCGCCCTCCTAGCCGTGCACATGTCGCAACGAAAACCCTCATCTCGA
GGCCTTCTATCAAGACGCTTCGTAGAAATTTTATGATTCACGAGCTGCCC
CTTCTTCAACAGCCGAACCCGTACTATGACGAATCTGAAGAGTTCAATCC
TGTCTATGACCCTGGCTTATCCTATGATCTGATTGCACCATCGCACGATA
CAAACGAAGCTCCGCCGCTTCATGACCTTGAGCGTCTCGCTGATCTCGTA
TTCTCATCGGAGCATATGCTCACCATTCTGAACAACCCGCGCTATCTTGC
GCAATTTCGCGAATTCCTGCTTGAGGAACGTCCCCGCTCTCTCCATCGGT
TGACTTATTATTTGACGGCGCGCAAGGCTCTCAAGGCAATAGACTACGCG
AACGGCTTGGTGCGATGCGTCGTCGATGATGCTCAGCCGAAATCATCAAC
GTCGGGGTTGTTAGGACAGAAGATCGGAGAGATCGCCCACCCGGCACTGC
AACAACGAGTACAGGAGGCTCTCAAGGTACTCACTGACGAGGAACTCCCT
GCATTTATTACCTCGCGCTGCATCGGCATTACCAGCCGGGTAGTGGAGGA
AAGGGTCAGGGGGACCTTACCGAAAAGATTTCAAAGAACAGACGAGGAGA
AGGGGTTGGCGGAGGTATTCTGTCTTACGGATCCATCGAGGCGGGACAAT
CCGATAGTTTTTGCTTCGGAGGGTGAGTAGATTCCTGTTTTTGCTGAGTG
TGTGCTCTTTTGCTGATATTTGTTGGTTGTGGCGGGGCGCAGAATTCCAT
CGCACGACACAGTATGGAATGGACTACGTGCTTGGTCGGAATTGTCGGTT
TTTGCAGGGACCAAAGACAAATGCGAATAGTGTGAGGAGAATTAAGGAGG
CGATAGAAGCGGGGAGGCATCATTCAGAGTTGTTTCTGAATTAGTGAGTT
TGTCTGCACCCATACTGCGATCATTCGCTGACAGTCGAACGATGTAGCCG
TCGGGATGGCTCACCATTTATGAATCTCCTCCAATGTGCTCCACTATGCG
ACAGCCATGGCAGAGTGCGGTACTTTATTGGTGCTCAGATCGATGTTAGT
GGATTGGTTATGGACGGCGTCCAGATGGAATCGCTGCGAGATTTGCAACA
GCAACAGATGAGAGATGGTGTTGAAGTGACAGATGCACCCCTTGGGATCC
AGAAAGACGAGTTTCGTGATTTGAGTGAGCTATTCAGTCCACGCGAGTTG
AAGGTCACCCAAGATATTGGAGGAAGTCTCTTCCAGCCGGTGACTTCTCC
GGCATTGCGCAATAGCTCCCGGACAAAGTGGTCTGTTGCCGATGGCGAGG
ATTCTGTTGAGCCGAAGGCGAAAAGAGAGACAAGCATCATGACAGGTACA
GCGTTGGTGGGCGCTTACGAGAATGTAAGTATCCCTCACCTAATGTGGGG
CAGAGGGCTAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:826714..828374-

>CAN33_17490-T1 ID=CAN33_17490-T1|Name=CAN33_17490-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6024bp|location=Sequence derived from alignment at NKJJ01000011.1:826714..828374- (Aspergillus niger FDAARGOS_311)
GGCTAACCGTCGGGATGGCTCACCATTTATGAATCTCCTCCAATGTGCTC
CACTATGCGACAGCCATGGCAGAGTGCGGTACTTTATTGGTGCTCAGATC
GATGTTAGTGGATTGGTTATGGACGGCGTCCAGATGGAATCGCTGCGAGA
TTTGCAACAGCAACAGATGAGAGATGGTGTTGAAGTGACAGATGCACCCC
TTGGGATCCAGAAAGACGAGTTTCGTGATTTGAGTGAGCTATTCAGTCCA
CGCGAGTTGAAGGTCACCCAAGATATTGGAGGAAGTCTCTTCCAGCCGGT
GACTTCTCCGGCATTGCGCAATAGCTCCCGGACAAAGTGGTCTGTTGCCG
ATGGCGAGGATTCTGTTGAGCCGAAGGCGAAAAGAGAGACAAGCATCATG
