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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:1280639..1283157+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_18225-T1 ID=CAN33_18225-T1|Name=CAN33_18225-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2519bp|location=Sequence derived from alignment at NKJJ01000011.1:1280639..1283157+ (Aspergillus niger FDAARGOS_311) ATGCCAATCAAACGCAAAGCTACGGATAGCGGTCGGTCAAGTAGAGCGTC
GAAACGGCCCACACCTGTGCCGGATATCGGTAGTAGTGATGAATACTCAG
ACTACGAGGAAGAAGTCAAGGATGATAACCTGAAAGGTAGCGTAGAAGTG
GAGTCTCGTTCATATGGGGTCTGCTTGCTGACATCTTCTGCTTGCAAGGT
GTCTTGGAGAAATTCTCTCTCGAATCTTTTAGCAACAAGAAGAGCGCCGC
CGTACAGAGACAGGACCCCGATTTCGGTTACAAGGACTTTTCCTCGCTAT
CGTTGAAACCCGATCATGCGAACCGCCCGCTCTGGATCGATCCTCTTAAG
GGAACTATTACCTTGGAGAGTTTCTCCCCTCTGGCACCCCAGGCGCAGGA
CTTCCTGACTACTATCGCCGAACCGCTGTCGCGTCCGACCCATCTGCACG
AATACCGATTGACAGGGAACAGTTTGTATGCGGCTGTCTCGGTGGGTTTG
CTGCCCCAGGATATCATCAACTTTCTAGATCGATTGTCGAAAACGCCGCT
TCCGGATACCATCAAGTCGTTCATTCTCGACTTCACGAAATCATACGGAA
AGATCAAGGTCGTGCTGAAACATAATCGCTTCTTCGTGGAAAGTACCGAT
CCGGCGATGTTGCAGATGCTGCTGCAGGATGAAGTTATTGGTTCTCAGCG
ATTGAAAGGCACGGAGGGCATTATTCAGCAGGCAGCCCCGAAAATGGGCG
GCCTGGTCATTCCGGGTACAAAGGATGCAGCGGGTGTCAGGCAGGCTTCG
GAGCAGAAGCCGGCGGAAGACGGTGCAGGCGAGGCTCGTAAAGAGGACGA
TATTCTGCTGGCTATTCGCGACGACGATGACGACGAGGAGGAAGTTCAAG
TGCACAGTTTCGAAATTCCCAACGAAGCAGTCGAACCCGTCAAGGCGCGC
TGTCAGGCTATGGGCTGTCCAGCATTGGAGGAGTATGATTTCCGAAATGA
TGAGATCAATCCCACCTTGGATATCGACTTGAAGCCGGCAGCACGAATTC
GAAGCTACCAAGAAAAGAGTTTGAGTAAGATGTTCGGTAACGGACGTGCG
AAGAGTGGAATTATCGTCTTGCCTTGTGGTGCCGGAAAAACGTTGGTGGG
TATTACGGCGGGCTGCACGATCAAGAAGGGGACAATTGTCTTGTGTACCA
GTTCAATGTCTGTGGTGCAATGGCGTAACGAGTTCTTGCGCTGGTCCAAT
ATTGATCCCGGTGATATTGCGGTTTTCACCTCAGATAACAAGGAGAAATT
CCGTCGATCGACTGGTATCATCGTGTCAACCTACTCCATGGTGTCCCAGA
CGCGTGCTCGGTCGCATGATGCGCAGAAGATGATGGATTGGATTCAGTCA
CGAGAGTGGGGTCTGATGATTCTTGACGAGGTGCACGTCGTGCCTGCATC
GATGTTCCGAAAGGTCACATCGGCAATCGCATGTCAGAGTAAATTGGGAT
