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CAN33_17845-T1, CAN33_17845-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_17845-T1
Unique NameCAN33_17845-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1025101..1025556-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_17845-T1 ID=CAN33_17845-T1|Name=CAN33_17845-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=456bp|location=Sequence derived from alignment at NKJJ01000011.1:1025101..1025556- (Aspergillus niger FDAARGOS_311)
ATGGAACAGCCACCCCCCGCCGATCAACCACAACAGCCTCCGCCTCCGAC
ACTCACAAATCCTCGCTTCACCCTCGAGCTAGAGTTTGTGTCTTCTCTCG
CCAATCCCTACTATCTGTCCCACCTCGCCGTGACATATCCGAACCTGCTG
GGCATAAACAAGTCTGGTGATGACAGCGACGTGAACAATGATTCCACAGA
CCCCGACGCGCAGGGATTTGCAGCGTACCTGGCCTACCTCTATTCCTACT
GGAAGACCCCCGAATACGCCCAGTTTCTGACCCATCCTGGTGCCACTTTG
CGGGCGCTACGACTACTGCAGGAGGAGACCTTCCGTCGCGACATTATTCG
TCCCGATGTCATTGAAAGGCTAGCAGGGACCGATATTGCCGCCGAACCCG
TCGACCCAGCTGCGGAGTCTGGAGACCAGGAGGGCGAGCAAGCCAAAGCA
AGCTAG
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Coding sequence (CDS) from alignment at NKJJ01000011.1:1025101..1025556-

>CAN33_17845-T1 ID=CAN33_17845-T1|Name=CAN33_17845-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=456bp|location=Sequence derived from alignment at NKJJ01000011.1:1025101..1025556- (Aspergillus niger FDAARGOS_311)
ATGGAACAGCCACCCCCCGCCGATCAACCACAACAGCCTCCGCCTCCGAC
ACTCACAAATCCTCGCTTCACCCTCGAGCTAGAGTTTGTGTCTTCTCTCG
CCAATCCCTACTATCTGTCCCACCTCGCCGTGACATATCCGAACCTGCTG
GGCATAAACAAGTCTGGTGATGACAGCGACGTGAACAATGATTCCACAGA
CCCCGACGCGCAGGGATTTGCAGCGTACCTGGCCTACCTCTATTCCTACT
GGAAGACCCCCGAATACGCCCAGTTTCTGACCCATCCTGGTGCCACTTTG
CGGGCGCTACGACTACTGCAGGAGGAGACCTTCCGTCGCGACATTATTCG
TCCCGATGTCATTGAAAGGCTAGCAGGGACCGATATTGCCGCCGAACCCG
TCGACCCAGCTGCGGAGTCTGGAGACCAGGAGGGCGAGCAAGCCAAAGCA
AGCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SOH1CAN33_17845Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17845-T1.cdsCAN33_17845-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17845-T1.exon1CAN33_17845-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17845-T1CAN33_17845-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265KF9
DBxrefInterPro:IPR008831
DBxrefInterPro:IPR038089
DBxrefPFAM:PF05669
Productsuppressor of hpr1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1025101..1025556 -
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