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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:843436..845388- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_17525-T1 ID=CAN33_17525-T1|Name=CAN33_17525-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1953bp|location=Sequence derived from alignment at NKJJ01000011.1:843436..845388- (Aspergillus niger FDAARGOS_311)
ATGGCAGAACGGACACCTATCAAGCCCTCATCATCCACAGAAGGGTTCTT
TCAACCCCTTCCCACTATCCCGCCGTGCTATAGCTTCACTACCGCAAGCG
CCCGCGGAAACCACTCTTCATCCGACGATGTAGTTCTAGGCCGGATCCTG
GAGCTTTATCTTCCCCACAACTGCGGCAACGCGGGCTACTCCATCCACAA
TCTCTCTCGCCGTGCCCTAGAGCCTAGTATCCTTCAGCACAGCGTCGACG
CAGAGACCAACCCGCCTGTTCTCCGTCCGCTCACCACCTTCGGCGAAGAA
AACCGTGTTAATCCCTTATGGACTTCAAATGGTTGGCAGGCGCTCAAGGC
AATTGGCCAGGAAGAAGGTCTCGTGAGTGTCGCATACGAGACGGAAAACA
CAACCTGGAATCGCCGCGTGCATCAATTTGCCCTCAACCATGTTTGGTCC
GGTAGCGCTGCCATGACGGGGTGTCCTGCCTCTATGACGGATGGGGCAGC
CAAACTGCTGGCAGCTCATCTCAATGAACCGGACGGGGACCAACCCGGTC
GTAGCGAAGTCTTGCGCGAGGCACACCGGCGCCTCATTTCACGGGACCCT
AAAGTCGCCTGGACAAGTGGGCAATGGATGACGGAGCGAAAGGGTGGCAG
CGACGTACGCGGGACTGAGACGATCGCACGTCGGCTGACTCGCGAAGAAC
TGCTTCAGGAAGCCTCCCATCACGACGCGCACGGCATGCCGCTTGGTCCG
TGGCGTATTGATGGATTCAAGTGGTTCAGCAGTGCGACCGACTCGGAAAT
GACGGTGATGCTGGCGCAGACCACCAAAGGGCTCAGTTTGTTCTACGCGC
CAGTGCGGCGGCGCGCTGGACGGTCGGCGTCATCTTCGAGTGACACTGAG
TTGAATGGTATCCGTTTGCAACGGTTGAAGAACAAAGTGGGCACTAAGCA
ACTGCCTACCGCGGAGTTGGAGCTCAAGGGGGTGCGCGGCTGGCTGATCG
GGGAGGAGGGCCGAGGTGTAAAAGAGGTTGCGACCATCCTCAATATCACC
CGCCTGTACACAGCGGCCGGCTCGACGGCGGGATGGGGCCGTGGGTTAGC
CATTTGCCGGGCATACACACGAGCTCGCAAAGTTCAAGGCTCACTTCTTG
AGGATATCCCGCAGCACGTGCGCTGGATGGCGGGTGAGACGGTAAAATAT
GCGGCAGCCATGCACTGGGTCTTCTTTGGCATCGCTCTGCAGGGGTCCGT
CGAGCAGGAATGGGACCTGATGGTTCGTAATACCAAAGCTGCTGCCATAA
TCCCGCGTGATAGGAAGCAAGCTGCAACTCTGCTTCGACTCATCACCCCG
GCGTTAAAGGCTCTGGCCAGCGTGGGCTCTGTCCAAGGTCTCAGGGAGTG
CATGGAAGGACTCGGTGGGGTTGGCTATTGCGAAAACAATGAGGACGGTG
GGATTCTCAATGTAGCGAGGATCTTCCGAGATACGCTGGTCAATCCCATC
TGGGAGGGTACGGTTAGTGTGATGGCTGAGGATGTGGTAAGAGTCATTAA
GGACCGACGCCTCGGTGATGGTAAAGTCATCGACAACGTCCTCGGGAAAT
GGGTGCACAATGTACTCCAACACTGTCAACATATGCTTCCCGACGAGTGT
GCGTTCGTCAAGAAAAGACTGGAGAGTCTCGTCCAAATCACGAATCGGGC
TGACAAGGCGGAGCTGCTTTGGCGGGGGAGGGAAATAATTGGTCATTTAC
AAGCCATCGTTTGCTCTTGTCTGCTGATGTATGATGCTTGCACTGATGGT
AATGAGGTAGACGTTATCATGGCAGCAAGATATGTTCAGTCATTTGCGGA
CTCTGGTGTACAGCCACCGTCACAATGGGATGTTGAGTCACGGAAGGATA
GAATGATATTCTTAGGAGAGAATATGGCCCGGGCTGTACATGGGAAGCTT
TAG back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:843436..845388- >CAN33_17525-T1 ID=CAN33_17525-T1|Name=CAN33_17525-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1953bp|location=Sequence derived from alignment at NKJJ01000011.1:843436..845388- (Aspergillus niger FDAARGOS_311)
