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CAN33_17660-T1, CAN33_17660-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_17660-T1
Unique NameCAN33_17660-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:905288..906120-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_17660-T1 ID=CAN33_17660-T1|Name=CAN33_17660-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=833bp|location=Sequence derived from alignment at NKJJ01000011.1:905288..906120- (Aspergillus niger FDAARGOS_311)
ATGTTGAAGATATGGTCGATGGTATGTCGCGACTGACTCCATCTACCTAC
CAACCCATACATTTCCCTCCCCACTAACACCCTTGAAACAGAAACAACAA
CAGCAGCAAGCTGAAAATGCCGAAGGAGCTGCTGGTAAAAAGAAGAAGAA
GGTCACCGCCGCCCAGCTGCGCGTGCAACGAGGTCTGTCCCTCCCTCCCT
CCCTCCCTACCTACCCTTTCTCAAACCACACCCCTCCCCAGGACGTTAAT
AACTAACCATGTATCAACATCGAGATAGACCTGCAAGAGCTCACCCTCGG
AAGTACAATGAAAATGTCCTTCCCGAACCCCGACGACATCTTGAACTTCA
CTCTTACTATCGAGCCGGATGAGGGCATGTACAAGGGCGGCGCATTCCAC
TTCAACTTCACGGTTAACCAGAATTTCCCGCATGATCCGCCGAAGGTCAA
GTGCACGCAGAAGATCTACCATCCGAATATTGATCTCGAGGGAAATGTGT
GCTTGAATATTTTGAGGGAGGATTGGAAGCCTGTCTTGAACCTGAATGCT
GTTATTGTGGGGATGCAGGTATGTCTTTTTCTTTTCCTCCCTTTCGGTAT
TGTTTTTGGTTGCTTTGGGGAGAGGGCGAGAGTTTGGATGCTTTTGGAGG
GTGTTTTGCTGATCTTTCTACCTTGCTTAGTTCCTCTTCCTGGAACCGAA
TGCTTCCGATCCGCTGAACAAGGAGGCCGCCGACGATCTGAGACAGAATC
GGGAAGCGTTCAAGCGCAACGTCAGGACGTCTATGGGTGGTGGTAGCGTG
AGGGGGATACAGTATGAGCGGGTTATGCGGTGA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:905288..906120-

>CAN33_17660-T1 ID=CAN33_17660-T1|Name=CAN33_17660-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2220bp|location=Sequence derived from alignment at NKJJ01000011.1:905288..906120- (Aspergillus niger FDAARGOS_311)
TTCCTCTTCCTGGAACCGAATGCTTCCGATCCGCTGAACAAGGAGGCCGC
CGACGATCTGAGACAGAATCGGGAAGCGTTCAAGCGCAACGTCAGGACGT
CTATGGGTGGTGGTAGCGTGAGGGGGATACAGTATGAGCGGGTTATGCGG
TGAACCTGCAAGAGCTCACCCTCGGAAGTACAATGAAAATGTCCTTCCCG
AACCCCGACGACATCTTGAACTTCACTCTTACTATCGAGCCGGATGAGGG
CATGTACAAGGGCGGCGCATTCCACTTCAACTTCACGGTTAACCAGAATT
TCCCGCATGATCCGCCGAAGGTCAAGTGCACGCAGAAGATCTACCATCCG
AATATTGATCTCGAGGGAAATGTGTGCTTGAATATTTTGAGGGAGGATTG
GAAGCCTGTCTTGAACCTGAATGCTGTTATTGTGGGGATGCAGAAACAAC
AACAGCAGCAAGCTGAAAATGCCGAAGGAGCTGCTGGTAAAAAGAAGAAG
AAGGTCACCGCCGCCCAGCTGCGCGTGCAACGAGATGTTGAAGATATGGT
CGATGTTCCTCTTCCTGGAACCGAATGCTTCCGATCCGCTGAACAAGGAG
GCCGCCGACGATCTGAGACAGAATCGGGAAGCGTTCAAGCGCAACGTCAG
GACGTCTATGGGTGGTGGTAGCGTGAGGGGGATACAGTATGAGCGGGTTA
TGCGGTGAACCTGCAAGAGCTCACCCTCGGAAGTACAATGAAAATGTCCT
