|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:1037036..1038927+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_17860-T1 ID=CAN33_17860-T1|Name=CAN33_17860-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1892bp|location=Sequence derived from alignment at NKJJ01000011.1:1037036..1038927+ (Aspergillus niger FDAARGOS_311)
ATGGCCAACACCGAGTCGGGCGACTCAATCCTCAATGCCGGACAGGCACT
GAGCGGACAGACTACCGCAGGGCGCCGCGAGAGCTTCAGCTCTCAAAACT
CGCAGACGGCGAAGGAGTGAGTGCTCATTCATCTGGAACTCGCATGCACT
GGTATTCCATTGCAAATTTTGTTGCACAGGCAACTGACACCCATAGATTC
ATCGAATCCCAGATTCGACTTGAAGCCGATGCGCGTGAAGTCCTTCCATA
TGTAAGCTTACCTTTCTACTTATCGAAGAGAGAAAAGTGAAGAATCAGAA
ACACTAACACCTACGCAAGTCATTCGACACTTGTACACAAGACTTAGGTC
CCCTTCGCCAATCTCTTTTTGCCTGCCTCACCTGCAACCCCTCCACCTCC
GAAGAGTCATATACCCCCGCTGCCGTGTGCTACTCCTGCTCTATCTCCTG
CCATGGTGAACACGATCTCGTTGAACTATTCAACAAGCGGAACTTCGTCT
GCGACTGTGGAACAACCCGCATGCCCGCCACCTCCCCATGCACCCTTCGG
AATGATCCCAAGACCGGCGCGAAAGGCGTGCACTCAGAACAGCCTCACCA
AGGCAACAAATACAACCACAACTTCCAGAACAAGTTTTGCGGATGCGGCG
AGGACTATGACCCGCATAAGGAACGCGGTACGATGTTTCAATGTTTGGGT
CTGGGCACAGTAGAGACAGGTGGTTGTGGCGAAGACTGGTGGCATCCGGA
ATGCCTGATCGGATTGCCGCGCGACTGGTACAAGGGTGCAAAGAAAGATG
GAGCTGCCGATGGAGAGGCAGCCGACGAGGACGAGGAAGAAGAGACTCCT
CTCCCTCCCGGATTCCCCGCGGAAGAGGACTTTGCGATCTTCCTCTGCTA
CAAGTGCGTTGACTCGAATCCCTGGGTAAAGCGCTACGCAGGAACACCGG
GCTTCCTGCCTCCAGTATACAAAGAAGGCGGACTCGCCGAACCCTCAGAG
GAGGACACCAAACCTACCACTACAGAACAAACAACCCAGTCCACAGAACC
AGAGCAGCCCAGCAACCCCAAGAAACGCAAAGCCGACGACAGCGCCGACG
AAGAAGGCGATCCGGCTGCGAAACGACCAAAGGAGGAGCCTAAAGAGGAG
CCCAAACCCGATACGGACGACACTACTACTACCACCATCACCACCACCAC
TTCCGAATCTAAACCCACCACCACTCAAGATACCGACAAGCCCATCACCA
CCGAACCCTCCTTTACCTCCTCCAACCCATCCGCACCCAAACACACCCAC
CTCCCCACAACACCCCCAAGCCGCACCTTCTCCCTCTTCCTGAAAGACGA
CTTCCGCGACCACTTCTGCCGCTGCCGCGACTGCTACCCACACCTAGCAT
CGCATCCACAACTCCGCGAAGAAGAAGAGACCTATGAACCGCCCATGTCC
GAAGACGGCGACGGCGACGGCCCCAACGGCGGAGGCAGCACCGGCACGGG
CAGTCTTCTCGATCGGGGCGAAGCAGCGCTGAGCAACATCGACCGAGTGC
GCGCCATCGAGGGCGCAATGGTGTACAACCATCTGCGCGATAAGGTGAAG
GAGTTTCTGAAGCCGTTTGCGGAGACCGGGAAGGCGGTTAGTGCGGAGGA
TATCAAGTCTTATTTTGAGAAGTTGAGGGGTGATGAGCAGTCGATTCGGG