TGACGGCAACGCTGCTGCGAGAGGATGACAAGATCAAGGATCTGAACTTC
CTGATTGGTCCCAAGTTGTACGAAGCCAACTGGATGGAACTGGCCGAGCA
AGGGCACATTGCCAAGGTTCAGTGCGCCGAGGTATGGTGTCCGATGACGA
CCGAATTCTACTCGGAGTACATGAGAGAAAAGTCAAGAAAGGCTGCTCTT
CTATACATTATGAACCCTCGGAAATTCCAAGCATGCCAGTTCCTGATCGA
CTACCACGAGAAGCGAGGTGACAAGGTCATTGTCTTTTCCGACAACGTTT
ACGCTCTTCAGCGGTATGCACTCAAGCTGAACAAGGCCTATATCTACGGC
GGTACTCCACAGAACGAGCGCATGCGCATTTTGGAGAATTTCCAGCACAA
TGAACAAGTCAATACCATCTTCCTCTCCAAGATCGGAGACACGTCGCTCG
ATCTGCCGGAAGCCACCTGTCTGATCCAGATCTCGTCGCATTACGGTTCC
CGTCGTCAGGAAGCCCAACGACTTGGTCGGATTCTGCGAGCCAAGCGTCG
AAACGACGAGGGATTCAACGCCTTCTTCTACTCGCTTGTGTCGAAAGACA
CAGATGAAATGTTCTACTCTTCCAAGCGACAGGCTTTCCTTGTCGACCAG
GGCTACGCGTTCAAGGTCATTACTCACCTGCAAGGCATCGAGAACCTGGA
AGGGTTGGCGTACGCCACGCCCAGCGAACGCCGTGAGCTGCTGCAGGAGG
TGATGTTACAGAACGAGACTTCTGCCGAGGTAGAGCACGTCACGGACGAT
CTCTTCTCAGGACGTTCGGGCGGCCAGCGAAAGGGAGCAGTCAAGCGCAG
TGCCGCGACACTCAGCGGCCTGGCCGGCGGTGAAGACATGGCGTATATCG
AGTACAACAAGAGCCGGAACAAGCAGCTGAAGGACAAGGTGGGCCATCAC
CCGCTGTTCCGGAAGCTGGAGCGGGAACGACTCAAGCGGAAGAAGGAGTT
GGAGGATTTCATGCGGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:1280639..1283157+ >CAN33_18225-T1 ID=CAN33_18225-T1|Name=CAN33_18225-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7200bp|location=Sequence derived from alignment at NKJJ01000011.1:1280639..1283157+ (Aspergillus niger FDAARGOS_311) ATGCCAATCAAACGCAAAGCTACGGATAGCGGTCGGTCAAGTAGAGCGTC GAAACGGCCCACACCTGTGCCGGATATCGGTAGTAGTGATGAATACTCAG ACTACGAGGAAGAAGTCAAGGATGATAACCTGAAAGGTGTCTTGGAGAAA TTCTCTCTCGAATCTTTTAGCAACAAGAAGAGCGCCGCCGTACAGAGACA GGACCCCGATTTCGGTTACAAGGACTTTTCCTCGCTATCGTTGAAACCCG ATCATGCGAACCGCCCGCTCTGGATCGATCCTCTTAAGGGAACTATTACC TTGGAGAGTTTCTCCCCTCTGGCACCCCAGGCGCAGGACTTCCTGACTAC TATCGCCGAACCGCTGTCGCGTCCGACCCATCTGCACGAATACCGATTGA CAGGGAACAGTTTGTATGCGGCTGTCTCGGTGGGTTTGCTGCCCCAGGAT ATCATCAACTTTCTAGATCGATTGTCGAAAACGCCGCTTCCGGATACCAT CAAGTCGTTCATTCTCGACTTCACGAAATCATACGGAAAGATCAAGGTCG