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CAN33_18080-T1, CAN33_18080-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_18080-T1
Unique NameCAN33_18080-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1184829..1185978-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_18080-T1 ID=CAN33_18080-T1|Name=CAN33_18080-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1150bp|location=Sequence derived from alignment at NKJJ01000011.1:1184829..1185978- (Aspergillus niger FDAARGOS_311)
ATGCCAGCAATAAAACAATTCCCCACCCAACTGGCCCACACCCTCAGAAC
CCACAATGGTAAGCTAACTCTACGCCTTAAGCTCTAGAAGCTCTAGATCC
CCTCTGACGTACCTCAGGCCCCGTGAACGCAGTGACCTTCTCCAGCTATC
CTGGAACCTATGTCCTCACCGGCTCGACAGATCGCGCTATTCACCTCTCC
CGGGCTATTCCCAACAATAACAATGCTGCCGCCGCAGAGACGACGTCCCC
GATCCAGAAGTATGAAGCGCACGGGTACTCTGTGTTGGACATTGCCGTCG
CAGCAGACAACTCCCGGTTCGCCAGCGTTGGTGGAGACCGCCAGGTTTTT
CTGTGGGATGTCGAGCAAGGTGGAACAATCAGGCGCTGGAGTGGACATAA
TGCGCGTGTTGAGGCAGTCCAATTCGCAGGCGAGGACGACTCTGTAGTTG
TGTCTGGTAAATTCGTCCTGATTTATATGCACGCTTTGGTTATGATCACT
GACGGGTTTTGCGTACGGTTTAGGCAGTGCAGACACAACTATCAACATCT
GGGATACCAAGTCCAACTCCTACAAGCCAATTCAGACCCTCACCGAAGCC
CGAGATACTGTTTCTTCCTTGCACGTACATATGCCCACGTACTCTATCGC
AAGCGCGAGCTACGATGGTCGAGTCCGAGTGTACGATATCCGAATGGGGC
GCACCCTTGTTGATGTTCTCGCGCATCCTGTTACTAGTGTTCGCTGCTCC
AGTGACGGCAATGCTCTTCTAGCATCTACAACAGACGGGCGCATCCGAAT
GCTGGACCGGAGTGACGGCAAGCTATTAAAGGCGTTTGGCGGCGACGATG
CCAGTCCAATCCAAGGTAATAGCACTGCCATATATCGCAAAAGCGAACTT
CGAATTCGCTCTGTTTTCGCGAAAGCAGACGCCATTGTCCTCAGCGGGAG
TGAAGCAAATGACTCCGGCAATGGCAATGGTGCTACGCAGGCGTCCGTAT
TCGCCTGGGATGTGCTTAGTGGAGAAGTGGTCGCGTGTGTTCCAGCTGGA
CCAGGCGTCAAGGCCGTGAGTGCTGTATCGTGGAATGAAAAAGGAGGTTG
CTGGGCTGGTGGTTGTTCAGATGGTATGTCTCAGCTATGGCAGTTTCTAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:1184829..1185978-

>CAN33_18080-T1 ID=CAN33_18080-T1|Name=CAN33_18080-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3876bp|location=Sequence derived from alignment at NKJJ01000011.1:1184829..1185978- (Aspergillus niger FDAARGOS_311)
ATGGTATGTCTCAGCTATGGCAGTTTCTAAGCAGTGCAGACACAACTATC
AACATCTGGGATACCAAGTCCAACTCCTACAAGCCAATTCAGACCCTCAC
CGAAGCCCGAGATACTGTTTCTTCCTTGCACGTACATATGCCCACGTACT
CTATCGCAAGCGCGAGCTACGATGGTCGAGTCCGAGTGTACGATATCCGA
ATGGGGCGCACCCTTGTTGATGTTCTCGCGCATCCTGTTACTAGTGTTCG