ACAGGTACAGCGTTGGTGGGCGCTTACGAGAATAATTCCATCGCACGACA
CAGTATGGAATGGACTACGTGCTTGGTCGGAATTGTCGGTTTTTGCAGGG
ACCAAAGACAAATGCGAATAGTGTGAGGAGAATTAAGGAGGCGATAGAAG
CGGGGAGGCATCATTCAGAGTTGTTTCTGAATTAATGGACTCAGTCACAG
CGCCAGACATGGACCACTTCGACGCAGGCTCGCTGCGCTCCTACCCATCC
ACTGTCGCATTGGATAATTGCCCTCCCTCAAACGCGATTTCGCCATGGCG
GTCATCCTCCTCTTCCGCTCCCACCATTGAAGATGAATCGCGAGAGGGGC
ACAGGCGACGGCCCAGCGAGATCCTCCTGGGATTCCCTCGCCCTCCTAGC
CGTGCACATGTCGCAACGAAAACCCTCATCTCGAGGCCTTCTATCAAGAC
GCTTCGTAGAAATTTTATGATTCACGAGCTGCCCCTTCTTCAACAGCCGA
ACCCGTACTATGACGAATCTGAAGAGTTCAATCCTGTCTATGACCCTGGC
TTATCCTATGATCTGATTGCACCATCGCACGATACAAACGAAGCTCCGCC
GCTTCATGACCTTGAGCGTCTCGCTGATCTCGTATTCTCATCGGAGCATA
TGCTCACCATTCTGAACAACCCGCGCTATCTTGCGCAATTTCGCGAATTC
CTGCTTGAGGAACGTCCCCGCTCTCTCCATCGGTTGACTTATTATTTGAC
GGCGCGCAAGGCTCTCAAGGCAATAGACTACGCGAACGGCTTGGTGCGAT
GCGTCGTCGATGATGCTCAGCCGAAATCATCAACGTCGGGGTTGTTAGGA
CAGAAGATCGGAGAGATCGCCCACCCGGCACTGCAACAACGAGTACAGGA
GGCTCTCAAGGTACTCACTGACGAGGAACTCCCTGCATTTATTACCTCGC
GCTGCATCGGCATTACCAGCCGGGTAGTGGAGGAAAGGGTCAGGGGGACC
TTACCGAAAAGATTTCAAAGAACAGACGAGGAGAAGGGGTTGGCGGAGGT
ATTCTGTCTTACGGATCCATCGAGGCGGGACAATCCGATAGTTTTTGCTT
CGGAGGGGCTAACCGTCGGGATGGCTCACCATTTATGAATCTCCTCCAAT
GTGCTCCACTATGCGACAGCCATGGCAGAGTGCGGTACTTTATTGGTGCT
CAGATCGATGTTAGTGGATTGGTTATGGACGGCGTCCAGATGGAATCGCT
GCGAGATTTGCAACAGCAACAGATGAGAGATGGTGTTGAAGTGACAGATG
CACCCCTTGGGATCCAGAAAGACGAGTTTCGTGATTTGAGTGAGCTATTC
AGTCCACGCGAGTTGAAGGTCACCCAAGATATTGGAGGAAGTCTCTTCCA
GCCGGTGACTTCTCCGGCATTGCGCAATAGCTCCCGGACAAAGTGGTCTG
TTGCCGATGGCGAGGATTCTGTTGAGCCGAAGGCGAAAAGAGAGACAAGC
ATCATGACAGGTACAGCGTTGGTGGGCGCTTACGAGAATAATTCCATCGC
ACGACACAGTATGGAATGGACTACGTGCTTGGTCGGAATTGTCGGTTTTT
GCAGGGACCAAAGACAAATGCGAATAGTGTGAGGAGAATTAAGGAGGCGA
TAGAAGCGGGGAGGCATCATTCAGAGTTGTTTCTGAATTAATGGACTCAG
TCACAGCGCCAGACATGGACCACTTCGACGCAGGCTCGCTGCGCTCCTAC
CCATCCACTGTCGCATTGGATAATTGCCCTCCCTCAAACGCGATTTCGCC
ATGGCGGTCATCCTCCTCTTCCGCTCCCACCATTGAAGATGAATCGCGAG
AGGGGCACAGGCGACGGCCCAGCGAGATCCTCCTGGGATTCCCTCGCCCT
CCTAGCCGTGCACATGTCGCAACGAAAACCCTCATCTCGAGGCCTTCTAT
CAAGACGCTTCGTAGAAATTTTATGATTCACGAGCTGCCCCTTCTTCAAC
AGCCGAACCCGTACTATGACGAATCTGAAGAGTTCAATCCTGTCTATGAC
CCTGGCTTATCCTATGATCTGATTGCACCATCGCACGATACAAACGAAGC
TCCGCCGCTTCATGACCTTGAGCGTCTCGCTGATCTCGTATTCTCATCGG
