You are here

Home

CAN33_18040-T1, CAN33_18040-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_18040-T1
Unique NameCAN33_18040-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1149742..1150815+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_18040-T1 ID=CAN33_18040-T1|Name=CAN33_18040-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1074bp|location=Sequence derived from alignment at NKJJ01000011.1:1149742..1150815+ (Aspergillus niger FDAARGOS_311)
ATGGCCGTAAAGTATGCCAAAGACCAGCCTCCAGGCTTCTCCAATCGCAT
TGAACGGGTGGCTATTGTTGGCGTAAGTCAGAACATAGATCTTGGCAATC
ATCACATCTTTAGTACTGACTCGGATGCTTCATAGGCTGGTGGGTCCATC
GGTCATTATATCGCTACAGAGCTTGTCAGGACAGGCAAGCACACAGTTAC
TGGTTTAACCCGGCCATGCAGCAAGAACAAGCTGCCGGAAGGCGTGAAGC
CTTTCTACATCGACTACGATGATGAATCAACCCTTGTCAAGGCCCTGCAA
GGCCAACAGTTTCTCGTAATAACCATGTCTGTCATGGCACCACCGGATAC
TCACGCCAAATTAATTCGAGCAGCAGCCAAAGCCGGTCTCCCATATGTAA
TGCCCAATGCCTATGGCTCCGACTTCACCAACGACGCTTTGGCCAAGGAG
ACTCGCAGAGGAGACGTGATTCGCAAGTCTCTCCAGGAAATCGAGGCCAC
AAATGTCTGCTCGTGGATCGCGCTCGTCTGTGGCTTCTGGTATGAGTTTA
GTATGGCTCGGGGAGCGGAGTGTTTCGGGTTTGATGTGCAGAGAAAGCAT
CTCACCCTTATTGATAACGGGAACACTAAAATTAACATTAGTACTTGGGA
TCAATGTGGCCGTGCAGTTGCCGCTCTTTTGAATCTAAAGGAGCTGCCGG
ATGGTCCAGGCGATACGAGCCCAACAGTGAGCACATGGAAGAATAGACCT
CTGTACATTGCTAGCTTTACGATAAGCCAGAGGGACATATTCGAGAGTTG
GAAAAGGGTCACCGGCGATAAGGACGAGGAATGGACTCTTGAATACGCGC
CAAGCCACGAACGGTATGCTCAAGGCCAGGAACGGTTGGAGAAGGGTGAC
AAACTGGGATATGTTCAAATGTTATACACGCGGCAATTCTACCCCAATGG
GGACGGTAACTTTGGAGAGAAGCATGGCCTGGCTAATGATGCCCTGGGAT
TGCCCCGAGAAAACCTCGATGAATTCACCAAGCGTGCCAAGGAGATGATT
GAAGGCGGCTTCGCTTATCACTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000011.1:1149742..1150815+

