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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:840601..841878- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_17515-T1 ID=CAN33_17515-T1|Name=CAN33_17515-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1278bp|location=Sequence derived from alignment at NKJJ01000011.1:840601..841878- (Aspergillus niger FDAARGOS_311)
ATGAACTCATCAGCAGAGCGGACTAACGCTCCACCGCGGCGGAAGTCTTG
CGAGGCCTGCAAAATCGCCAAGCGACGCTGTGATCTCGCCTGGCCAGCCT
GCTTCCGATGTGCCCGCCGCAACCAAGCCTGTATCTACCCTGGCAGACAA
CCACAAAGCATGGACGTACAGGCAACATCGCTTGCAATGAATTTATTGGA
AGACCCTTCGTTACCGGTTCATGCCGAAGCCCAGTGTGTGCCCGATATCC
ACTTGCACCTCCCTGAGGTAGACTCATTATGTGCTCTTGAGCTTCCCACT
CCTGAAACGGAAGTAACCAACCTTTTGGCCCAATGCCCGCCTCTGGAAAT
CCCTGGATTATCGTTGACACAGGAAGGTCCGGGTCCCACTCTGATTAGAA
CGAGGTCTTCGCTGTCTATCTCGGCTATTGTAACGGAGCGCTTACAATTC
GGCATGGATGTGCTGAAACAAGCACCAAGAATGATGGTCCTAGAAAACCA
GACGCCCTGGTGCCATCGCCAATTGTACAAAGATGGCATGCCCAGGTCAA
TGCAAGGTACGTTTGTAGCACCTCACCTATGCTCTATGCTAAGAAATGCA
GACGCCGTCGCCTGCTGCGCCCTGTACATGGCTCGAAATGAAATCAATGC
TCCAGTCATCCTCTCTTCCTTCAAAACCCGCATTGACGATTTGCTCGCTT
CCCCGCCTCCAAAAACACCGCTCGAAGCACTCGCCCATACACAGTCCCTG
ATACTGTATCAGATAATGCGCCTGTTCGACGGAGACATCCACGCCCGGCT
GTCCGCCGAACCTCTCATTCCTATGCTGGAAACATCGGCCTTCAGCCTTC
TGAACTATGTTTACTTCCCGGCCGCAGAGCCCGACACTGCCCTTACTGCG
CCCATGGATGCTGTCATGCAGTCCTGGACAGAGTGGGTATACCAAGAATC
TGCGCGTCGCACCGCCCTCTTCACGTTCTATCTGGTGCAAATATACCGCT
TAGTCACAGGCGAGAACAACCTCAGCTGCGACGGCCGTTTGGGCCTCATC
CACTCATGGTATTTATCCGCGTATCTGTGGAGTGCGCAGACTGCATTCGA
CTTTGCCGTTGCATGGAACGAGAACCAGCATTTTGTGGTCTGCAATGCAG
ATTTTGGCCATGTGCTTGAACGCGCGCGGCCGTCTGATGTGGATGTCTTT
GGACGGATGCTCCTCAGTACGCTTTTAGGAATCGATCAGGCCAAGGCCTG
GTTTTACTCCCGAGGAGCTATTTTGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:840601..841878- >CAN33_17515-T1 ID=CAN33_17515-T1|Name=CAN33_17515-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2466bp|location=Sequence derived from alignment at NKJJ01000011.1:840601..841878- (Aspergillus niger FDAARGOS_311)
ACGCCGTCGCCTGCTGCGCCCTGTACATGGCTCGAAATGAAATCAATGCT
CCAGTCATCCTCTCTTCCTTCAAAACCCGCATTGACGATTTGCTCGCTTC
CCCGCCTCCAAAAACACCGCTCGAAGCACTCGCCCATACACAGTCCCTGA
TACTGTATCAGATAATGCGCCTGTTCGACGGAGACATCCACGCCCGGCTG
TCCGCCGAACCTCTCATTCCTATGCTGGAAACATCGGCCTTCAGCCTTCT
GAACTATGTTTACTTCCCGGCCGCAGAGCCCGACACTGCCCTTACTGCGC
CCATGGATGCTGTCATGCAGTCCTGGACAGAGTGGGTATACCAAGAATCT
