You are here

Home

CAN33_17970-T1, CAN33_17970-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_17970-T1
Unique NameCAN33_17970-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1108655..1110400-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_17970-T1 ID=CAN33_17970-T1|Name=CAN33_17970-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1746bp|location=Sequence derived from alignment at NKJJ01000011.1:1108655..1110400- (Aspergillus niger FDAARGOS_311)
ATGGAATCCGAGAAGAAGCGCCGTGCGAGCAAACCTAAAGTCAAAACAGG
CTGTCGGACATGCAAGTGAGTTGGGCGGCTGCCTTGTTACACAAGTTGGT
GTGGTGCTTATTCTATACACAGAATTCGTCGAGTCAAATGCGACGAGGGT
CGACCGGCTTGCAAGAGATGCGTATCAACTGGCCGAGTCTGCGATGGCTA
TGGGGTTTGGAGTGAAGCGAAAAAGCCCACCGTCGACGGCAATACTGGCG
CACCAAGAGCCTTCCAGAGTCTGCTGTCTAGTTACAATGCACCGGTCCCA
ATTCCTCATGCCGCATGTGCTGAGCGGAAATATGTGGAATGGTTCATCCA
GTGTACCATTTTCAAAATTGGAGGAGTGTTTTCTTCCCAATTCTGGGGCA
GAACCGTTGTTCAAGCACTTTCTCAAGAGCTAGCAGTACGGCATGCTGTT
TTGGCATTGGCCTCTACGCATAAATATAGGACTCAGAGGAGTGTTAGAGG
TACTGCAACGGCAGGTCATCTAAGCGAGCATGAGAAATTCACTCTCCAGC
ACTACAACAAAGCGATTGGCTGTCTCCAAGCTGAAATAAGACGCAACAAT
AAACGAACGCAGAGTATGATAGTTGCCCTCATTACTTGCATGGTTTTCGT
GACTCTCGAAATGATGCGAGGCCAATACCGAACAAGTCATACTCATCTAC
AGCACGGGCTGAAGCTGGTGAAGGAGATTCAGAGGCTCTCCGGAGCCCCT
AAGACCGGAAGAATTCGGATAAGGACTTCGTCACAAACAAATGAGGATGA
TGTTATCGAGGTCTTTAGCAGACTGGAAGTGCACTATGCTCTACTTGGAC
ATGGGACGAAGTACTCGAACCTTGACTATGACGTTCAACCTCGTCACTTA
CCGTACAGATTTCCATCAATTGAACAAGCAAGGCAATATCTGGATGTTCT
GCTGGCAAGAGCACAGGGTCTGGTGGAAATGGGGCGTCACATCGAGACGG
ACATGTTTGTTGCGACTCAGGGCTACCAGCAGTTTCTCGAGTCTCAATGG
CACCTGGAAAAGGACTTGGAAGTATGGCTTGATGTTTATCGATCGTCACT
TGGTAAATTCTCAGCTCAAGATCTCATTCAGAATACCTTGGCTAGGGGGT
TACTCGGGATGTACCATGCCATGGCCTTGATCATGGTCACGACCTGCATC
CCATGGGACGACGAAACGGCATTTGACCTACAAACCGACGGGTTCATGTC
GATTATTCGTGAGGCAATCGGCATCTGTCAAGCCCTCAAAATCGCATATC
CAGATTTCCCCACGAGTGGATCTCTCAATTGCCCGTTGGGAATGGCTTTT
ACGATGGACATTGGCTTCATCCAGCCATTATATTATACCGCAATTAAGTG
CCGGATTCCTCAGATCCGACGACACGCGATCGAATTGCTTCGATTGGCAC
CGCACCGTGAAGGCATATGGAATGGCATTCTTACTGCTAGGATTGCGGAG
GAGGTAGTTGCTTATGAAGAGTGGACTATCGATGCAAGCCTTACTCTGGC
AAAGAGCTCAGATCTCCTCAGCTTGCCAGAGGCGGGTGATTCACTTACAG
TCTTGCCTTATCTGTGCCGAATCTCAGATGTTCGAGTCGAATTGCCCGAT
GAAAACACAGGAGAGGCTACCGTGGCTTTCTGGCAGCGCGAAGACGGTAG