AGCATATGCTCACCATTCTGAACAACCCGCGCTATCTTGCGCAATTTCGC
GAATTCCTGCTTGAGGAACGTCCCCGCTCTCTCCATCGGTTGACTTATTA
TTTGACGGCGCGCAAGGCTCTCAAGGCAATAGACTACGCGAACGGCTTGG
TGCGATGCGTCGTCGATGATGCTCAGCCGAAATCATCAACGTCGGGGTTG
TTAGGACAGAAGATCGGAGAGATCGCCCACCCGGCACTGCAACAACGAGT
ACAGGAGGCTCTCAAGGTACTCACTGACGAGGAACTCCCTGCATTTATTA
CCTCGCGCTGCATCGGCATTACCAGCCGGGTAGTGGAGGAAAGGGTCAGG
GGGACCTTACCGAAAAGATTTCAAAGAACAGACGAGGAGAAGGGGTTGGC
GGAGGTATTCTGTCTTACGGATCCATCGAGGCGGGACAATCCGATAGTTT
TTGCTTCGGAGGGGCTAACCGTCGGGATGGCTCACCATTTATGAATCTCC
TCCAATGTGCTCCACTATGCGACAGCCATGGCAGAGTGCGGTACTTTATT
GGTGCTCAGATCGATGTTAGTGGATTGGTTATGGACGGCGTCCAGATGGA
ATCGCTGCGAGATTTGCAACAGCAACAGATGAGAGATGGTGTTGAAGTGA
CAGATGCACCCCTTGGGATCCAGAAAGACGAGTTTCGTGATTTGAGTGAG
CTATTCAGTCCACGCGAGTTGAAGGTCACCCAAGATATTGGAGGAAGTCT
CTTCCAGCCGGTGACTTCTCCGGCATTGCGCAATAGCTCCCGGACAAAGT
GGTCTGTTGCCGATGGCGAGGATTCTGTTGAGCCGAAGGCGAAAAGAGAG
ACAAGCATCATGACAGGTACAGCGTTGGTGGGCGCTTACGAGAATAATTC
CATCGCACGACACAGTATGGAATGGACTACGTGCTTGGTCGGAATTGTCG
GTTTTTGCAGGGACCAAAGACAAATGCGAATAGTGTGAGGAGAATTAAGG
AGGCGATAGAAGCGGGGAGGCATCATTCAGAGTTGTTTCTGAATTAATGG
ACTCAGTCACAGCGCCAGACATGGACCACTTCGACGCAGGCTCGCTGCGC
TCCTACCCATCCACTGTCGCATTGGATAATTGCCCTCCCTCAAACGCGAT
TTCGCCATGGCGGTCATCCTCCTCTTCCGCTCCCACCATTGAAGATGAAT
CGCGAGAGGGGCACAGGCGACGGCCCAGCGAGATCCTCCTGGGATTCCCT
CGCCCTCCTAGCCGTGCACATGTCGCAACGAAAACCCTCATCTCGAGGCC
TTCTATCAAGACGCTTCGTAGAAATTTTATGATTCACGAGCTGCCCCTTC
TTCAACAGCCGAACCCGTACTATGACGAATCTGAAGAGTTCAATCCTGTC
TATGACCCTGGCTTATCCTATGATCTGATTGCACCATCGCACGATACAAA
CGAAGCTCCGCCGCTTCATGACCTTGAGCGTCTCGCTGATCTCGTATTCT
CATCGGAGCATATGCTCACCATTCTGAACAACCCGCGCTATCTTGCGCAA
TTTCGCGAATTCCTGCTTGAGGAACGTCCCCGCTCTCTCCATCGGTTGAC
TTATTATTTGACGGCGCGCAAGGCTCTCAAGGCAATAGACTACGCGAACG
GCTTGGTGCGATGCGTCGTCGATGATGCTCAGCCGAAATCATCAACGTCG
GGGTTGTTAGGACAGAAGATCGGAGAGATCGCCCACCCGGCACTGCAACA
ACGAGTACAGGAGGCTCTCAAGGTACTCACTGACGAGGAACTCCCTGCAT
TTATTACCTCGCGCTGCATCGGCATTACCAGCCGGGTAGTGGAGGAAAGG
GTCAGGGGGACCTTACCGAAAAGATTTCAAAGAACAGACGAGGAGAAGGG
GTTGGCGGAGGTATTCTGTCTTACGGATCCATCGAGGCGGGACAATCCGA
TAGTTTTTGCTTCGGAGGGGCTAACCGTCGGGATGGCTCACCATTTATGA
ATCTCCTCCAATGTGCTCCACTATGCGACAGCCATGGCAGAGTGCGGTAC
TTTATTGGTGCTCAGATCGATGTTAGTGGATTGGTTATGGACGGCGTCCA
GATGGAATCGCTGCGAGATTTGCAACAGCAACAGATGAGAGATGGTGTTG
