You are here

Home

CAN33_1830-T1, CAN33_1830-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_1830-T1
Unique NameCAN33_1830-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1120203..1120951+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_1830-T1 ID=CAN33_1830-T1|Name=CAN33_1830-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=749bp|location=Sequence derived from alignment at NKJJ01000004.1:1120203..1120951+ (Aspergillus niger FDAARGOS_311)
ATGCCTGTTATCTCCCGACTAATCTCGATCGTCTTCCGCGTCGCGCAAAT
TGTTTGCGGTGCGGTATGTATTTCAATATGATCCATATAGATTATTCTAC
TCTATCTCGATTTATACGCTAACATATGGACTTGAATAGGTCGTCGCCGG
TATCATTGGTCACTACCTTGCCCAATACAGCGGTGACGCATGGCCTGAAG
CCCGCTGGATCTACACCGAAGTCGTCGCCGGGTTATCAATCCTCCTTGGC
CTGATATGGCTCATACCATTTTCCTCTGGATTTTTCTCCTGGCCATGTAC
GTTGTCGCATTTCCCCCCTCTACTCCTCCGCAATTGCTGACTCGGCCCCC
CTTTCCCGCAGTTGACGTCATCATCTCCCTTGCATGGTTTGCCGCATTCG
GTATCCTTGTCAACGCCATTCACAAGTTGAGCTGCGGCAGTATCTGGCAC
TGGGGTGGTCTCTACCGCAACAATACTTGCAGTCGCTGGAAGGCCGCTGA
AGCGTTCAGCTTCATCTCGGCTATTGTCTGGCTTGCCTCGGCGCTTGTGG
TATGTTCTCATAACCCCCTGCTGGCTATTGATGCATACTGACGATCGTGA
TACAGGGTCTTTGGTTCACTTTCCGTGTTAGGAAGGAAAGCACTGCCCCT
ACCTAGTAAGTCACACCATCACCGTCTTTGTGAGAACCTCGACACTAATA
AGCTCGCATCAGTGGTCGCCGTCGCTTCTTCGGTCGCTCCGCCGTGTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000004.1:1120203..1120951+