GCGCGTCGCACCGCCCTCTTCACGTTCTATCTGGTGCAAATATACCGCTT
AGTCACAGGCGAGAACAACCTCAGCTGCGACGGCCGTTTGGGCCTCATCC
ACTCATGGTATTTATCCGCGTATCTGTGGAGTGCGCAGACTGCATTCGAC
TTTGCCGTTGCATGGAACGAGAACCAGCATTTTGTGGTCTGCAATGCAGA
TTTTGGCCATGTGCTTGAACGCGCGCGGCCGTCTGATGTGGATGTCTTTG
GACGGATGCTCCTCAGTACGCTTTTAGGAATCGATCAGGCCAAGGCCTGG
TTTTACTCCCGAGGAGCTATTTTGTAAATGAACTCATCAGCAGAGCGGAC
TAACGCTCCACCGCGGCGGAAGTCTTGCGAGGCCTGCAAAATCGCCAAGC
GACGCTGTGATCTCGCCTGGCCAGCCTGCTTCCGATGTGCCCGCCGCAAC
CAAGCCTGTATCTACCCTGGCAGACAACCACAAAGCATGGACGTACAGGC
AACATCGCTTGCAATGAATTTATTGGAAGACCCTTCGTTACCGGTTCATG
CCGAAGCCCAGTGTGTGCCCGATATCCACTTGCACCTCCCTGAGGTAGAC
TCATTATGTGCTCTTGAGCTTCCCACTCCTGAAACGGAAGTAACCAACCT
TTTGGCCCAATGCCCGCCTCTGGAAATCCCTGGATTATCGTTGACACAGG
AAGGTCCGGGTCCCACTCTGATTAGAACGAGGTCTTCGCTGTCTATCTCG
GCTATTGTAACGGAGCGCTTACAATTCGGCATGGATGTGCTGAAACAAGC
ACCAAGAATGATGGTCCTAGAAAACCAGACGCCCTGGTGCCATCGCCAAT
TGTACAAAGATGGCATGCCCAGGTCAATGCAAGACGCCGTCGCCTGCTGC
GCCCTGTACATGGCTCGAAATGAAATCAATGCTCCAGTCATCCTCTCTTC
CTTCAAAACCCGCATTGACGATTTGCTCGCTTCCCCGCCTCCAAAAACAC
CGCTCGAAGCACTCGCCCATACACAGTCCCTGATACTGTATCAGATAATG
CGCCTGTTCGACGGAGACATCCACGCCCGGCTGTCCGCCGAACCTCTCAT
TCCTATGCTGGAAACATCGGCCTTCAGCCTTCTGAACTATGTTTACTTCC
CGGCCGCAGAGCCCGACACTGCCCTTACTGCGCCCATGGATGCTGTCATG
CAGTCCTGGACAGAGTGGGTATACCAAGAATCTGCGCGTCGCACCGCCCT
CTTCACGTTCTATCTGGTGCAAATATACCGCTTAGTCACAGGCGAGAACA
ACCTCAGCTGCGACGGCCGTTTGGGCCTCATCCACTCATGGTATTTATCC
GCGTATCTGTGGAGTGCGCAGACTGCATTCGACTTTGCCGTTGCATGGAA
CGAGAACCAGCATTTTGTGGTCTGCAATGCAGATTTTGGCCATGTGCTTG
AACGCGCGCGGCCGTCTGATGTGGATGTCTTTGGACGGATGCTCCTCAGT
ACGCTTTTAGGAATCGATCAGGCCAAGGCCTGGTTTTACTCCCGAGGAGC
TATTTTGTAAATGAACTCATCAGCAGAGCGGACTAACGCTCCACCGCGGC
GGAAGTCTTGCGAGGCCTGCAAAATCGCCAAGCGACGCTGTGATCTCGCC
TGGCCAGCCTGCTTCCGATGTGCCCGCCGCAACCAAGCCTGTATCTACCC
TGGCAGACAACCACAAAGCATGGACGTACAGGCAACATCGCTTGCAATGA
ATTTATTGGAAGACCCTTCGTTACCGGTTCATGCCGAAGCCCAGTGTGTG
CCCGATATCCACTTGCACCTCCCTGAGGTAGACTCATTATGTGCTCTTGA
GCTTCCCACTCCTGAAACGGAAGTAACCAACCTTTTGGCCCAATGCCCGC
CTCTGGAAATCCCTGGATTATCGTTGACACAGGAAGGTCCGGGTCCCACT
CTGATTAGAACGAGGTCTTCGCTGTCTATCTCGGCTATTGTAACGGAGCG
CTTACAATTCGGCATGGATGTGCTGAAACAAGCACCAAGAATGATGGTCC
TAGAAAACCAGACGCCCTGGTGCCATCGCCAATTGTACAAAGATGGCATG
CCCAGGTCAATGCAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | Fungal Zn(2)-Cys(6) binuclear cluster domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:840601..841878 - |
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