TGCTGAAACATAATCGCTTCTTCGTGGAAAGTACCGATCCGGCGATGTTG CAGATGCTGCTGCAGGATGAAGTTATTGGTTCTCAGCGATTGAAAGGCAC GGAGGGCATTATTCAGCAGGCAGCCCCGAAAATGGGCGGCCTGGTCATTC CGGGTACAAAGGATGCAGCGGGTGTCAGGCAGGCTTCGGAGCAGAAGCCG GCGGAAGACGGTGCAGGCGAGGCTCTTCAAGTGCACAGTTTCGAAATTCC CAACGAAGCAGTCGAACCCGTCAAGGCGCGCTGTCAGGCTATGGGCTGTC CAGCATTGGAGGAGTATGATTTCCGAAATGATGAGATCAATCCCACCTTG GATATCGACTTGAAGCCGGCAGCACGAATTCGAAGCTACCAAGAAAAGAG TTTGAGTAAGATGTTCGGTAACGGACGTGCGAAGAGTGGAATTATCGTCT TGCCTTGTGGTGCCGGAAAAACGTTGGTGGGTATTACGGCGGGCTGCACG ATCAAGAAGGGGACAATTGTCTTGTGTACCAGTTCAATGTCTGTGGTGCA ATGGCGTAACGAGTTCTTGCGCTGGTCCAATATTGATCCCGGTGATATTG CGGTTTTCACCTCAGATAACAAGGAGAAATTCCGTCGATCGACTGGTATC ATCGTGTCAACCTACTCCATGGTGTCCCAGACGCGTGCTCGGTCGCATGA TGCGCAGAAGATGATGGATTGGATTCAGTCACGAGAGTGGGGTCTGATGA TTCTTGACGAGGTGCACGTCGTGCCTGCATCGATGTTCCGAAAGGTCACA TCGGCAATCGCATGTCAGAGTAAATTGGGATTGACGGCAACGCTGCTGCG AGAGGATGACAAGATCAAGGATCTGAACTTCCTGATTGGTCCCAAGTTGT ACGAAGCCAACTGGATGGAACTGGCCGAGCAAGGGCACATTGCCAAGGTT CAGTGCGCCGAGGTATGGTGTCCGATGACGACCGAATTCTACTCGGAGTA CATGAGAGAAAAGTCAAGAAAGGCTGCTCTTCTATACATTATGAACCCTC GGAAATTCCAAGCATGCCAGTTCCTGATCGACTACCACGAGAAGCGAGGT GACAAGGTCATTGTCTTTTCCGACAACGTTTACGCTCTTCAGCGGTATGC ACTCAAGCTGAACAAGGCCTATATCTACGGCGGTACTCCACAGAACGAGC GCATGCGCATTTTGGAGAATTTCCAGCACAATGAACAAGTCAATACCATC TTCCTCTCCAAGATCGGAGACACGTCGCTCGATCTGCCGGAAGCCACCTG TCTGATCCAGATCTCGTCGCATTACGGTTCCCGTCGTCAGGAAGCCCAAC GACTTGGTCGGATTCTGCGAGCCAAGCGTCGAAACGACGAGGGATTCAAC GCCTTCTTCTACTCGCTTGTGTCGAAAGACACAGATGAAATGTTCTACTC TTCCAAGCGACAGGCTTTCCTTGTCGACCAGGGCTACGCGTTCAAGGTCA TTACTCACCTGCAAGGCATCGAGAACCTGGAAGGGTTGGCGTACGCCACG CCCAGCGAACGCCGTGAGCTGCTGCAGGAGGTGATGTTACAGAACGAGAC TTCTGCCGAGGTAGAGCACGTCACGGACGATCTCTTCTCAGGACGTTCGG GCGGCCAGCGAAAGGGAGCAGTCAAGCGCAGTGCCGCGACACTCAGCGGC CTGGCCGGCGGTGAAGACATGGCGTATATCGAGTACAACAAGAGCCGGAA CAAGCAGCTGAAGGACAAGGTGGGCCATCACCCGCTGTTCCGGAAGCTGG AGCGGGAACGACTCAAGCGGAAGAAGGAGTTGGAGGATTTCATGCGGTAG ATGCCAATCAAACGCAAAGCTACGGATAGCGGTCGGTCAAGTAGAGCGTC