>CAN33_1830-T1 ID=CAN33_1830-T1|Name=CAN33_1830-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2475bp|location=Sequence derived from alignment at NKJJ01000004.1:1120203..1120951+ (Aspergillus niger FDAARGOS_311)
ATGCCTGTTATCTCCCGACTAATCTCGATCGTCTTCCGCGTCGCGCAAAT
TGTTTGCGGTGCGGTCGTCGCCGGTATCATTGGTCACTACCTTGCCCAAT
ACAGCGGTGACGCATGGCCTGAAGCCCGCTGGATCTACACCGAAGTCGTC
GCCGGGTTATCAATCCTCCTTGGCCTGATATGGCTCATACCATTTTCCTC
TGGATTTTTCTCCTGGCCATTTGACGTCATCATCTCCCTTGCATGGTTTG
CCGCATTCGGTATCCTTGTCAACGCCATTCACAAGTTGAGCTGCGGCAGT
ATCTGGCACTGGGGTGGTCTCTACCGCAACAATACTTGCAGTCGCTGGAA
GGCCGCTGAAGCGTTCAGCTTCATCTCGGCTATTGTCTGGCTTGCCTCGG
CGCTTGTGGGTCTTTGGTTCACTTTCCGTGTTAGGAAGGAAAGCACTGCC
CCTACCTATGGTCGCCGTCGCTTCTTCGGTCGCTCCGCCGTGTAAATGCC
TGTTATCTCCCGACTAATCTCGATCGTCTTCCGCGTCGCGCAAATTGTTT
GCGGTGCGGTCGTCGCCGGTATCATTGGTCACTACCTTGCCCAATACAGC
GGTGACGCATGGCCTGAAGCCCGCTGGATCTACACCGAAGTCGTCGCCGG
GTTATCAATCCTCCTTGGCCTGATATGGCTCATACCATTTTCCTCTGGAT
TTTTCTCCTGGCCATTTGACGTCATCATCTCCCTTGCATGGTTTGCCGCA
TTCGGTATCCTTGTCAACGCCATTCACAAGTTGAGCTGCGGCAGTATCTG
GCACTGGGGTGGTCTCTACCGCAACAATACTTGCAGTCGCTGGAAGGCCG
CTGAAGCGTTCAGCTTCATCTCGGCTATTGTCTGGCTTGCCTCGGCGCTT
GTGGGTCTTTGGTTCACTTTCCGTGTTAGGAAGGAAAGCACTGCCCCTAC
CTATGGTCGCCGTCGCTTCTTCGGTCGCTCCGCCGTGTAAATGCCTGTTA
TCTCCCGACTAATCTCGATCGTCTTCCGCGTCGCGCAAATTGTTTGCGGT
GCGGTCGTCGCCGGTATCATTGGTCACTACCTTGCCCAATACAGCGGTGA
CGCATGGCCTGAAGCCCGCTGGATCTACACCGAAGTCGTCGCCGGGTTAT
CAATCCTCCTTGGCCTGATATGGCTCATACCATTTTCCTCTGGATTTTTC
TCCTGGCCATTTGACGTCATCATCTCCCTTGCATGGTTTGCCGCATTCGG
TATCCTTGTCAACGCCATTCACAAGTTGAGCTGCGGCAGTATCTGGCACT
GGGGTGGTCTCTACCGCAACAATACTTGCAGTCGCTGGAAGGCCGCTGAA
GCGTTCAGCTTCATCTCGGCTATTGTCTGGCTTGCCTCGGCGCTTGTGGG
TCTTTGGTTCACTTTCCGTGTTAGGAAGGAAAGCACTGCCCCTACCTATG
GTCGCCGTCGCTTCTTCGGTCGCTCCGCCGTGTAAATGCCTGTTATCTCC
CGACTAATCTCGATCGTCTTCCGCGTCGCGCAAATTGTTTGCGGTGCGGT
CGTCGCCGGTATCATTGGTCACTACCTTGCCCAATACAGCGGTGACGCAT
GGCCTGAAGCCCGCTGGATCTACACCGAAGTCGTCGCCGGGTTATCAATC
CTCCTTGGCCTGATATGGCTCATACCATTTTCCTCTGGATTTTTCTCCTG
GCCATTTGACGTCATCATCTCCCTTGCATGGTTTGCCGCATTCGGTATCC
TTGTCAACGCCATTCACAAGTTGAGCTGCGGCAGTATCTGGCACTGGGGT
GGTCTCTACCGCAACAATACTTGCAGTCGCTGGAAGGCCGCTGAAGCGTT
CAGCTTCATCTCGGCTATTGTCTGGCTTGCCTCGGCGCTTGTGGGTCTTT
GGTTCACTTTCCGTGTTAGGAAGGAAAGCACTGCCCCTACCTATGGTCGC
CGTCGCTTCTTCGGTCGCTCCGCCGTGTAAATGCCTGTTATCTCCCGACT
AATCTCGATCGTCTTCCGCGTCGCGCAAATTGTTTGCGGTGCGGTCGTCG
CCGGTATCATTGGTCACTACCTTGCCCAATACAGCGGTGACGCATGGCCT
GAAGCCCGCTGGATCTACACCGAAGTCGTCGCCGGGTTATCAATCCTCCT
TGGCCTGATATGGCTCATACCATTTTCCTCTGGATTTTTCTCCTGGCCAT
TTGACGTCATCATCTCCCTTGCATGGTTTGCCGCATTCGGTATCCTTGTC
AACGCCATTCACAAGTTGAGCTGCGGCAGTATCTGGCACTGGGGTGGTCT
CTACCGCAACAATACTTGCAGTCGCTGGAAGGCCGCTGAAGCGTTCAGCT
TCATCTCGGCTATTGTCTGGCTTGCCTCGGCGCTTGTGGGTCTTTGGTTC
ACTTTCCGTGTTAGGAAGGAAAGCACTGCCCCTACCTATGGTCGCCGTCG
CTTCTTCGGTCGCTCCGCCGTGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_1830CAN33_1830Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1830-T1CAN33_1830-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1830-T1.exon1CAN33_1830-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_1830-T1.exon2CAN33_1830-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_1830-T1.exon3CAN33_1830-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_1830-T1.exon4CAN33_1830-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_1830-T1.exon5CAN33_1830-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1830-T1.cdsCAN33_1830-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR008253
DBxrefPFAM:PF01284
ProductMembrane-associating domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1120203..1120951 +
Powered by Drupal