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CAN33_1785-T1, CAN33_1785-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_1785-T1
Unique NameCAN33_1785-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1095857..1096940-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_1785-T1 ID=CAN33_1785-T1|Name=CAN33_1785-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1084bp|location=Sequence derived from alignment at NKJJ01000004.1:1095857..1096940- (Aspergillus niger FDAARGOS_311)
ATGGCAGCCAAGTTTATCCCGCGCCAGGCTTTCCCCAACTATGGGTCCAT
CCCGAGGTCCTATTTCCTGGGCCACCATAGGGCCGGCCTGAAGAAGATGC
AGAACATGCTCTCTTCCATTGATTATGTAGTCGAGTGTCGAGATTACAGA
GTTCCTGTTACTTCTATCAACCCTATGTTCGAAGAAGCACTGGGAAAGAC
ACGGCGGTTGACCGTCTATACAAAGAGAGATCTGGGTGCTACAGCGGGAT
CGAATGCGCAGAAATTGGTGAGTGGAATACCACAAGTGAGAGGAATGCAC
TATGATAATGATAGTGCTAACATATAATATACATACTTAGGCAGAAAAAA
CCATTCGAACCTTCAATAAGAACGGCGCTACATTCTTCGTGAGCTCGTCC
TCTCGGGCAGATGTGGGCACAATCCTAAAACACCTGCGGGACGATGCAGA
AGGACCGGACAAGCTTGTTGGATGCCGGGTGATGATTGTTGGTATGCCTA
ATGTGGGCAAGTCGACGCTCATCAATCACCTGCGTAATCAGGGTGTTGGG
AAAGCTAAGGCGGTGCGGACCGGTGGCCAGCCAGGTATCACAAGAAAGAT
CGGGACACCCGTGAAGATCATCGAACGAGAAGGTGGCTCACATGTCTACG
TCTTGGATACCCCTGGAGTATTCATGCCATACGTGCCAGACGCGGAGAAC
ATGTTAAAGCTAGCCCTGTGCGGCTGCGTCAAGGACTCGGTCATTTCCCC
GGTCACGCTAGCCGACTACCTATTATATCACATCAACCTGAATGACGCCG
AGGTATATAAGCGATGGTCTGAGCCAACAAACGAGATTTTACCTCTGTTG
AACAACTTTGCCCGACATGCTGGTCTCTTGGCCAAGGGCGGAATTCCAAA
CACCGACCTGGCAGCACTACACTTCATACAAAAGTGGCGTGCCGGCGACC
TGGGCAGGTTTATGCTTGATGATCTGAAGGAGGAAGAGCGCCGTCTGCAA
GAAGGCGGAGAACGAGAGATACCCACCAGCTATACTCAGGCCTTGAAGGC
TGAGAAGCTGGGCAGAAAGCAACCCAAGCTGTAA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:1095857..1096940-

>CAN33_1785-T1 ID=CAN33_1785-T1|Name=CAN33_1785-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2022bp|location=Sequence derived from alignment at NKJJ01000004.1:1095857..1096940- (Aspergillus niger FDAARGOS_311)
GCAGAAAAAACCATTCGAACCTTCAATAAGAACGGCGCTACATTCTTCGT
GAGCTCGTCCTCTCGGGCAGATGTGGGCACAATCCTAAAACACCTGCGGG
ACGATGCAGAAGGACCGGACAAGCTTGTTGGATGCCGGGTGATGATTGTT
GGTATGCCTAATGTGGGCAAGTCGACGCTCATCAATCACCTGCGTAATCA
GGGTGTTGGGAAAGCTAAGGCGGTGCGGACCGGTGGCCAGCCAGGTATCA
CAAGAAAGATCGGGACACCCGTGAAGATCATCGAACGAGAAGGTGGCTCA
CATGTCTACGTCTTGGATACCCCTGGAGTATTCATGCCATACGTGCCAGA
CGCGGAGAACATGTTAAAGCTAGCCCTGTGCGGCTGCGTCAAGGACTCGG
TCATTTCCCCGGTCACGCTAGCCGACTACCTATTATATCACATCAACCTG