TCCCGAACCCCGACGACATCTTGAACTTCACTCTTACTATCGAGCCGGAT
GAGGGCATGTACAAGGGCGGCGCATTCCACTTCAACTTCACGGTTAACCA
GAATTTCCCGCATGATCCGCCGAAGGTCAAGTGCACGCAGAAGATCTACC
ATCCGAATATTGATCTCGAGGGAAATGTGTGCTTGAATATTTTGAGGGAG
GATTGGAAGCCTGTCTTGAACCTGAATGCTGTTATTGTGGGGATGCAGAA
ACAACAACAGCAGCAAGCTGAAAATGCCGAAGGAGCTGCTGGTAAAAAGA
AGAAGAAGGTCACCGCCGCCCAGCTGCGCGTGCAACGAGATGTTGAAGAT
ATGGTCGATGTTCCTCTTCCTGGAACCGAATGCTTCCGATCCGCTGAACA
AGGAGGCCGCCGACGATCTGAGACAGAATCGGGAAGCGTTCAAGCGCAAC
GTCAGGACGTCTATGGGTGGTGGTAGCGTGAGGGGGATACAGTATGAGCG
GGTTATGCGGTGAACCTGCAAGAGCTCACCCTCGGAAGTACAATGAAAAT
GTCCTTCCCGAACCCCGACGACATCTTGAACTTCACTCTTACTATCGAGC
CGGATGAGGGCATGTACAAGGGCGGCGCATTCCACTTCAACTTCACGGTT
AACCAGAATTTCCCGCATGATCCGCCGAAGGTCAAGTGCACGCAGAAGAT
CTACCATCCGAATATTGATCTCGAGGGAAATGTGTGCTTGAATATTTTGA
GGGAGGATTGGAAGCCTGTCTTGAACCTGAATGCTGTTATTGTGGGGATG
CAGAAACAACAACAGCAGCAAGCTGAAAATGCCGAAGGAGCTGCTGGTAA
AAAGAAGAAGAAGGTCACCGCCGCCCAGCTGCGCGTGCAACGAGATGTTG
AAGATATGGTCGATGTTCCTCTTCCTGGAACCGAATGCTTCCGATCCGCT
GAACAAGGAGGCCGCCGACGATCTGAGACAGAATCGGGAAGCGTTCAAGC
GCAACGTCAGGACGTCTATGGGTGGTGGTAGCGTGAGGGGGATACAGTAT
GAGCGGGTTATGCGGTGAACCTGCAAGAGCTCACCCTCGGAAGTACAATG
AAAATGTCCTTCCCGAACCCCGACGACATCTTGAACTTCACTCTTACTAT
CGAGCCGGATGAGGGCATGTACAAGGGCGGCGCATTCCACTTCAACTTCA
CGGTTAACCAGAATTTCCCGCATGATCCGCCGAAGGTCAAGTGCACGCAG
AAGATCTACCATCCGAATATTGATCTCGAGGGAAATGTGTGCTTGAATAT
TTTGAGGGAGGATTGGAAGCCTGTCTTGAACCTGAATGCTGTTATTGTGG
GGATGCAGAAACAACAACAGCAGCAAGCTGAAAATGCCGAAGGAGCTGCT
GGTAAAAAGAAGAAGAAGGTCACCGCCGCCCAGCTGCGCGTGCAACGAGA
TGTTGAAGATATGGTCGATG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
UBC12CAN33_17660Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17660-T1CAN33_17660-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17660-T1.cdsCAN33_17660-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17660-T1.exon4CAN33_17660-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_17660-T1.exon3CAN33_17660-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_17660-T1.exon2CAN33_17660-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_17660-T1.exon1CAN33_17660-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09265FCK
DBxrefInterPro:IPR023313
DBxrefInterPro:IPR000608
DBxrefInterPro:IPR016135
DBxrefPFAM:PF00179
ProductNEDD8-conjugating protein ubc12
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:905288..906120 -
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