GAAACGGCCCACACCTGTGCCGGATATCGGTAGTAGTGATGAATACTCAG ACTACGAGGAAGAAGTCAAGGATGATAACCTGAAAGGTGTCTTGGAGAAA TTCTCTCTCGAATCTTTTAGCAACAAGAAGAGCGCCGCCGTACAGAGACA GGACCCCGATTTCGGTTACAAGGACTTTTCCTCGCTATCGTTGAAACCCG ATCATGCGAACCGCCCGCTCTGGATCGATCCTCTTAAGGGAACTATTACC TTGGAGAGTTTCTCCCCTCTGGCACCCCAGGCGCAGGACTTCCTGACTAC TATCGCCGAACCGCTGTCGCGTCCGACCCATCTGCACGAATACCGATTGA CAGGGAACAGTTTGTATGCGGCTGTCTCGGTGGGTTTGCTGCCCCAGGAT ATCATCAACTTTCTAGATCGATTGTCGAAAACGCCGCTTCCGGATACCAT CAAGTCGTTCATTCTCGACTTCACGAAATCATACGGAAAGATCAAGGTCG TGCTGAAACATAATCGCTTCTTCGTGGAAAGTACCGATCCGGCGATGTTG CAGATGCTGCTGCAGGATGAAGTTATTGGTTCTCAGCGATTGAAAGGCAC GGAGGGCATTATTCAGCAGGCAGCCCCGAAAATGGGCGGCCTGGTCATTC CGGGTACAAAGGATGCAGCGGGTGTCAGGCAGGCTTCGGAGCAGAAGCCG GCGGAAGACGGTGCAGGCGAGGCTCTTCAAGTGCACAGTTTCGAAATTCC CAACGAAGCAGTCGAACCCGTCAAGGCGCGCTGTCAGGCTATGGGCTGTC CAGCATTGGAGGAGTATGATTTCCGAAATGATGAGATCAATCCCACCTTG GATATCGACTTGAAGCCGGCAGCACGAATTCGAAGCTACCAAGAAAAGAG TTTGAGTAAGATGTTCGGTAACGGACGTGCGAAGAGTGGAATTATCGTCT TGCCTTGTGGTGCCGGAAAAACGTTGGTGGGTATTACGGCGGGCTGCACG ATCAAGAAGGGGACAATTGTCTTGTGTACCAGTTCAATGTCTGTGGTGCA ATGGCGTAACGAGTTCTTGCGCTGGTCCAATATTGATCCCGGTGATATTG CGGTTTTCACCTCAGATAACAAGGAGAAATTCCGTCGATCGACTGGTATC ATCGTGTCAACCTACTCCATGGTGTCCCAGACGCGTGCTCGGTCGCATGA TGCGCAGAAGATGATGGATTGGATTCAGTCACGAGAGTGGGGTCTGATGA TTCTTGACGAGGTGCACGTCGTGCCTGCATCGATGTTCCGAAAGGTCACA TCGGCAATCGCATGTCAGAGTAAATTGGGATTGACGGCAACGCTGCTGCG AGAGGATGACAAGATCAAGGATCTGAACTTCCTGATTGGTCCCAAGTTGT ACGAAGCCAACTGGATGGAACTGGCCGAGCAAGGGCACATTGCCAAGGTT CAGTGCGCCGAGGTATGGTGTCCGATGACGACCGAATTCTACTCGGAGTA CATGAGAGAAAAGTCAAGAAAGGCTGCTCTTCTATACATTATGAACCCTC GGAAATTCCAAGCATGCCAGTTCCTGATCGACTACCACGAGAAGCGAGGT GACAAGGTCATTGTCTTTTCCGACAACGTTTACGCTCTTCAGCGGTATGC ACTCAAGCTGAACAAGGCCTATATCTACGGCGGTACTCCACAGAACGAGC GCATGCGCATTTTGGAGAATTTCCAGCACAATGAACAAGTCAATACCATC TTCCTCTCCAAGATCGGAGACACGTCGCTCGATCTGCCGGAAGCCACCTG TCTGATCCAGATCTCGTCGCATTACGGTTCCCGTCGTCAGGAAGCCCAAC GACTTGGTCGGATTCTGCGAGCCAAGCGTCGAAACGACGAGGGATTCAAC