AATGACGCCGAGGTATATAAGCGATGGTCTGAGCCAACAAACGAGATTTT
ACCTCTGTTGAACAACTTTGCCCGACATGCTGGTCTCTTGGCCAAGGGCG
GAATTCCAAACACCGACCTGGCAGCACTACACTTCATACAAAAGTGGCGT
GCCGGCGACCTGGGCAGGTTTATGCTTGATGATCTGAAGGAGGAAGAGCG
CCGTCTGCAAGAAGGCGGAGAACGAGAGATACCCACCAGCTATACTCAGG
CCTTGAAGGCTGAGAAGCTGGGCAGAAAGCAACCCAAGCTGTAAATGGCA
GCCAAGTTTATCCCGCGCCAGGCTTTCCCCAACTATGGGTCCATCCCGAG
GTCCTATTTCCTGGGCCACCATAGGGCCGGCCTGAAGAAGATGCAGAACA
TGCTCTCTTCCATTGATTATGTAGTCGAGTGTCGAGATTACAGAGTTCCT
GTTACTTCTATCAACCCTATGTTCGAAGAAGCACTGGGAAAGACACGGCG
GTTGACCGTCTATACAAAGAGAGATCTGGGTGCTACAGCGGGATCGAATG
CGCAGAAATTGGCAGAAAAAACCATTCGAACCTTCAATAAGAACGGCGCT
ACATTCTTCGTGAGCTCGTCCTCTCGGGCAGATGTGGGCACAATCCTAAA
ACACCTGCGGGACGATGCAGAAGGACCGGACAAGCTTGTTGGATGCCGGG
TGATGATTGTTGGTATGCCTAATGTGGGCAAGTCGACGCTCATCAATCAC
CTGCGTAATCAGGGTGTTGGGAAAGCTAAGGCGGTGCGGACCGGTGGCCA
GCCAGGTATCACAAGAAAGATCGGGACACCCGTGAAGATCATCGAACGAG
AAGGTGGCTCACATGTCTACGTCTTGGATACCCCTGGAGTATTCATGCCA
TACGTGCCAGACGCGGAGAACATGTTAAAGCTAGCCCTGTGCGGCTGCGT
CAAGGACTCGGTCATTTCCCCGGTCACGCTAGCCGACTACCTATTATATC
ACATCAACCTGAATGACGCCGAGGTATATAAGCGATGGTCTGAGCCAACA
AACGAGATTTTACCTCTGTTGAACAACTTTGCCCGACATGCTGGTCTCTT
GGCCAAGGGCGGAATTCCAAACACCGACCTGGCAGCACTACACTTCATAC
AAAAGTGGCGTGCCGGCGACCTGGGCAGGTTTATGCTTGATGATCTGAAG
GAGGAAGAGCGCCGTCTGCAAGAAGGCGGAGAACGAGAGATACCCACCAG
CTATACTCAGGCCTTGAAGGCTGAGAAGCTGGGCAGAAAGCAACCCAAGC
TGTAAATGGCAGCCAAGTTTATCCCGCGCCAGGCTTTCCCCAACTATGGG
TCCATCCCGAGGTCCTATTTCCTGGGCCACCATAGGGCCGGCCTGAAGAA
GATGCAGAACATGCTCTCTTCCATTGATTATGTAGTCGAGTGTCGAGATT
ACAGAGTTCCTGTTACTTCTATCAACCCTATGTTCGAAGAAGCACTGGGA
AAGACACGGCGGTTGACCGTCTATACAAAGAGAGATCTGGGTGCTACAGC
GGGATCGAATGCGCAGAAATTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_1785CAN33_1785Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1785-T1CAN33_1785-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1785-T1.cdsCAN33_1785-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1785-T1.exon2CAN33_1785-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_1785-T1.exon1CAN33_1785-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09262WHU
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR016478
DBxrefInterPro:IPR006073
DBxrefInterPro:IPR023179
DBxrefPFAM:PF01926
Product50S ribosome-binding GTPase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1095857..1096940 -
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