AAGTGACAGATGCACCCCTTGGGATCCAGAAAGACGAGTTTCGTGATTTG
AGTGAGCTATTCAGTCCACGCGAGTTGAAGGTCACCCAAGATATTGGAGG
AAGTCTCTTCCAGCCGGTGACTTCTCCGGCATTGCGCAATAGCTCCCGGA
CAAAGTGGTCTGTTGCCGATGGCGAGGATTCTGTTGAGCCGAAGGCGAAA
AGAGAGACAAGCATCATGACAGGTACAGCGTTGGTGGGCGCTTACGAGAA
TAATTCCATCGCACGACACAGTATGGAATGGACTACGTGCTTGGTCGGAA
TTGTCGGTTTTTGCAGGGACCAAAGACAAATGCGAATAGTGTGAGGAGAA
TTAAGGAGGCGATAGAAGCGGGGAGGCATCATTCAGAGTTGTTTCTGAAT
TAATGGACTCAGTCACAGCGCCAGACATGGACCACTTCGACGCAGGCTCG
CTGCGCTCCTACCCATCCACTGTCGCATTGGATAATTGCCCTCCCTCAAA
CGCGATTTCGCCATGGCGGTCATCCTCCTCTTCCGCTCCCACCATTGAAG
ATGAATCGCGAGAGGGGCACAGGCGACGGCCCAGCGAGATCCTCCTGGGA
TTCCCTCGCCCTCCTAGCCGTGCACATGTCGCAACGAAAACCCTCATCTC
GAGGCCTTCTATCAAGACGCTTCGTAGAAATTTTATGATTCACGAGCTGC
CCCTTCTTCAACAGCCGAACCCGTACTATGACGAATCTGAAGAGTTCAAT
CCTGTCTATGACCCTGGCTTATCCTATGATCTGATTGCACCATCGCACGA
TACAAACGAAGCTCCGCCGCTTCATGACCTTGAGCGTCTCGCTGATCTCG
TATTCTCATCGGAGCATATGCTCACCATTCTGAACAACCCGCGCTATCTT
GCGCAATTTCGCGAATTCCTGCTTGAGGAACGTCCCCGCTCTCTCCATCG
GTTGACTTATTATTTGACGGCGCGCAAGGCTCTCAAGGCAATAGACTACG
CGAACGGCTTGGTGCGATGCGTCGTCGATGATGCTCAGCCGAAATCATCA
ACGTCGGGGTTGTTAGGACAGAAGATCGGAGAGATCGCCCACCCGGCACT
GCAACAACGAGTACAGGAGGCTCTCAAGGTACTCACTGACGAGGAACTCC
CTGCATTTATTACCTCGCGCTGCATCGGCATTACCAGCCGGGTAGTGGAG
GAAAGGGTCAGGGGGACCTTACCGAAAAGATTTCAAAGAACAGACGAGGA
GAAGGGGTTGGCGGAGGTATTCTGTCTTACGGATCCATCGAGGCGGGACA
ATCCGATAGTTTTTGCTTCGGAGG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_17490CAN33_17490Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17490-T1CAN33_17490-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17490-T1.cdsCAN33_17490-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17490-T1.exon4CAN33_17490-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_17490-T1.exon3CAN33_17490-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_17490-T1.exon2CAN33_17490-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_17490-T1.exon1CAN33_17490-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR035965
DBxrefInterPro:IPR000700
DBxrefInterPro:IPR000014
DBxrefPFAM:PF13426
ProductPAS domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:826714..828374 -
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