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CAN33_18055-T1, CAN33_18055-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_18055-T1
Unique NameCAN33_18055-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1158495..1159858+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_18055-T1 ID=CAN33_18055-T1|Name=CAN33_18055-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1364bp|location=Sequence derived from alignment at NKJJ01000011.1:1158495..1159858+ (Aspergillus niger FDAARGOS_311)
ATGGCGTCTCGTCCTACCGTCACCATCGCCGGCGCTGATGGCAAGCCCAC
GGGGGCTACCTACCCCTCCCGGCTGTTTTCGCCTCCCCCATCCGTCTTGA
TGTTGTCCAGTATGTTTCAGCCTTTTTACGACAAAAAATCGATCTCGCAG
AGAGGAATCATGAGAAGCGGAGGATATTTGATGGCTGACGGATTTCGAAT
TACAGGCAGGTGCACACCGGTATGGCCAAGAACAAGAGACAGCCTTACGC
CGTGAGCGAGAAGGCTGGTGAACAGACCTCTGCTGAGTCCTGGGGTACCG
GTATGTGCACAAATTCGAAGGAACGCCAAGAAATTCGCAGGGGAATTGGG
ATGGCTGATGGATGTGAATAACTTCAGGTCGCGCTGTCGCTCGTATCCCC
CGTGTCTCCGGTGGTGGTACTCACCGTGCCGGTCAGGCCGCTTTCGGTAA
CCAGTGCCGTTCCGGTCGTATGTTCGCCCCTACCAAGGTCTGGCGCAAGT
GGCACCAGAAGGTCAACGTTGGCCAGAGGTATGATAATAATCCCGACCGA
CGAGGTAACACGATTGAGCCAGGAGAAGGTGAACTAATGGCTGCTTTTTA
GACGTTTCGCTACTGCCTCTGCCCTCGCTGCTTCTTCCGTTCCTTCTCTT
CTGTTCGCTCGCGGTCACCGCGTTGCCAACGTTCCTGAGGTCCCTCTGGT
CGTTGACTCCAAGACCTTCGAGAACTCCGCTGTTACCAAGACCAAGGCCG
CCGTTGCCCTCCTCCAGGCCGTCGGTGCCGGTGCCGACCTTGTCAAGGTC
CAGAAGTCCCGCAAGATGCGTGCCGGTAAGGGTAAGCTGAGGAACCGCCG
CTTCCGCCAGCGCCGCGGTCCTCTGGTTGTCTACAACCCCGAGGTTGATG
GCAAGGAGCTCGTCCGTGCCTTCCGCAACATCCCCGGTGTTGAGACCTCC
TCCGTCTTCTCCCTCAACCTCCTCCAGCTCGCCCCCGGTGGTCACCTCGG
TCGCTTCATCGTCTGGTCCTCTGCTGCCTTCGAGGCCCTCGACAAGGTCT
ACGGCACCACCACCACCGCCTCCGCCCTCAAGAAGGACTACCTCCTCCCC
CAGAACGTTGTTGCCAACGCCGACCTGGCCCGTCTCATCAACTCTTCTGA
GATCCAGTCCGTCCTCCGCGCCCCCAAGGGTGAGGCTCGCACCAAGCGTA
CCAACATCCAGAAGAAGAACCCTCTCCGCAACAAGCAGGTCATGCTCCGT
CTCAACCCTTACGCTGCTGCTTTCTCCAAGGAGAAGCTCGGCCAGCAGAA
GGTTGAGGCCGCTAAGCCCGAGCGCGCTTCCAAGGACTTCCTCAACACCC
TCTACGAGGCGTAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:1158495..1159858+

>CAN33_18055-T1 ID=CAN33_18055-T1|Name=CAN33_18055-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4440bp|location=Sequence derived from alignment at NKJJ01000011.1:1158495..1159858+ (Aspergillus niger FDAARGOS_311)
ATGGCGTCTCGTCCTACCGTCACCATCGCCGGCGCTGATGGCAAGCCCAC
GGGGGCTACCTACCCCTCCCGGCTGTTTTCGCCTCCCCCATCCGTCTTGA
TGCAGGTGCACACCGGTATGGCCAAGAACAAGAGACAGCCTTACGCCGTG
AGCGAGAAGGCTGGTGAACAGACCTCTGCTGAGTCCTGGGGTACCGGTCG
CGCTGTCGCTCGTATCCCCCGTGTCTCCGGTGGTGGTACTCACCGTGCCG
GTCAGGCCGCTTTCGGTAACCAGTGCCGTTCCGGTCGTATGTTCGCCCCT
ACCAAGGTCTGGCGCAAGTGGCACCAGAAGGTCAACGTTGGCCAGAGACG