ATGGCAGAACGGACACCTATCAAGCCCTCATCATCCACAGAAGGGTTCTT
TCAACCCCTTCCCACTATCCCGCCGTGCTATAGCTTCACTACCGCAAGCG
CCCGCGGAAACCACTCTTCATCCGACGATGTAGTTCTAGGCCGGATCCTG
GAGCTTTATCTTCCCCACAACTGCGGCAACGCGGGCTACTCCATCCACAA
TCTCTCTCGCCGTGCCCTAGAGCCTAGTATCCTTCAGCACAGCGTCGACG
CAGAGACCAACCCGCCTGTTCTCCGTCCGCTCACCACCTTCGGCGAAGAA
AACCGTGTTAATCCCTTATGGACTTCAAATGGTTGGCAGGCGCTCAAGGC
AATTGGCCAGGAAGAAGGTCTCGTGAGTGTCGCATACGAGACGGAAAACA
CAACCTGGAATCGCCGCGTGCATCAATTTGCCCTCAACCATGTTTGGTCC
GGTAGCGCTGCCATGACGGGGTGTCCTGCCTCTATGACGGATGGGGCAGC
CAAACTGCTGGCAGCTCATCTCAATGAACCGGACGGGGACCAACCCGGTC
GTAGCGAAGTCTTGCGCGAGGCACACCGGCGCCTCATTTCACGGGACCCT
AAAGTCGCCTGGACAAGTGGGCAATGGATGACGGAGCGAAAGGGTGGCAG
CGACGTACGCGGGACTGAGACGATCGCACGTCGGCTGACTCGCGAAGAAC
TGCTTCAGGAAGCCTCCCATCACGACGCGCACGGCATGCCGCTTGGTCCG
TGGCGTATTGATGGATTCAAGTGGTTCAGCAGTGCGACCGACTCGGAAAT
GACGGTGATGCTGGCGCAGACCACCAAAGGGCTCAGTTTGTTCTACGCGC
CAGTGCGGCGGCGCGCTGGACGGTCGGCGTCATCTTCGAGTGACACTGAG
TTGAATGGTATCCGTTTGCAACGGTTGAAGAACAAAGTGGGCACTAAGCA
ACTGCCTACCGCGGAGTTGGAGCTCAAGGGGGTGCGCGGCTGGCTGATCG
GGGAGGAGGGCCGAGGTGTAAAAGAGGTTGCGACCATCCTCAATATCACC
CGCCTGTACACAGCGGCCGGCTCGACGGCGGGATGGGGCCGTGGGTTAGC
CATTTGCCGGGCATACACACGAGCTCGCAAAGTTCAAGGCTCACTTCTTG
AGGATATCCCGCAGCACGTGCGCTGGATGGCGGGTGAGACGGTAAAATAT
GCGGCAGCCATGCACTGGGTCTTCTTTGGCATCGCTCTGCAGGGGTCCGT
CGAGCAGGAATGGGACCTGATGGTTCGTAATACCAAAGCTGCTGCCATAA
TCCCGCGTGATAGGAAGCAAGCTGCAACTCTGCTTCGACTCATCACCCCG
GCGTTAAAGGCTCTGGCCAGCGTGGGCTCTGTCCAAGGTCTCAGGGAGTG
CATGGAAGGACTCGGTGGGGTTGGCTATTGCGAAAACAATGAGGACGGTG
GGATTCTCAATGTAGCGAGGATCTTCCGAGATACGCTGGTCAATCCCATC
TGGGAGGGTACGGTTAGTGTGATGGCTGAGGATGTGGTAAGAGTCATTAA
GGACCGACGCCTCGGTGATGGTAAAGTCATCGACAACGTCCTCGGGAAAT
GGGTGCACAATGTACTCCAACACTGTCAACATATGCTTCCCGACGAGTGT
GCGTTCGTCAAGAAAAGACTGGAGAGTCTCGTCCAAATCACGAATCGGGC
TGACAAGGCGGAGCTGCTTTGGCGGGGGAGGGAAATAATTGGTCATTTAC
AAGCCATCGTTTGCTCTTGTCTGCTGATGTATGATGCTTGCACTGATGGT
AATGAGGTAGACGTTATCATGGCAGCAAGATATGTTCAGTCATTTGCGGA
CTCTGGTGTACAGCCACCGTCACAATGGGATGTTGAGTCACGGAAGGATA
GAATGATATTCTTAGGAGAGAATATGGCCCGGGCTGTACATGGGAAGCTT
TAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036250 |
| DBxref | InterPro:IPR009100 |
| DBxref | InterPro:IPR041504 |
| DBxref | InterPro:IPR006091 |
| DBxref | InterPro:IPR009075 |
| DBxref | PFAM:PF18158 |
| DBxref | PFAM:PF02770 |
| DBxref | PFAM:PF00441 |
| Product | Acyl-CoA dehydrogenase C-terminal domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:843436..845388 - |
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