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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:1042728..1043708+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_17875-T1 ID=CAN33_17875-T1|Name=CAN33_17875-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=981bp|location=Sequence derived from alignment at NKJJ01000011.1:1042728..1043708+ (Aspergillus niger FDAARGOS_311)
ATGACCAACGTCGGCATCCTGTTGACCCAGTCCCTCGGATACTTCCTAAG
CGAGGGCAGCAAATGGCGAGTGATTCTCGCCATTGCCGGCTTCATCGGAG
CCCTCCAGCTCCTCGGTCTCACCCTAGTTCCAGAAAGCCCCACCTGGCTC
GCCGAGCACCAAAAGAGCAGTCTAGCCAGACAAGTCCTGCAACGGCTCCG
CGGAAAGGACGCAGACATCGAAGAGGAAATCGAAGGATGGCCATCCTCAA
CAGGCCGACCAACAGATGGTTCCGGCGAAGAGCAATCACTCCTCACGCCA
CCATCCGGCAACATGCCACCCAAACAGCCCCCCGTCACGATCTTCCACGC
CATCACTAACCCATCCTACCGACCAGCCATCATCGCCGTCGTCGGCGTAA
TGGTCGCTCAACAATTCACCGGCATCAACAGCATCATCATGTACAGTGTC
TCCCTATTACAAACCATCCTCCCCACCACCGCCGCCCTCCTAACCGTAAT
CATCTCCGCCATCAACCTCATCATCACACTCGCCTGCTCCCCGCTCCCAG
ACAAAATCGGCCGTAGATCCTGCCTTCTCCTCAGCATCAGCGGCATGGGA
TTCAATTCCATTCTCCTAGCCCTAGGCATCTACTTCAACCAGAAGGTCCT
CTCCGCCATCGCCGTCCTTCTCTTCGTCTCCTGCTTCGCCGTCGGCCTAG
GCCCCGTTCCGTTCATCCTTGCCTCGGAGCTCGTCGGTCCTGAAGCCGTC
GGCGCCACGCAAAGCTGCGCTCTAGCTGCCAACTGGATCGCCACTTTCGT
GGTGGCGCAATTCTTCCCCATGTTGAATGATGCTCTTGGCGGCCGTGGCA
AGATTTACTGGGTTTTCACCGGCATGGCTTGTCTTCTTGGTGGGTTTATC
TATTGGCGTGTTCCGGAGACGAAGGGGAAGACTAGTGCAGATGAGGTCTG
GGGGAGAGATCATCGTCGACGACGGGATTGA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:1042728..1043708+ >CAN33_17875-T1 ID=CAN33_17875-T1|Name=CAN33_17875-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=981bp|location=Sequence derived from alignment at NKJJ01000011.1:1042728..1043708+ (Aspergillus niger FDAARGOS_311)
ATGACCAACGTCGGCATCCTGTTGACCCAGTCCCTCGGATACTTCCTAAG
CGAGGGCAGCAAATGGCGAGTGATTCTCGCCATTGCCGGCTTCATCGGAG
CCCTCCAGCTCCTCGGTCTCACCCTAGTTCCAGAAAGCCCCACCTGGCTC
GCCGAGCACCAAAAGAGCAGTCTAGCCAGACAAGTCCTGCAACGGCTCCG
CGGAAAGGACGCAGACATCGAAGAGGAAATCGAAGGATGGCCATCCTCAA
CAGGCCGACCAACAGATGGTTCCGGCGAAGAGCAATCACTCCTCACGCCA
CCATCCGGCAACATGCCACCCAAACAGCCCCCCGTCACGATCTTCCACGC
CATCACTAACCCATCCTACCGACCAGCCATCATCGCCGTCGTCGGCGTAA
TGGTCGCTCAACAATTCACCGGCATCAACAGCATCATCATGTACAGTGTC
TCCCTATTACAAACCATCCTCCCCACCACCGCCGCCCTCCTAACCGTAAT
CATCTCCGCCATCAACCTCATCATCACACTCGCCTGCTCCCCGCTCCCAG
ACAAAATCGGCCGTAGATCCTGCCTTCTCCTCAGCATCAGCGGCATGGGA
TTCAATTCCATTCTCCTAGCCCTAGGCATCTACTTCAACCAGAAGGTCCT
CTCCGCCATCGCCGTCCTTCTCTTCGTCTCCTGCTTCGCCGTCGGCCTAG
GCCCCGTTCCGTTCATCCTTGCCTCGGAGCTCGTCGGTCCTGAAGCCGTC
GGCGCCACGCAAAGCTGCGCTCTAGCTGCCAACTGGATCGCCACTTTCGT
GGTGGCGCAATTCTTCCCCATGTTGAATGATGCTCTTGGCGGCCGTGGCA
AGATTTACTGGGTTTTCACCGGCATGGCTTGTCTTCTTGGTGGGTTTATC
TATTGGCGTGTTCCGGAGACGAAGGGGAAGACTAGTGCAGATGAGGTCTG
GGGGAGAGATCATCGTCGACGACGGGATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005828 |
| DBxref | InterPro:IPR003663 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | Sugar (and other) transporter family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:1042728..1043708 + |
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