AAGCTGGAAGGTTGATGAGAGAAAATTCCAGACGGAGGATCCATAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000011.1:1108655..1110400-

>CAN33_17970-T1 ID=CAN33_17970-T1|Name=CAN33_17970-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3378bp|location=Sequence derived from alignment at NKJJ01000011.1:1108655..1110400- (Aspergillus niger FDAARGOS_311)
AATTCGTCGAGTCAAATGCGACGAGGGTCGACCGGCTTGCAAGAGATGCG
TATCAACTGGCCGAGTCTGCGATGGCTATGGGGTTTGGAGTGAAGCGAAA
AAGCCCACCGTCGACGGCAATACTGGCGCACCAAGAGCCTTCCAGAGTCT
GCTGTCTAGTTACAATGCACCGGTCCCAATTCCTCATGCCGCATGTGCTG
AGCGGAAATATGTGGAATGGTTCATCCAGTGTACCATTTTCAAAATTGGA
GGAGTGTTTTCTTCCCAATTCTGGGGCAGAACCGTTGTTCAAGCACTTTC
TCAAGAGCTAGCAGTACGGCATGCTGTTTTGGCATTGGCCTCTACGCATA
AATATAGGACTCAGAGGAGTGTTAGAGGTACTGCAACGGCAGGTCATCTA
AGCGAGCATGAGAAATTCACTCTCCAGCACTACAACAAAGCGATTGGCTG
TCTCCAAGCTGAAATAAGACGCAACAATAAACGAACGCAGAGTATGATAG
TTGCCCTCATTACTTGCATGGTTTTCGTGACTCTCGAAATGATGCGAGGC
CAATACCGAACAAGTCATACTCATCTACAGCACGGGCTGAAGCTGGTGAA
GGAGATTCAGAGGCTCTCCGGAGCCCCTAAGACCGGAAGAATTCGGATAA
GGACTTCGTCACAAACAAATGAGGATGATGTTATCGAGGTCTTTAGCAGA
CTGGAAGTGCACTATGCTCTACTTGGACATGGGACGAAGTACTCGAACCT
TGACTATGACGTTCAACCTCGTCACTTACCGTACAGATTTCCATCAATTG
AACAAGCAAGGCAATATCTGGATGTTCTGCTGGCAAGAGCACAGGGTCTG
GTGGAAATGGGGCGTCACATCGAGACGGACATGTTTGTTGCGACTCAGGG
CTACCAGCAGTTTCTCGAGTCTCAATGGCACCTGGAAAAGGACTTGGAAG
TATGGCTTGATGTTTATCGATCGTCACTTGGTAAATTCTCAGCTCAAGAT
CTCATTCAGAATACCTTGGCTAGGGGGTTACTCGGGATGTACCATGCCAT
GGCCTTGATCATGGTCACGACCTGCATCCCATGGGACGACGAAACGGCAT
TTGACCTACAAACCGACGGGTTCATGTCGATTATTCGTGAGGCAATCGGC
ATCTGTCAAGCCCTCAAAATCGCATATCCAGATTTCCCCACGAGTGGATC
TCTCAATTGCCCGTTGGGAATGGCTTTTACGATGGACATTGGCTTCATCC
AGCCATTATATTATACCGCAATTAAGTGCCGGATTCCTCAGATCCGACGA
CACGCGATCGAATTGCTTCGATTGGCACCGCACCGTGAAGGCATATGGAA
TGGCATTCTTACTGCTAGGATTGCGGAGGAGGTAGTTGCTTATGAAGAGT
GGACTATCGATGCAAGCCTTACTCTGGCAAAGAGCTCAGATCTCCTCAGC
TTGCCAGAGGCGGGTGATTCACTTACAGTCTTGCCTTATCTGTGCCGAAT
CTCAGATGTTCGAGTCGAATTGCCCGATGAAAACACAGGAGAGGCTACCG
TGGCTTTCTGGCAGCGCGAAGACGGTAGAAGCTGGAAGGTTGATGAGAGA
AAATTCCAGACGGAGGATCCATAAATGGAATCCGAGAAGAAGCGCCGTGC
GAGCAAACCTAAAGTCAAAACAGGCTGTCGGACATGCAAAATTCGTCGAG
TCAAATGCGACGAGGGTCGACCGGCTTGCAAGAGATGCGTATCAACTGGC
CGAGTCTGCGATGGCTATGGGGTTTGGAGTGAAGCGAAAAAGCCCACCGT