CTGCTCCAGTGACGGCAATGCTCTTCTAGCATCTACAACAGACGGGCGCA
TCCGAATGCTGGACCGGAGTGACGGCAAGCTATTAAAGGCGTTTGGCGGC
GACGATGCCAGTCCAATCCAAGGTAATAGCACTGCCATATATCGCAAAAG
CGAACTTCGAATTCGCTCTGTTTTCGCGAAAGCAGACGCCATTGTCCTCA
GCGGGAGTGAAGCAAATGACTCCGGCAATGGCAATGGTGCTACGCAGGCG
TCCGTATTCGCCTGGGATGTGCTTAGTGGAGAAGTGGTCGCGTGTGTTCC
AGCTGGACCAGGCGTCAAGGCCGCCCCGTGAACGCAGTGACCTTCTCCAG
CTATCCTGGAACCTATGTCCTCACCGGCTCGACAGATCGCGCTATTCACC
TCTCCCGGGCTATTCCCAACAATAACAATGCTGCCGCCGCAGAGACGACG
TCCCCGATCCAGAAGTATGAAGCGCACGGGTACTCTGTGTTGGACATTGC
CGTCGCAGCAGACAACTCCCGGTTCGCCAGCGTTGGTGGAGACCGCCAGG
TTTTTCTGTGGGATGTCGAGCAAGGTGGAACAATCAGGCGCTGGAGTGGA
CATAATGCGCGTGTTGAGGCAGTCCAATTCGCAGGCGAGGACGACTCTGT
AGTTGTGTCTGATGCCAGCAATAAAACAATTCCCCACCCAACTGGCCCAC
ACCCTCAGAACCCACAATGATGGTATGTCTCAGCTATGGCAGTTTCTAAG
CAGTGCAGACACAACTATCAACATCTGGGATACCAAGTCCAACTCCTACA
AGCCAATTCAGACCCTCACCGAAGCCCGAGATACTGTTTCTTCCTTGCAC
GTACATATGCCCACGTACTCTATCGCAAGCGCGAGCTACGATGGTCGAGT
CCGAGTGTACGATATCCGAATGGGGCGCACCCTTGTTGATGTTCTCGCGC
ATCCTGTTACTAGTGTTCGCTGCTCCAGTGACGGCAATGCTCTTCTAGCA
TCTACAACAGACGGGCGCATCCGAATGCTGGACCGGAGTGACGGCAAGCT
ATTAAAGGCGTTTGGCGGCGACGATGCCAGTCCAATCCAAGGTAATAGCA
CTGCCATATATCGCAAAAGCGAACTTCGAATTCGCTCTGTTTTCGCGAAA
GCAGACGCCATTGTCCTCAGCGGGAGTGAAGCAAATGACTCCGGCAATGG
CAATGGTGCTACGCAGGCGTCCGTATTCGCCTGGGATGTGCTTAGTGGAG
AAGTGGTCGCGTGTGTTCCAGCTGGACCAGGCGTCAAGGCCGCCCCGTGA
ACGCAGTGACCTTCTCCAGCTATCCTGGAACCTATGTCCTCACCGGCTCG
ACAGATCGCGCTATTCACCTCTCCCGGGCTATTCCCAACAATAACAATGC
TGCCGCCGCAGAGACGACGTCCCCGATCCAGAAGTATGAAGCGCACGGGT
ACTCTGTGTTGGACATTGCCGTCGCAGCAGACAACTCCCGGTTCGCCAGC
GTTGGTGGAGACCGCCAGGTTTTTCTGTGGGATGTCGAGCAAGGTGGAAC
AATCAGGCGCTGGAGTGGACATAATGCGCGTGTTGAGGCAGTCCAATTCG
CAGGCGAGGACGACTCTGTAGTTGTGTCTGATGCCAGCAATAAAACAATT
CCCCACCCAACTGGCCCACACCCTCAGAACCCACAATGATGGTATGTCTC
AGCTATGGCAGTTTCTAAGCAGTGCAGACACAACTATCAACATCTGGGAT
ACCAAGTCCAACTCCTACAAGCCAATTCAGACCCTCACCGAAGCCCGAGA
TACTGTTTCTTCCTTGCACGTACATATGCCCACGTACTCTATCGCAAGCG
CGAGCTACGATGGTCGAGTCCGAGTGTACGATATCCGAATGGGGCGCACC
CTTGTTGATGTTCTCGCGCATCCTGTTACTAGTGTTCGCTGCTCCAGTGA
CGGCAATGCTCTTCTAGCATCTACAACAGACGGGCGCATCCGAATGCTGG
ACCGGAGTGACGGCAAGCTATTAAAGGCGTTTGGCGGCGACGATGCCAGT
CCAATCCAAGGTAATAGCACTGCCATATATCGCAAAAGCGAACTTCGAAT
TCGCTCTGTTTTCGCGAAAGCAGACGCCATTGTCCTCAGCGGGAGTGAAG
CAAATGACTCCGGCAATGGCAATGGTGCTACGCAGGCGTCCGTATTCGCC