ATGCGGCGTCTTCTGCTGCTGGTGGGGGTGGGGGTGACGATGGTGATGGT
GGGGATGGAGGTAATCGGAGAGAACAGAGTGGTATGTAGATCTTTCCCCC
CTTCTGCGTTTGACTTGTTGGGGGGGGAGGGAATGGTTTGGTTGCTTTGG
ATGTGGATTTGCTAACTTGGGTGATTATTTTCAGGATATTGA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:1037036..1038927+ >CAN33_17860-T1 ID=CAN33_17860-T1|Name=CAN33_17860-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7410bp|location=Sequence derived from alignment at NKJJ01000011.1:1037036..1038927+ (Aspergillus niger FDAARGOS_311)
ATGGCCAACACCGAGTCGGGCGACTCAATCCTCAATGCCGGACAGGCACT
GAGCGGACAGACTACCGCAGGGCGCCGCGAGAGCTTCAGCTCTCAAAACT
CGCAGACGGCGAAGGAATTCATCGAATCCCAGATTCGACTTGAAGCCGAT
GCGCGTGAAGTCCTTCCATATTCATTCGACACTTGTACACAAGACTTAGG
TCCCCTTCGCCAATCTCTTTTTGCCTGCCTCACCTGCAACCCCTCCACCT
CCGAAGAGTCATATACCCCCGCTGCCGTGTGCTACTCCTGCTCTATCTCC
TGCCATGGTGAACACGATCTCGTTGAACTATTCAACAAGCGGAACTTCGT
CTGCGACTGTGGAACAACCCGCATGCCCGCCACCTCCCCATGCACCCTTC
GGAATGATCCCAAGACCGGCGCGAAAGGCGTGCACTCAGAACAGCCTCAC
CAAGGCAACAAATACAACCACAACTTCCAGAACAAGTTTTGCGGATGCGG
CGAGGACTATGACCCGCATAAGGAACGCGGTACGATGTTTCAATGTTTGG
GTCTGGGCACAGTAGAGACAGGTGGTTGTGGCGAAGACTGGTGGCATCCG
GAATGCCTGATCGGATTGCCGCGCGACTGGTACAAGGGTGCAAAGAAAGA
TGGAGCTGCCGATGGAGAGGCAGCCGACGAGGACGAGGAAGAAGAGACTC
CTCTCCCTCCCGGATTCCCCGCGGAAGAGGACTTTGCGATCTTCCTCTGC
TACAAGTGCGTTGACTCGAATCCCTGGGTAAAGCGCTACGCAGGAACACC
GGGCTTCCTGCCTCCAGTATACAAAGAAGGCGGACTCGCCGAACCCTCAG
AGGAGGACACCAAACCTACCACTACAGAACAAACAACCCAGTCCACAGAA
CCAGAGCAGCCCAGCAACCCCAAGAAACGCAAAGCCGACGACAGCGCCGA
CGAAGAAGGCGATCCGGCTGCGAAACGACCAAAGGAGGAGCCTAAAGAGG
AGCCCAAACCCGATACGGACGACACTACTACTACCACCATCACCACCACC
ACTTCCGAATCTAAACCCACCACCACTCAAGATACCGACAAGCCCATCAC
CACCGAACCCTCCTTTACCTCCTCCAACCCATCCGCACCCAAACACACCC
ACCTCCCCACAACACCCCCAAGCCGCACCTTCTCCCTCTTCCTGAAAGAC
GACTTCCGCGACCACTTCTGCCGCTGCCGCGACTGCTACCCACACCTAGC
ATCGCATCCACAACTCCGCGAAGAAGAAGAGACCTATGAACCGCCCATTC
TTCTCGATCGGGGCGAAGCAGCGCTGAGCAACATCGACCGAGTGCGCGCC
ATCGAGGGCGCAATGGTGTACAACCATCTGCGCGATAAGGTGAAGGAGTT
TCTGAAGCCGTTTGCGGAGACCGGGAAGGCGGTTAGTGCGGAGGATATCA
AGTCTTATTTTGAGAAGTTGAGGGGATATTGAATGGCCAACACCGAGTCG
GGCGACTCAATCCTCAATGCCGGACAGGCACTGAGCGGACAGACTACCGC