CGACGGCAATACTGGCGCACCAAGAGCCTTCCAGAGTCTGCTGTCTAGTT
ACAATGCACCGGTCCCAATTCCTCATGCCGCATGTGCTGAGCGGAAATAT
GTGGAATGGTTCATCCAGTGTACCATTTTCAAAATTGGAGGAGTGTTTTC
TTCCCAATTCTGGGGCAGAACCGTTGTTCAAGCACTTTCTCAAGAGCTAG
CAGTACGGCATGCTGTTTTGGCATTGGCCTCTACGCATAAATATAGGACT
CAGAGGAGTGTTAGAGGTACTGCAACGGCAGGTCATCTAAGCGAGCATGA
GAAATTCACTCTCCAGCACTACAACAAAGCGATTGGCTGTCTCCAAGCTG
AAATAAGACGCAACAATAAACGAACGCAGAGTATGATAGTTGCCCTCATT
ACTTGCATGGTTTTCGTGACTCTCGAAATGATGCGAGGCCAATACCGAAC
AAGTCATACTCATCTACAGCACGGGCTGAAGCTGGTGAAGGAGATTCAGA
GGCTCTCCGGAGCCCCTAAGACCGGAAGAATTCGGATAAGGACTTCGTCA
CAAACAAATGAGGATGATGTTATCGAGGTCTTTAGCAGACTGGAAGTGCA
CTATGCTCTACTTGGACATGGGACGAAGTACTCGAACCTTGACTATGACG
TTCAACCTCGTCACTTACCGTACAGATTTCCATCAATTGAACAAGCAAGG
CAATATCTGGATGTTCTGCTGGCAAGAGCACAGGGTCTGGTGGAAATGGG
GCGTCACATCGAGACGGACATGTTTGTTGCGACTCAGGGCTACCAGCAGT
TTCTCGAGTCTCAATGGCACCTGGAAAAGGACTTGGAAGTATGGCTTGAT
GTTTATCGATCGTCACTTGGTAAATTCTCAGCTCAAGATCTCATTCAGAA
TACCTTGGCTAGGGGGTTACTCGGGATGTACCATGCCATGGCCTTGATCA
TGGTCACGACCTGCATCCCATGGGACGACGAAACGGCATTTGACCTACAA
ACCGACGGGTTCATGTCGATTATTCGTGAGGCAATCGGCATCTGTCAAGC
CCTCAAAATCGCATATCCAGATTTCCCCACGAGTGGATCTCTCAATTGCC
CGTTGGGAATGGCTTTTACGATGGACATTGGCTTCATCCAGCCATTATAT
TATACCGCAATTAAGTGCCGGATTCCTCAGATCCGACGACACGCGATCGA
ATTGCTTCGATTGGCACCGCACCGTGAAGGCATATGGAATGGCATTCTTA
CTGCTAGGATTGCGGAGGAGGTAGTTGCTTATGAAGAGTGGACTATCGAT
GCAAGCCTTACTCTGGCAAAGAGCTCAGATCTCCTCAGCTTGCCAGAGGC
GGGTGATTCACTTACAGTCTTGCCTTATCTGTGCCGAATCTCAGATGTTC
GAGTCGAATTGCCCGATGAAAACACAGGAGAGGCTACCGTGGCTTTCTGG
CAGCGCGAAGACGGTAGAAGCTGGAAGGTTGATGAGAGAAAATTCCAGAC
GGAGGATCCATAAATGGAATCCGAGAAGAAGCGCCGTGCGAGCAAACCTA
AAGTCAAAACAGGCTGTCGGACATGCAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_17970CAN33_17970Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17970-T1CAN33_17970-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17970-T1.cdsCAN33_17970-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_17970-T1.exon2CAN33_17970-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_17970-T1.exon1CAN33_17970-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
ProductFungal specific transcription factor domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1108655..1110400 -
Powered by Drupal