TTTCGCTACTGCCTCTGCCCTCGCTGCTTCTTCCGTTCCTTCTCTTCTGT
TCGCTCGCGGTCACCGCGTTGCCAACGTTCCTGAGGTCCCTCTGGTCGTT
GACTCCAAGACCTTCGAGAACTCCGCTGTTACCAAGACCAAGGCCGCCGT
TGCCCTCCTCCAGGCCGTCGGTGCCGGTGCCGACCTTGTCAAGGTCCAGA
AGTCCCGCAAGATGCGTGCCGGTAAGGGTAAGCTGAGGAACCGCCGCTTC
CGCCAGCGCCGCGGTCCTCTGGTTGTCTACAACCCCGAGGTTGATGGCAA
GGAGCTCGTCCGTGCCTTCCGCAACATCCCCGGTGTTGAGACCTCCTCCG
TCTTCTCCCTCAACCTCCTCCAGCTCGCCCCCGGTGGTCACCTCGGTCGC
TTCATCGTCTGGTCCTCTGCTGCCTTCGAGGCCCTCGACAAGGTCTACGG
CACCACCACCACCGCCTCCGCCCTCAAGAAGGACTACCTCCTCCCCCAGA
ACGTTGTTGCCAACGCCGACCTGGCCCGTCTCATCAACTCTTCTGAGATC
CAGTCCGTCCTCCGCGCCCCCAAGGGTGAGGCTCGCACCAAGCGTACCAA
CATCCAGAAGAAGAACCCTCTCCGCAACAAGCAGGTCATGCTCCGTCTCA
ACCCTTACGCTGCTGCTTTCTCCAAGGAGAAGCTCGGCCAGCAGAAGGTT
GAGGCCGCTAAGCCCGAGCGCGCTTCCAAGGACTTCCTCAACACCCTCTA
CGAGGCGTAAATGGCGTCTCGTCCTACCGTCACCATCGCCGGCGCTGATG
GCAAGCCCACGGGGGCTACCTACCCCTCCCGGCTGTTTTCGCCTCCCCCA
TCCGTCTTGATGCAGGTGCACACCGGTATGGCCAAGAACAAGAGACAGCC
TTACGCCGTGAGCGAGAAGGCTGGTGAACAGACCTCTGCTGAGTCCTGGG
GTACCGGTCGCGCTGTCGCTCGTATCCCCCGTGTCTCCGGTGGTGGTACT
CACCGTGCCGGTCAGGCCGCTTTCGGTAACCAGTGCCGTTCCGGTCGTAT
GTTCGCCCCTACCAAGGTCTGGCGCAAGTGGCACCAGAAGGTCAACGTTG
GCCAGAGACGTTTCGCTACTGCCTCTGCCCTCGCTGCTTCTTCCGTTCCT
TCTCTTCTGTTCGCTCGCGGTCACCGCGTTGCCAACGTTCCTGAGGTCCC
TCTGGTCGTTGACTCCAAGACCTTCGAGAACTCCGCTGTTACCAAGACCA
AGGCCGCCGTTGCCCTCCTCCAGGCCGTCGGTGCCGGTGCCGACCTTGTC
AAGGTCCAGAAGTCCCGCAAGATGCGTGCCGGTAAGGGTAAGCTGAGGAA
CCGCCGCTTCCGCCAGCGCCGCGGTCCTCTGGTTGTCTACAACCCCGAGG
TTGATGGCAAGGAGCTCGTCCGTGCCTTCCGCAACATCCCCGGTGTTGAG
ACCTCCTCCGTCTTCTCCCTCAACCTCCTCCAGCTCGCCCCCGGTGGTCA
CCTCGGTCGCTTCATCGTCTGGTCCTCTGCTGCCTTCGAGGCCCTCGACA
AGGTCTACGGCACCACCACCACCGCCTCCGCCCTCAAGAAGGACTACCTC
CTCCCCCAGAACGTTGTTGCCAACGCCGACCTGGCCCGTCTCATCAACTC
TTCTGAGATCCAGTCCGTCCTCCGCGCCCCCAAGGGTGAGGCTCGCACCA
AGCGTACCAACATCCAGAAGAAGAACCCTCTCCGCAACAAGCAGGTCATG
CTCCGTCTCAACCCTTACGCTGCTGCTTTCTCCAAGGAGAAGCTCGGCCA
GCAGAAGGTTGAGGCCGCTAAGCCCGAGCGCGCTTCCAAGGACTTCCTCA
ACACCCTCTACGAGGCGTAAATGGCGTCTCGTCCTACCGTCACCATCGCC
GGCGCTGATGGCAAGCCCACGGGGGCTACCTACCCCTCCCGGCTGTTTTC
GCCTCCCCCATCCGTCTTGATGCAGGTGCACACCGGTATGGCCAAGAACA
AGAGACAGCCTTACGCCGTGAGCGAGAAGGCTGGTGAACAGACCTCTGCT
GAGTCCTGGGGTACCGGTCGCGCTGTCGCTCGTATCCCCCGTGTCTCCGG
TGGTGGTACTCACCGTGCCGGTCAGGCCGCTTTCGGTAACCAGTGCCGTT
CCGGTCGTATGTTCGCCCCTACCAAGGTCTGGCGCAAGTGGCACCAGAAG
GTCAACGTTGGCCAGAGACGTTTCGCTACTGCCTCTGCCCTCGCTGCTTC
TTCCGTTCCTTCTCTTCTGTTCGCTCGCGGTCACCGCGTTGCCAACGTTC
CTGAGGTCCCTCTGGTCGTTGACTCCAAGACCTTCGAGAACTCCGCTGTT
ACCAAGACCAAGGCCGCCGTTGCCCTCCTCCAGGCCGTCGGTGCCGGTGC
CGACCTTGTCAAGGTCCAGAAGTCCCGCAAGATGCGTGCCGGTAAGGGTA
AGCTGAGGAACCGCCGCTTCCGCCAGCGCCGCGGTCCTCTGGTTGTCTAC