AGGGCGCCGCGAGAGCTTCAGCTCTCAAAACTCGCAGACGGCGAAGGAAT
TCATCGAATCCCAGATTCGACTTGAAGCCGATGCGCGTGAAGTCCTTCCA
TATTCATTCGACACTTGTACACAAGACTTAGGTCCCCTTCGCCAATCTCT
TTTTGCCTGCCTCACCTGCAACCCCTCCACCTCCGAAGAGTCATATACCC
CCGCTGCCGTGTGCTACTCCTGCTCTATCTCCTGCCATGGTGAACACGAT
CTCGTTGAACTATTCAACAAGCGGAACTTCGTCTGCGACTGTGGAACAAC
CCGCATGCCCGCCACCTCCCCATGCACCCTTCGGAATGATCCCAAGACCG
GCGCGAAAGGCGTGCACTCAGAACAGCCTCACCAAGGCAACAAATACAAC
CACAACTTCCAGAACAAGTTTTGCGGATGCGGCGAGGACTATGACCCGCA
TAAGGAACGCGGTACGATGTTTCAATGTTTGGGTCTGGGCACAGTAGAGA
CAGGTGGTTGTGGCGAAGACTGGTGGCATCCGGAATGCCTGATCGGATTG
CCGCGCGACTGGTACAAGGGTGCAAAGAAAGATGGAGCTGCCGATGGAGA
GGCAGCCGACGAGGACGAGGAAGAAGAGACTCCTCTCCCTCCCGGATTCC
CCGCGGAAGAGGACTTTGCGATCTTCCTCTGCTACAAGTGCGTTGACTCG
AATCCCTGGGTAAAGCGCTACGCAGGAACACCGGGCTTCCTGCCTCCAGT
ATACAAAGAAGGCGGACTCGCCGAACCCTCAGAGGAGGACACCAAACCTA
CCACTACAGAACAAACAACCCAGTCCACAGAACCAGAGCAGCCCAGCAAC
CCCAAGAAACGCAAAGCCGACGACAGCGCCGACGAAGAAGGCGATCCGGC
TGCGAAACGACCAAAGGAGGAGCCTAAAGAGGAGCCCAAACCCGATACGG
ACGACACTACTACTACCACCATCACCACCACCACTTCCGAATCTAAACCC
ACCACCACTCAAGATACCGACAAGCCCATCACCACCGAACCCTCCTTTAC
CTCCTCCAACCCATCCGCACCCAAACACACCCACCTCCCCACAACACCCC
CAAGCCGCACCTTCTCCCTCTTCCTGAAAGACGACTTCCGCGACCACTTC
TGCCGCTGCCGCGACTGCTACCCACACCTAGCATCGCATCCACAACTCCG
CGAAGAAGAAGAGACCTATGAACCGCCCATTCTTCTCGATCGGGGCGAAG
CAGCGCTGAGCAACATCGACCGAGTGCGCGCCATCGAGGGCGCAATGGTG
TACAACCATCTGCGCGATAAGGTGAAGGAGTTTCTGAAGCCGTTTGCGGA
GACCGGGAAGGCGGTTAGTGCGGAGGATATCAAGTCTTATTTTGAGAAGT
TGAGGGGATATTGAATGGCCAACACCGAGTCGGGCGACTCAATCCTCAAT
GCCGGACAGGCACTGAGCGGACAGACTACCGCAGGGCGCCGCGAGAGCTT
CAGCTCTCAAAACTCGCAGACGGCGAAGGAATTCATCGAATCCCAGATTC
GACTTGAAGCCGATGCGCGTGAAGTCCTTCCATATTCATTCGACACTTGT
ACACAAGACTTAGGTCCCCTTCGCCAATCTCTTTTTGCCTGCCTCACCTG
CAACCCCTCCACCTCCGAAGAGTCATATACCCCCGCTGCCGTGTGCTACT
CCTGCTCTATCTCCTGCCATGGTGAACACGATCTCGTTGAACTATTCAAC
AAGCGGAACTTCGTCTGCGACTGTGGAACAACCCGCATGCCCGCCACCTC
CCCATGCACCCTTCGGAATGATCCCAAGACCGGCGCGAAAGGCGTGCACT
CAGAACAGCCTCACCAAGGCAACAAATACAACCACAACTTCCAGAACAAG
TTTTGCGGATGCGGCGAGGACTATGACCCGCATAAGGAACGCGGTACGAT
GTTTCAATGTTTGGGTCTGGGCACAGTAGAGACAGGTGGTTGTGGCGAAG
ACTGGTGGCATCCGGAATGCCTGATCGGATTGCCGCGCGACTGGTACAAG