TGGGATGTGCTTAGTGGAGAAGTGGTCGCGTGTGTTCCAGCTGGACCAGG
CGTCAAGGCCGCCCCGTGAACGCAGTGACCTTCTCCAGCTATCCTGGAAC
CTATGTCCTCACCGGCTCGACAGATCGCGCTATTCACCTCTCCCGGGCTA
TTCCCAACAATAACAATGCTGCCGCCGCAGAGACGACGTCCCCGATCCAG
AAGTATGAAGCGCACGGGTACTCTGTGTTGGACATTGCCGTCGCAGCAGA
CAACTCCCGGTTCGCCAGCGTTGGTGGAGACCGCCAGGTTTTTCTGTGGG
ATGTCGAGCAAGGTGGAACAATCAGGCGCTGGAGTGGACATAATGCGCGT
GTTGAGGCAGTCCAATTCGCAGGCGAGGACGACTCTGTAGTTGTGTCTGA
TGCCAGCAATAAAACAATTCCCCACCCAACTGGCCCACACCCTCAGAACC
CACAATGATGGTATGTCTCAGCTATGGCAGTTTCTAAGCAGTGCAGACAC
AACTATCAACATCTGGGATACCAAGTCCAACTCCTACAAGCCAATTCAGA
CCCTCACCGAAGCCCGAGATACTGTTTCTTCCTTGCACGTACATATGCCC
ACGTACTCTATCGCAAGCGCGAGCTACGATGGTCGAGTCCGAGTGTACGA
TATCCGAATGGGGCGCACCCTTGTTGATGTTCTCGCGCATCCTGTTACTA
GTGTTCGCTGCTCCAGTGACGGCAATGCTCTTCTAGCATCTACAACAGAC
GGGCGCATCCGAATGCTGGACCGGAGTGACGGCAAGCTATTAAAGGCGTT
TGGCGGCGACGATGCCAGTCCAATCCAAGGTAATAGCACTGCCATATATC
GCAAAAGCGAACTTCGAATTCGCTCTGTTTTCGCGAAAGCAGACGCCATT
GTCCTCAGCGGGAGTGAAGCAAATGACTCCGGCAATGGCAATGGTGCTAC
GCAGGCGTCCGTATTCGCCTGGGATGTGCTTAGTGGAGAAGTGGTCGCGT
GTGTTCCAGCTGGACCAGGCGTCAAGGCCGCCCCGTGAACGCAGTGACCT
TCTCCAGCTATCCTGGAACCTATGTCCTCACCGGCTCGACAGATCGCGCT
ATTCACCTCTCCCGGGCTATTCCCAACAATAACAATGCTGCCGCCGCAGA
GACGACGTCCCCGATCCAGAAGTATGAAGCGCACGGGTACTCTGTGTTGG
ACATTGCCGTCGCAGCAGACAACTCCCGGTTCGCCAGCGTTGGTGGAGAC
CGCCAGGTTTTTCTGTGGGATGTCGAGCAAGGTGGAACAATCAGGCGCTG
GAGTGGACATAATGCGCGTGTTGAGGCAGTCCAATTCGCAGGCGAGGACG
ACTCTGTAGTTGTGTCTGATGCCAGCAATAAAACAATTCCCCACCCAACT
GGCCCACACCCTCAGAACCCACAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_18080CAN33_18080Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18080-T1CAN33_18080-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18080-T1.cdsCAN33_18080-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18080-T1.exon4CAN33_18080-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_18080-T1.exon3CAN33_18080-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_18080-T1.exon2CAN33_18080-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_18080-T1.exon1CAN33_18080-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
ProductWD domain G-beta repeat family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1184829..1185978 -
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