AACCCCGAGGTTGATGGCAAGGAGCTCGTCCGTGCCTTCCGCAACATCCC
CGGTGTTGAGACCTCCTCCGTCTTCTCCCTCAACCTCCTCCAGCTCGCCC
CCGGTGGTCACCTCGGTCGCTTCATCGTCTGGTCCTCTGCTGCCTTCGAG
GCCCTCGACAAGGTCTACGGCACCACCACCACCGCCTCCGCCCTCAAGAA
GGACTACCTCCTCCCCCAGAACGTTGTTGCCAACGCCGACCTGGCCCGTC
TCATCAACTCTTCTGAGATCCAGTCCGTCCTCCGCGCCCCCAAGGGTGAG
GCTCGCACCAAGCGTACCAACATCCAGAAGAAGAACCCTCTCCGCAACAA
GCAGGTCATGCTCCGTCTCAACCCTTACGCTGCTGCTTTCTCCAAGGAGA
AGCTCGGCCAGCAGAAGGTTGAGGCCGCTAAGCCCGAGCGCGCTTCCAAG
GACTTCCTCAACACCCTCTACGAGGCGTAAATGGCGTCTCGTCCTACCGT
CACCATCGCCGGCGCTGATGGCAAGCCCACGGGGGCTACCTACCCCTCCC
GGCTGTTTTCGCCTCCCCCATCCGTCTTGATGCAGGTGCACACCGGTATG
GCCAAGAACAAGAGACAGCCTTACGCCGTGAGCGAGAAGGCTGGTGAACA
GACCTCTGCTGAGTCCTGGGGTACCGGTCGCGCTGTCGCTCGTATCCCCC
GTGTCTCCGGTGGTGGTACTCACCGTGCCGGTCAGGCCGCTTTCGGTAAC
CAGTGCCGTTCCGGTCGTATGTTCGCCCCTACCAAGGTCTGGCGCAAGTG
GCACCAGAAGGTCAACGTTGGCCAGAGACGTTTCGCTACTGCCTCTGCCC
TCGCTGCTTCTTCCGTTCCTTCTCTTCTGTTCGCTCGCGGTCACCGCGTT
GCCAACGTTCCTGAGGTCCCTCTGGTCGTTGACTCCAAGACCTTCGAGAA
CTCCGCTGTTACCAAGACCAAGGCCGCCGTTGCCCTCCTCCAGGCCGTCG
GTGCCGGTGCCGACCTTGTCAAGGTCCAGAAGTCCCGCAAGATGCGTGCC
GGTAAGGGTAAGCTGAGGAACCGCCGCTTCCGCCAGCGCCGCGGTCCTCT
GGTTGTCTACAACCCCGAGGTTGATGGCAAGGAGCTCGTCCGTGCCTTCC
GCAACATCCCCGGTGTTGAGACCTCCTCCGTCTTCTCCCTCAACCTCCTC
CAGCTCGCCCCCGGTGGTCACCTCGGTCGCTTCATCGTCTGGTCCTCTGC
TGCCTTCGAGGCCCTCGACAAGGTCTACGGCACCACCACCACCGCCTCCG
CCCTCAAGAAGGACTACCTCCTCCCCCAGAACGTTGTTGCCAACGCCGAC
CTGGCCCGTCTCATCAACTCTTCTGAGATCCAGTCCGTCCTCCGCGCCCC
CAAGGGTGAGGCTCGCACCAAGCGTACCAACATCCAGAAGAAGAACCCTC
TCCGCAACAAGCAGGTCATGCTCCGTCTCAACCCTTACGCTGCTGCTTTC
TCCAAGGAGAAGCTCGGCCAGCAGAAGGTTGAGGCCGCTAAGCCCGAGCG
CGCTTCCAAGGACTTCCTCAACACCCTCTACGAGGCGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_18055CAN33_18055Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18055-T1.exon1CAN33_18055-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_18055-T1.exon2CAN33_18055-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_18055-T1.exon3CAN33_18055-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_18055-T1.exon4CAN33_18055-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18055-T1.cdsCAN33_18055-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18055-T1CAN33_18055-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000111.6
NoteBUSCO:EOG0926354S
DBxrefInterPro:IPR013000
DBxrefInterPro:IPR023574
DBxrefInterPro:IPR025755
DBxrefInterPro:IPR002136
DBxrefPFAM:PF14374
DBxrefPFAM:PF00573
ProductRibosomal L4/L1 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1158495..1159858 +
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