GGTGCAAAGAAAGATGGAGCTGCCGATGGAGAGGCAGCCGACGAGGACGA
GGAAGAAGAGACTCCTCTCCCTCCCGGATTCCCCGCGGAAGAGGACTTTG
CGATCTTCCTCTGCTACAAGTGCGTTGACTCGAATCCCTGGGTAAAGCGC
TACGCAGGAACACCGGGCTTCCTGCCTCCAGTATACAAAGAAGGCGGACT
CGCCGAACCCTCAGAGGAGGACACCAAACCTACCACTACAGAACAAACAA
CCCAGTCCACAGAACCAGAGCAGCCCAGCAACCCCAAGAAACGCAAAGCC
GACGACAGCGCCGACGAAGAAGGCGATCCGGCTGCGAAACGACCAAAGGA
GGAGCCTAAAGAGGAGCCCAAACCCGATACGGACGACACTACTACTACCA
CCATCACCACCACCACTTCCGAATCTAAACCCACCACCACTCAAGATACC
GACAAGCCCATCACCACCGAACCCTCCTTTACCTCCTCCAACCCATCCGC
ACCCAAACACACCCACCTCCCCACAACACCCCCAAGCCGCACCTTCTCCC
TCTTCCTGAAAGACGACTTCCGCGACCACTTCTGCCGCTGCCGCGACTGC
TACCCACACCTAGCATCGCATCCACAACTCCGCGAAGAAGAAGAGACCTA
TGAACCGCCCATTCTTCTCGATCGGGGCGAAGCAGCGCTGAGCAACATCG
ACCGAGTGCGCGCCATCGAGGGCGCAATGGTGTACAACCATCTGCGCGAT
AAGGTGAAGGAGTTTCTGAAGCCGTTTGCGGAGACCGGGAAGGCGGTTAG
TGCGGAGGATATCAAGTCTTATTTTGAGAAGTTGAGGGGATATTGAATGG
CCAACACCGAGTCGGGCGACTCAATCCTCAATGCCGGACAGGCACTGAGC
GGACAGACTACCGCAGGGCGCCGCGAGAGCTTCAGCTCTCAAAACTCGCA
GACGGCGAAGGAATTCATCGAATCCCAGATTCGACTTGAAGCCGATGCGC
GTGAAGTCCTTCCATATTCATTCGACACTTGTACACAAGACTTAGGTCCC
CTTCGCCAATCTCTTTTTGCCTGCCTCACCTGCAACCCCTCCACCTCCGA
AGAGTCATATACCCCCGCTGCCGTGTGCTACTCCTGCTCTATCTCCTGCC
ATGGTGAACACGATCTCGTTGAACTATTCAACAAGCGGAACTTCGTCTGC
GACTGTGGAACAACCCGCATGCCCGCCACCTCCCCATGCACCCTTCGGAA
TGATCCCAAGACCGGCGCGAAAGGCGTGCACTCAGAACAGCCTCACCAAG
GCAACAAATACAACCACAACTTCCAGAACAAGTTTTGCGGATGCGGCGAG
GACTATGACCCGCATAAGGAACGCGGTACGATGTTTCAATGTTTGGGTCT
GGGCACAGTAGAGACAGGTGGTTGTGGCGAAGACTGGTGGCATCCGGAAT
GCCTGATCGGATTGCCGCGCGACTGGTACAAGGGTGCAAAGAAAGATGGA
GCTGCCGATGGAGAGGCAGCCGACGAGGACGAGGAAGAAGAGACTCCTCT
CCCTCCCGGATTCCCCGCGGAAGAGGACTTTGCGATCTTCCTCTGCTACA
AGTGCGTTGACTCGAATCCCTGGGTAAAGCGCTACGCAGGAACACCGGGC
TTCCTGCCTCCAGTATACAAAGAAGGCGGACTCGCCGAACCCTCAGAGGA
GGACACCAAACCTACCACTACAGAACAAACAACCCAGTCCACAGAACCAG
AGCAGCCCAGCAACCCCAAGAAACGCAAAGCCGACGACAGCGCCGACGAA
GAAGGCGATCCGGCTGCGAAACGACCAAAGGAGGAGCCTAAAGAGGAGCC
CAAACCCGATACGGACGACACTACTACTACCACCATCACCACCACCACTT
CCGAATCTAAACCCACCACCACTCAAGATACCGACAAGCCCATCACCACC
GAACCCTCCTTTACCTCCTCCAACCCATCCGCACCCAAACACACCCACCT
