You are here

Home

CAN33_17585-T1, CAN33_17585-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_17585-T1
Unique NameCAN33_17585-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:878450..879247+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_17585-T1 ID=CAN33_17585-T1|Name=CAN33_17585-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=798bp|location=Sequence derived from alignment at NKJJ01000011.1:878450..879247+ (Aspergillus niger FDAARGOS_311)
ATGCGCGCACTAGTGATTGGCGGGACTGGGCGTTGTGGCAGACTTGTCAT
TGATGAGCTGTTGAGGCGAGGTAGGCTTCTACTATGTTATACTACCTCAG
ACACGTTGATGAATATGGCTAACATACCCAAGGCCACCACCAGGTCACTA
CCTTAGCGCGAACACCAGATGCGCTGGGAGATCCACGACCTAGCCTAAAT
GTCATCCAAGGTTAGTACACAATGAATTCTTGCTGCTGCTGCTGCTTGTT
GTAATATGTTCCACGGCTGACATGTCCCAGGCACTCCGATGAATCTAGAT
GACGTACGAGCTGCGTTTAAAGCAGACAAACCAGACGTGGTGATTGTGAC
GCTGAATGCGCCTCGAGCGAGCGATAGTCCATTTGCTGCTCCCATCTCTC
CGCCTCGTCTAATGGCCGACTGCAACGCCAATGTAGTGGCTGCGATGAAA
GAGTTTGGGGTTCGCAAGATCGTGATTCTCCAGGCGTTCGGGGTGGGAGC
ATCTTGGACTAATCTGCACATCCTGCTACGTCTACTCATGAAGACATCTA
ATATGTCACATCAGTACGATGATCACAACGAGACAGAGAGGGAAGTCCTG
GCCAGCGGGGTCGATTATGTGTTTGTGCGGCCGTCCCGGCTGGTCGAAAC
CGATGAAACCGCCATCAAGGTGTGGCCGGATGATGGCAAGGGAGTTCCTA
TGATGGCCAGTACAAGCCGGATCAGCGTGGCACGATATTTGGTCGATGTG
GCCGAGGGTGATGAATGGGATAACACGGCTCCAGTTATCACCAACTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000011.1:878450..879247+

>CAN33_17585-T1 ID=CAN33_17585-T1|Name=CAN33_17585-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1998bp|location=Sequence derived from alignment at NKJJ01000011.1:878450..879247+ (Aspergillus niger FDAARGOS_311)
ATGCGCGCACTAGTGATTGGCGGGACTGGGCGTTGTGGCAGACTTGTCAT
TGATGAGCTGTTGAGGCGAGGCCACCACCAGGTCACTACCTTAGCGCGAA
CACCAGATGCGCTGGGAGATCCACGACCTAGCCTAAATGTCATCCAAGGC
ACTCCGATGAATCTAGATGACGTACGAGCTGCGTTTAAAGCAGACAAACC
AGACGTGGTGATTGTGACGCTGAATGCGCCTCGAGCGAGCGATAGTCCAT
TTGCTGCTCCCATCTCTCCGCCTCGTCTAATGGCCGACTGCAACGCCAAT
GTAGTGGCTGCGATGAAAGAGTTTGGGGTTCGCAAGATCGTGATTCTCCA
GGCGTTCGGGGTGGGAGCATCTTGGACTAATCTGCACATCCTGCTACGTC
TACTCATGAAGACATCTAATATGTCACATCAGTACGATGATCACAACGAG
ACAGAGAGGGAAGTCCTGGCCAGCGGGGTCGATTATGTGTTTGTGCGGCC
GTCCCGGCTGGTCGAAACCGATGAAACCGCCATCAAGGTGTGGCCGGATG
ATGGCAAGGGAGTTCCTATGATGGCCAGTACAAGCCGGATCAGCGTGGCA
CGATATTTGGTCGATGTGGCCGAGGGTGATGAATGGGATAACACGGCTCC
AGTTATCACCAACTGAATGCGCGCACTAGTGATTGGCGGGACTGGGCGTT
GTGGCAGACTTGTCATTGATGAGCTGTTGAGGCGAGGCCACCACCAGGTC
ACTACCTTAGCGCGAACACCAGATGCGCTGGGAGATCCACGACCTAGCCT
AAATGTCATCCAAGGCACTCCGATGAATCTAGATGACGTACGAGCTGCGT
TTAAAGCAGACAAACCAGACGTGGTGATTGTGACGCTGAATGCGCCTCGA
GCGAGCGATAGTCCATTTGCTGCTCCCATCTCTCCGCCTCGTCTAATGGC
CGACTGCAACGCCAATGTAGTGGCTGCGATGAAAGAGTTTGGGGTTCGCA
AGATCGTGATTCTCCAGGCGTTCGGGGTGGGAGCATCTTGGACTAATCTG
CACATCCTGCTACGTCTACTCATGAAGACATCTAATATGTCACATCAGTA
CGATGATCACAACGAGACAGAGAGGGAAGTCCTGGCCAGCGGGGTCGATT
ATGTGTTTGTGCGGCCGTCCCGGCTGGTCGAAACCGATGAAACCGCCATC
AAGGTGTGGCCGGATGATGGCAAGGGAGTTCCTATGATGGCCAGTACAAG
CCGGATCAGCGTGGCACGATATTTGGTCGATGTGGCCGAGGGTGATGAAT
GGGATAACACGGCTCCAGTTATCACCAACTGAATGCGCGCACTAGTGATT
GGCGGGACTGGGCGTTGTGGCAGACTTGTCATTGATGAGCTGTTGAGGCG
AGGCCACCACCAGGTCACTACCTTAGCGCGAACACCAGATGCGCTGGGAG
ATCCACGACCTAGCCTAAATGTCATCCAAGGCACTCCGATGAATCTAGAT
GACGTACGAGCTGCGTTTAAAGCAGACAAACCAGACGTGGTGATTGTGAC
GCTGAATGCGCCTCGAGCGAGCGATAGTCCATTTGCTGCTCCCATCTCTC
CGCCTCGTCTAATGGCCGACTGCAACGCCAATGTAGTGGCTGCGATGAAA
GAGTTTGGGGTTCGCAAGATCGTGATTCTCCAGGCGTTCGGGGTGGGAGC
ATCTTGGACTAATCTGCACATCCTGCTACGTCTACTCATGAAGACATCTA
ATATGTCACATCAGTACGATGATCACAACGAGACAGAGAGGGAAGTCCTG
GCCAGCGGGGTCGATTATGTGTTTGTGCGGCCGTCCCGGCTGGTCGAAAC
CGATGAAACCGCCATCAAGGTGTGGCCGGATGATGGCAAGGGAGTTCCTA
TGATGGCCAGTACAAGCCGGATCAGCGTGGCACGATATTTGGTCGATGTG
GCCGAGGGTGATGAATGGGATAACACGGCTCCAGTTATCACCAACTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_17585CAN33_17585Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17585-T1.exon1CAN33_17585-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_17585-T1.exon2CAN33_17585-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_17585-T1.exon3CAN33_17585-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17585-T1.cdsCAN33_17585-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17585-T1CAN33_17585-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR016040
DBxrefPFAM:PF13460
ProductNADH(P)-binding family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:878450..879247 +
Powered by Drupal