GCCTTCTTCTACTCGCTTGTGTCGAAAGACACAGATGAAATGTTCTACTC TTCCAAGCGACAGGCTTTCCTTGTCGACCAGGGCTACGCGTTCAAGGTCA TTACTCACCTGCAAGGCATCGAGAACCTGGAAGGGTTGGCGTACGCCACG CCCAGCGAACGCCGTGAGCTGCTGCAGGAGGTGATGTTACAGAACGAGAC TTCTGCCGAGGTAGAGCACGTCACGGACGATCTCTTCTCAGGACGTTCGG GCGGCCAGCGAAAGGGAGCAGTCAAGCGCAGTGCCGCGACACTCAGCGGC CTGGCCGGCGGTGAAGACATGGCGTATATCGAGTACAACAAGAGCCGGAA CAAGCAGCTGAAGGACAAGGTGGGCCATCACCCGCTGTTCCGGAAGCTGG AGCGGGAACGACTCAAGCGGAAGAAGGAGTTGGAGGATTTCATGCGGTAG ATGCCAATCAAACGCAAAGCTACGGATAGCGGTCGGTCAAGTAGAGCGTC GAAACGGCCCACACCTGTGCCGGATATCGGTAGTAGTGATGAATACTCAG ACTACGAGGAAGAAGTCAAGGATGATAACCTGAAAGGTGTCTTGGAGAAA TTCTCTCTCGAATCTTTTAGCAACAAGAAGAGCGCCGCCGTACAGAGACA GGACCCCGATTTCGGTTACAAGGACTTTTCCTCGCTATCGTTGAAACCCG ATCATGCGAACCGCCCGCTCTGGATCGATCCTCTTAAGGGAACTATTACC TTGGAGAGTTTCTCCCCTCTGGCACCCCAGGCGCAGGACTTCCTGACTAC TATCGCCGAACCGCTGTCGCGTCCGACCCATCTGCACGAATACCGATTGA CAGGGAACAGTTTGTATGCGGCTGTCTCGGTGGGTTTGCTGCCCCAGGAT ATCATCAACTTTCTAGATCGATTGTCGAAAACGCCGCTTCCGGATACCAT CAAGTCGTTCATTCTCGACTTCACGAAATCATACGGAAAGATCAAGGTCG TGCTGAAACATAATCGCTTCTTCGTGGAAAGTACCGATCCGGCGATGTTG CAGATGCTGCTGCAGGATGAAGTTATTGGTTCTCAGCGATTGAAAGGCAC GGAGGGCATTATTCAGCAGGCAGCCCCGAAAATGGGCGGCCTGGTCATTC CGGGTACAAAGGATGCAGCGGGTGTCAGGCAGGCTTCGGAGCAGAAGCCG GCGGAAGACGGTGCAGGCGAGGCTCTTCAAGTGCACAGTTTCGAAATTCC CAACGAAGCAGTCGAACCCGTCAAGGCGCGCTGTCAGGCTATGGGCTGTC CAGCATTGGAGGAGTATGATTTCCGAAATGATGAGATCAATCCCACCTTG GATATCGACTTGAAGCCGGCAGCACGAATTCGAAGCTACCAAGAAAAGAG TTTGAGTAAGATGTTCGGTAACGGACGTGCGAAGAGTGGAATTATCGTCT TGCCTTGTGGTGCCGGAAAAACGTTGGTGGGTATTACGGCGGGCTGCACG ATCAAGAAGGGGACAATTGTCTTGTGTACCAGTTCAATGTCTGTGGTGCA ATGGCGTAACGAGTTCTTGCGCTGGTCCAATATTGATCCCGGTGATATTG CGGTTTTCACCTCAGATAACAAGGAGAAATTCCGTCGATCGACTGGTATC ATCGTGTCAACCTACTCCATGGTGTCCCAGACGCGTGCTCGGTCGCATGA TGCGCAGAAGATGATGGATTGGATTCAGTCACGAGAGTGGGGTCTGATGA TTCTTGACGAGGTGCACGTCGTGCCTGCATCGATGTTCCGAAAGGTCACA TCGGCAATCGCATGTCAGAGTAAATTGGGATTGACGGCAACGCTGCTGCG