>CAN33_18040-T1 ID=CAN33_18040-T1|Name=CAN33_18040-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2022bp|location=Sequence derived from alignment at NKJJ01000011.1:1149742..1150815+ (Aspergillus niger FDAARGOS_311)
ATGGCCGTAAAGTATGCCAAAGACCAGCCTCCAGGCTTCTCCAATCGCAT
TGAACGGGTGGCTATTGTTGGCGCTGGTGGGTCCATCGGTCATTATATCG
CTACAGAGCTTGTCAGGACAGGCAAGCACACAGTTACTGGTTTAACCCGG
CCATGCAGCAAGAACAAGCTGCCGGAAGGCGTGAAGCCTTTCTACATCGA
CTACGATGATGAATCAACCCTTGTCAAGGCCCTGCAAGGCCAACAGTTTC
TCGTAATAACCATGTCTGTCATGGCACCACCGGATACTCACGCCAAATTA
ATTCGAGCAGCAGCCAAAGCCGGTCTCCCATATGTAATGCCCAATGCCTA
TGGCTCCGACTTCACCAACGACGCTTTGGCCAAGGAGACTCGCAGAGGAG
ACGTGATTCGCAAGTCTCTCCAGGAAATCGAGGCCACAAATGTCTGCTCG
TGGATCGCGCTCGTCTGTGGCTTCTGGTATGAGTTTAGTATGGCTCGGGG
AGCGGAGTGTTTCGGGTTTGATGTGCAGAGAAAGCATCTCACCCTTATTG
ATAACGGGAACACTAAAATTAACATTAGTACTTGGGATCAATGTGGCCGT
GCAGTTGCCGCTCTTTTGAATCTAAAGGAGCTGCCGGATGGTCCAGGCGA
TACGAGCCCAACAGTGAGCACATGGAAGAATAGACCTCTGTACATTGCTA
GCTTTACGATAAGCCAGAGGGACATATTCGAGAGTTGGAAAAGGGTCACC
GGCGATAAGGACGAGGAATGGACTCTTGAATACGCGCCAAGCCACGAACG
GTATGCTCAAGGCCAGGAACGGTTGGAGAAGGGTGACAAACTGGGATATG
TTCAAATGTTATACACGCGGCAATTCTACCCCAATGGGGACGGTAACTTT
GGAGAGAAGCATGGCCTGGCTAATGATGCCCTGGGATTGCCCCGAGAAAA
CCTCGATGAATTCACCAAGCGTGCCAAGGAGATGATTGAAGGCGGCTTCG
CTTATCACTGAATGGCCGTAAAGTATGCCAAAGACCAGCCTCCAGGCTTC
TCCAATCGCATTGAACGGGTGGCTATTGTTGGCGCTGGTGGGTCCATCGG
TCATTATATCGCTACAGAGCTTGTCAGGACAGGCAAGCACACAGTTACTG
GTTTAACCCGGCCATGCAGCAAGAACAAGCTGCCGGAAGGCGTGAAGCCT
TTCTACATCGACTACGATGATGAATCAACCCTTGTCAAGGCCCTGCAAGG
CCAACAGTTTCTCGTAATAACCATGTCTGTCATGGCACCACCGGATACTC
ACGCCAAATTAATTCGAGCAGCAGCCAAAGCCGGTCTCCCATATGTAATG
CCCAATGCCTATGGCTCCGACTTCACCAACGACGCTTTGGCCAAGGAGAC
TCGCAGAGGAGACGTGATTCGCAAGTCTCTCCAGGAAATCGAGGCCACAA
ATGTCTGCTCGTGGATCGCGCTCGTCTGTGGCTTCTGGTATGAGTTTAGT
ATGGCTCGGGGAGCGGAGTGTTTCGGGTTTGATGTGCAGAGAAAGCATCT
CACCCTTATTGATAACGGGAACACTAAAATTAACATTAGTACTTGGGATC
AATGTGGCCGTGCAGTTGCCGCTCTTTTGAATCTAAAGGAGCTGCCGGAT
GGTCCAGGCGATACGAGCCCAACAGTGAGCACATGGAAGAATAGACCTCT
GTACATTGCTAGCTTTACGATAAGCCAGAGGGACATATTCGAGAGTTGGA
AAAGGGTCACCGGCGATAAGGACGAGGAATGGACTCTTGAATACGCGCCA
AGCCACGAACGGTATGCTCAAGGCCAGGAACGGTTGGAGAAGGGTGACAA
ACTGGGATATGTTCAAATGTTATACACGCGGCAATTCTACCCCAATGGGG
ACGGTAACTTTGGAGAGAAGCATGGCCTGGCTAATGATGCCCTGGGATTG
CCCCGAGAAAACCTCGATGAATTCACCAAGCGTGCCAAGGAGATGATTGA
AGGCGGCTTCGCTTATCACTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_18040CAN33_18040Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18040-T1.exon1CAN33_18040-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_18040-T1.exon2CAN33_18040-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18040-T1.cdsCAN33_18040-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18040-T1CAN33_18040-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000111.6
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR016040
DBxrefPFAM:PF03435
DBxrefPFAM:PF05368
DBxrefPFAM:PF13460
ProductNADH(P)-binding family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1149742..1150815 +
Powered by Drupal