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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:1138850..1139887+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_18020-T1 ID=CAN33_18020-T1|Name=CAN33_18020-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1038bp|location=Sequence derived from alignment at NKJJ01000011.1:1138850..1139887+ (Aspergillus niger FDAARGOS_311)
ATGGATTCGGCCCTCGAATCCCTGCAGAATACCGATCTAGCGGAAGAAAT
TGAAGCCATCAATGCCATCTACGAACCGGACACCCTTACCATCACTAACA
CCTCTGCCTCGACCGGCCCCTCAACTCTCGACCTCGGCGGCTCCGGCTCT
TCAGACTCTTCTCCTCCTTCAACAACAATAAAGCTCCAACTCCCAGAACA
CCCTCACTTGTCCTTCCTCCTCGGATTCAACTCAACATATCCCGACACCC
CGCCCAAAATCCTAGGAACAGCATCCACAGCCTCACGAGGAGAGGGCAAG
CTCGCCGTCGATGTACTAGAGGACATTCTCAGCCGCACATACCAGCCGGG
CGCGGTATGTCTATTCGACCTGATCAATGAAGCCGTCCAGGCATTCACGG
AGCTCAATATCGGCGGCAGCGCTACAACAACCACCACCACCAACAACAAT
GACACAACTTCCCACACCCAACCTGCCTCCGAAGAACTCAACACCGAAAA
CGGCAGCCATCAACCGCTAACCACAAGATCAACAACCCCCGACCATCACA
CATTTAACCTCACTAGCCCACCGCCATGGATCCTTTCCGACGTCATCACG
GAAAAGAAATCCGTCTTCGTCGGGCGCGCAGCCCACGTCACGAGTCTGGA
CCAGGCAAAGGCGTTCCTGGATCATCTGCTCGCGACGGAGAAAAAGGTTG
CGTCCGCGACGCATAATATCAGTGCATGGAGGATTCGCGAGGTGAAATCA
TCTACTTCTACTGCTGGCGGTAGTAAGAATGGAGAAGCTACAGAGATGAT
TGTGCAGGATTGTGATGATGATGGGGAGACGGCTGCTGGAGGTCGACTAC
TGCATTTGATGCAGTTGATGGATGTTTGGGATGTGGTGGTTGTGGTGACA
AGATGGTATGGCGGTGTGTTGCTGGGGCCGGATCGGTTTCGCATTATCAA
TGCGGCCGGGAGGGATGCGCTGGTCAAGGGGGGTTTTGTTAAAGAGAAGA
TGTCTGGAGAGAAGGGGAAGAAGAAGGGAAAGAAATGA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:1138850..1139887+ >CAN33_18020-T1 ID=CAN33_18020-T1|Name=CAN33_18020-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1572bp|location=Sequence derived from alignment at NKJJ01000011.1:1138850..1139887+ (Aspergillus niger FDAARGOS_311)
ATGGATTCGGCCCTCGAATCCCTGCAGAATACCGATCTAGCGGAAGAAAT
TGAAGCCATCAATGCCATCTACGAACCGGACACCCTTACCATCACTAACA
CCTCTGCCTCGACCGGCCCCTCAACTCTCGACCTCGGCGGCTCCGGCTCT
TCAGACTCTTCTCCTCCTTCAACAACAATAAAGCTCCAACTCCCAGAACA
CCCTCACTTGTCCTTCCTCCTCGGATTCAACTCAACATATCCCGACACCC
CGCCCAAAATCCTAGGAACAGCATCCACAGCCTCACGAGGAGAGGGCAAG
CTCGCCGTCGATGTACTAGAGGACATTCTCAGCCGCACATACCAGCCGGG
CGCGAAATCCGTCTTCGTCGGGCGCGCAGCCCACGTCACGAGTCTGGACC
AGGCAAAGGCGTTCCTGGATCATCTGCTCGCGACGGAGAAAAAGGTTGCG
TCCGCGACGCATAATATCAGTGCATGGAGGATTCGCGAGGTGAAATCATC
TACTTCTACTGCTGGCGGTAGTAAGAATGGAGAAGCTACAGAGATGATTG
TGCAGGATTGTGATGATGATGGGGAGACGGCTGCTGGAGGTCGACTACTG
CATTTGATGCAGTTGATGGATGTTTGGGATGTGGTGGTTGTGGTGACAAG
ATGGTATGGCGGTGTGTTGCTGGGGCCGGATCGGTTTCGCATTATCAATG
CGGCCGGGAGGGATGCGCTGGTCAAGGGGGGTTTTGTTAAAGAGAAGATG
TCTGGAGAGAAGGGGAAGAAGAAGGGAAAGAAATGAATGGATTCGGCCCT
CGAATCCCTGCAGAATACCGATCTAGCGGAAGAAATTGAAGCCATCAATG
CCATCTACGAACCGGACACCCTTACCATCACTAACACCTCTGCCTCGACC
GGCCCCTCAACTCTCGACCTCGGCGGCTCCGGCTCTTCAGACTCTTCTCC
TCCTTCAACAACAATAAAGCTCCAACTCCCAGAACACCCTCACTTGTCCT
TCCTCCTCGGATTCAACTCAACATATCCCGACACCCCGCCCAAAATCCTA
GGAACAGCATCCACAGCCTCACGAGGAGAGGGCAAGCTCGCCGTCGATGT
ACTAGAGGACATTCTCAGCCGCACATACCAGCCGGGCGCGAAATCCGTCT
TCGTCGGGCGCGCAGCCCACGTCACGAGTCTGGACCAGGCAAAGGCGTTC
CTGGATCATCTGCTCGCGACGGAGAAAAAGGTTGCGTCCGCGACGCATAA
TATCAGTGCATGGAGGATTCGCGAGGTGAAATCATCTACTTCTACTGCTG
GCGGTAGTAAGAATGGAGAAGCTACAGAGATGATTGTGCAGGATTGTGAT
GATGATGGGGAGACGGCTGCTGGAGGTCGACTACTGCATTTGATGCAGTT
GATGGATGTTTGGGATGTGGTGGTTGTGGTGACAAGATGGTATGGCGGTG
TGTTGCTGGGGCCGGATCGGTTTCGCATTATCAATGCGGCCGGGAGGGAT
GCGCTGGTCAAGGGGGGTTTTGTTAAAGAGAAGATGTCTGGAGAGAAGGG
GAAGAAGAAGGGAAAGAAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000111.6 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR020568 |
| DBxref | InterPro:IPR016135 |
| DBxref | InterPro:IPR020569 |
| DBxref | InterPro:IPR036956 |
| DBxref | InterPro:IPR001498 |
| DBxref | InterPro:IPR006575 |
| DBxref | PFAM:PF01205 |
| DBxref | PFAM:PF05773 |
| Product | Uncharacterized protein family UPF0029 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:1138850..1139887 + |
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