AGAGGATGACAAGATCAAGGATCTGAACTTCCTGATTGGTCCCAAGTTGT ACGAAGCCAACTGGATGGAACTGGCCGAGCAAGGGCACATTGCCAAGGTT CAGTGCGCCGAGGTATGGTGTCCGATGACGACCGAATTCTACTCGGAGTA CATGAGAGAAAAGTCAAGAAAGGCTGCTCTTCTATACATTATGAACCCTC GGAAATTCCAAGCATGCCAGTTCCTGATCGACTACCACGAGAAGCGAGGT GACAAGGTCATTGTCTTTTCCGACAACGTTTACGCTCTTCAGCGGTATGC ACTCAAGCTGAACAAGGCCTATATCTACGGCGGTACTCCACAGAACGAGC GCATGCGCATTTTGGAGAATTTCCAGCACAATGAACAAGTCAATACCATC TTCCTCTCCAAGATCGGAGACACGTCGCTCGATCTGCCGGAAGCCACCTG TCTGATCCAGATCTCGTCGCATTACGGTTCCCGTCGTCAGGAAGCCCAAC GACTTGGTCGGATTCTGCGAGCCAAGCGTCGAAACGACGAGGGATTCAAC GCCTTCTTCTACTCGCTTGTGTCGAAAGACACAGATGAAATGTTCTACTC TTCCAAGCGACAGGCTTTCCTTGTCGACCAGGGCTACGCGTTCAAGGTCA TTACTCACCTGCAAGGCATCGAGAACCTGGAAGGGTTGGCGTACGCCACG CCCAGCGAACGCCGTGAGCTGCTGCAGGAGGTGATGTTACAGAACGAGAC TTCTGCCGAGGTAGAGCACGTCACGGACGATCTCTTCTCAGGACGTTCGG GCGGCCAGCGAAAGGGAGCAGTCAAGCGCAGTGCCGCGACACTCAGCGGC CTGGCCGGCGGTGAAGACATGGCGTATATCGAGTACAACAAGAGCCGGAA CAAGCAGCTGAAGGACAAGGTGGGCCATCACCCGCTGTTCCGGAAGCTGG AGCGGGAACGACTCAAGCGGAAGAAGGAGTTGGAGGATTTCATGCGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
| GO:0006289 | nucleotide-excision repair |
| GO:0006367 | transcription initiation from RNA polymerase II promoter |
Vocabulary: Molecular Function
| Term | Definition |
| GO:0003678 | DNA helicase activity |
| GO:0003677 | DNA binding |
| GO:0005524 | ATP binding |
| GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
| Note | BUSCO:EOG09260HSP |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR001161 |
| DBxref | InterPro:IPR032830 |
| DBxref | InterPro:IPR006935 |
| DBxref | InterPro:IPR032438 |
| DBxref | InterPro:IPR001650 |
| DBxref | InterPro:IPR014001 |
| DBxref | PFAM:PF04851 |
| DBxref | PFAM:PF13625 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF16203 |
| Product | DNA repair helicase RAD25 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:1280639..1283157 + |
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