CCCCACAACACCCCCAAGCCGCACCTTCTCCCTCTTCCTGAAAGACGACT
TCCGCGACCACTTCTGCCGCTGCCGCGACTGCTACCCACACCTAGCATCG
CATCCACAACTCCGCGAAGAAGAAGAGACCTATGAACCGCCCATTCTTCT
CGATCGGGGCGAAGCAGCGCTGAGCAACATCGACCGAGTGCGCGCCATCG
AGGGCGCAATGGTGTACAACCATCTGCGCGATAAGGTGAAGGAGTTTCTG
AAGCCGTTTGCGGAGACCGGGAAGGCGGTTAGTGCGGAGGATATCAAGTC
TTATTTTGAGAAGTTGAGGGGATATTGAATGGCCAACACCGAGTCGGGCG
ACTCAATCCTCAATGCCGGACAGGCACTGAGCGGACAGACTACCGCAGGG
CGCCGCGAGAGCTTCAGCTCTCAAAACTCGCAGACGGCGAAGGAATTCAT
CGAATCCCAGATTCGACTTGAAGCCGATGCGCGTGAAGTCCTTCCATATT
CATTCGACACTTGTACACAAGACTTAGGTCCCCTTCGCCAATCTCTTTTT
GCCTGCCTCACCTGCAACCCCTCCACCTCCGAAGAGTCATATACCCCCGC
TGCCGTGTGCTACTCCTGCTCTATCTCCTGCCATGGTGAACACGATCTCG
TTGAACTATTCAACAAGCGGAACTTCGTCTGCGACTGTGGAACAACCCGC
ATGCCCGCCACCTCCCCATGCACCCTTCGGAATGATCCCAAGACCGGCGC
GAAAGGCGTGCACTCAGAACAGCCTCACCAAGGCAACAAATACAACCACA
ACTTCCAGAACAAGTTTTGCGGATGCGGCGAGGACTATGACCCGCATAAG
GAACGCGGTACGATGTTTCAATGTTTGGGTCTGGGCACAGTAGAGACAGG
TGGTTGTGGCGAAGACTGGTGGCATCCGGAATGCCTGATCGGATTGCCGC
GCGACTGGTACAAGGGTGCAAAGAAAGATGGAGCTGCCGATGGAGAGGCA
GCCGACGAGGACGAGGAAGAAGAGACTCCTCTCCCTCCCGGATTCCCCGC
GGAAGAGGACTTTGCGATCTTCCTCTGCTACAAGTGCGTTGACTCGAATC
CCTGGGTAAAGCGCTACGCAGGAACACCGGGCTTCCTGCCTCCAGTATAC
AAAGAAGGCGGACTCGCCGAACCCTCAGAGGAGGACACCAAACCTACCAC
TACAGAACAAACAACCCAGTCCACAGAACCAGAGCAGCCCAGCAACCCCA
AGAAACGCAAAGCCGACGACAGCGCCGACGAAGAAGGCGATCCGGCTGCG
AAACGACCAAAGGAGGAGCCTAAAGAGGAGCCCAAACCCGATACGGACGA
CACTACTACTACCACCATCACCACCACCACTTCCGAATCTAAACCCACCA
CCACTCAAGATACCGACAAGCCCATCACCACCGAACCCTCCTTTACCTCC
TCCAACCCATCCGCACCCAAACACACCCACCTCCCCACAACACCCCCAAG
CCGCACCTTCTCCCTCTTCCTGAAAGACGACTTCCGCGACCACTTCTGCC
GCTGCCGCGACTGCTACCCACACCTAGCATCGCATCCACAACTCCGCGAA
GAAGAAGAGACCTATGAACCGCCCATTCTTCTCGATCGGGGCGAAGCAGC
GCTGAGCAACATCGACCGAGTGCGCGCCATCGAGGGCGCAATGGTGTACA
ACCATCTGCGCGATAAGGTGAAGGAGTTTCTGAAGCCGTTTGCGGAGACC
GGGAAGGCGGTTAGTGCGGAGGATATCAAGTCTTATTTTGAGAAGTTGAG
GGGATATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262E7W |
| DBxref | InterPro:IPR003126 |
| DBxref | PFAM:PF02207 |
| Product | putative zinc finger in N-recognin (UBR box) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:1037036..1038927 + |
|
