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CAN33_18355-T1, CAN33_18355-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_18355-T1
Unique NameCAN33_18355-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1363007..1365201-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_18355-T1 ID=CAN33_18355-T1|Name=CAN33_18355-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2195bp|location=Sequence derived from alignment at NKJJ01000011.1:1363007..1365201- (Aspergillus niger FDAARGOS_311)
ATGTCGCAGTTTAAGCTTAACTTGGCCACCAAGGCCAACCAGGCCTCTTT
GCTTCCAGTCCTCCTGGTTGCCACTTCCATCAACGAGGCTCGCCCTACTC
CTGTCATCGCCATCAACTTTGAGGATGCGGCTGTCCTCTCCGAAGGCGAG
AAGGCTATCGTTCAGTTCACAGGTGCCAGCGGTGCTCCCGCCTATGGAAC
TGACAACGCCATCAAGGAGCTGCGCGCCAGCTTCCCCTTCCTCAACGGAA
AGGATGAGAAGTCTGTAAGTGATTCCCGCTTCGTCTTCATTGCGACTCTG
GCTGATGAAGGCTTCTCTAGGAGAACGAATGGCTTTCCCAGCTCGAGTCC
TTCACCACCCTTGACTTCAAGGCTCTCGACCCTCTGCTTCAGCGCTTGAA
CACCCACCTTCTCCTCCGTTCCTTCATGGTCGGTTACTCGCTCTCCACCC
CCGACATTGCTCTGTGGGGTGCCCTTCGTGGCAACCGCGTTGCCATCTCG
GCCATCCGCAAGGGAGCCCTTGTCAACCTGACTCGTTGGTTCAACTTCCT
GGATGAGCTCTGCCCCTGGGCTAGCGCTGCTCTGGAGAGCCTCAATGCTT
CCGCCAAGGAGAAGAAGGCGGCCAAGGCCAAGGAGGGTGCCAGCTACGAC
ATTGCTCTCCAGAACACTGACAAGGGTGTTGTTACCCGTTTCCCTCCTGA
GCCTTCTGGATACCTGCACATCGGACACGCCAAGGCTGCTCTGCTGAACG
ACTATTTCGCGCACGAGAAGTACAACGGCACCCTGCTGGTGCGCTTTGAC
GACACCAACCCCTCGAACGAGAAGCAGGAGTTCCAGGATGCTATCATGGA
AGACTTGGCCCTGATGGGCATCAAGCCGGACAGGATGAGCTACTCCAGTG
ACTACTTTGACCAGATCTACGAGTACGGTCTGAAGATCATCCGCGAGGGC
AACGCCTACGCTGATGACACCGACAAGGAGACCATGGCTTCCCAGAGAAT
GAACGGCGAGCCCAGCAAGCGCCGTGACGCTTCCGTGGAGGAGAACCTTG
CCCGGTTCGAGGAGATGAAGCAGGGTACTCCCGAGGGTCTCAGATGGTGC
ATCCGCGCCAAGATGTCCGTCGACAACCCCAACAAGGCCATGCGTGACCC
CGTCATCTACCGCTGCAACCCTACTCCTCACCACCGCACCGGTACGAAGT
GGAAGATCTACCCGACCTACGACCTGTGCTGCCCCATCTTGGACTCGATC
GAGGGCGTTACCCACGCTCTTAGAACCATTGAGTACCGTGATCGGAACCC
TCAGTACCAGTGGTTCTTGGACACTCTCGGACTCCGCCACGTGCAGATCT
GGGATTTTGCCCGCATGAACTTCATCCGGACTCTGCTCTCGAAGCGTAAG
CTCACTAAGCTGGTCGACCAGGGCGTTGTCTGGGGCTGGGATGACCCTCG
TTTCCCGACGATCAGAGGTATTCGCAGAAGGGGTATGACTGTGCCGGCTC
TCCGCGAGTTCATTCTCAAGCAGGGACCCAGCAAGAACATCACCAACCTG
GACTGGACCCTCATCTGGGCCACCAACAAGAAGTACATTGACCCCGTTGC
GCCGCGCCACACTGCCCTCATGAAGAAGGATCTTGTCAAGGCTGTCATCA
AGGGCGCCCCTGCTCCTTACACTGAGGACAAGCCTAAGCACAACAAGAAC
CCTGAAGTTGGCCAGAAGAAGGTCACCTTCAGCGGCTCGGTTCTCTTCGA
CCAGGAGGATGCCAAGACCTTCAAGCAGGACGAGGAGATCACCCTCATGG
CCTGGGGTAATGCCATTGTCCGGAAGATTGAGAAGGACTCCGCGGGTGTT
GTGCAGTCCCTGGAGCTTGATCTGCACCTGGAGGGCGACTTCAAGAAGAC
CGAGAAGAAGGTCACCTGGCTGTCGGCTGACCAGGAACTGGTCCCCGTGG
AGCTGGTCGACTTCGACTACCTCCTCAACAAGGACTCCCTTCAGGAGGAC
GATGCTTTGGAGGACGTGCTGAACAAGAACACCGAGTTCCGTGAGGACGC
TGTGGCTGACTGCAACGTGGCCGAACTGCGTGAGGGCGACATCATCCAGT
TCGAGCGCAAGGGCTACTTCCGCTGCGACCGCCCCTACGCTCCTGGCAAG
CCGGCGGTGTTGTTCAACATCCCCACCGGCAAGACTGGCAAATAG
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Coding sequence (CDS) from alignment at NKJJ01000011.1:1363007..1365201-

>CAN33_18355-T1 ID=CAN33_18355-T1|Name=CAN33_18355-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4278bp|location=Sequence derived from alignment at NKJJ01000011.1:1363007..1365201- (Aspergillus niger FDAARGOS_311)
GAGAACGAATGGCTTTCCCAGCTCGAGTCCTTCACCACCCTTGACTTCAA
GGCTCTCGACCCTCTGCTTCAGCGCTTGAACACCCACCTTCTCCTCCGTT
CCTTCATGGTCGGTTACTCGCTCTCCACCCCCGACATTGCTCTGTGGGGT
GCCCTTCGTGGCAACCGCGTTGCCATCTCGGCCATCCGCAAGGGAGCCCT
TGTCAACCTGACTCGTTGGTTCAACTTCCTGGATGAGCTCTGCCCCTGGG
CTAGCGCTGCTCTGGAGAGCCTCAATGCTTCCGCCAAGGAGAAGAAGGCG
GCCAAGGCCAAGGAGGGTGCCAGCTACGACATTGCTCTCCAGAACACTGA
CAAGGGTGTTGTTACCCGTTTCCCTCCTGAGCCTTCTGGATACCTGCACA
TCGGACACGCCAAGGCTGCTCTGCTGAACGACTATTTCGCGCACGAGAAG
TACAACGGCACCCTGCTGGTGCGCTTTGACGACACCAACCCCTCGAACGA
GAAGCAGGAGTTCCAGGATGCTATCATGGAAGACTTGGCCCTGATGGGCA
TCAAGCCGGACAGGATGAGCTACTCCAGTGACTACTTTGACCAGATCTAC
GAGTACGGTCTGAAGATCATCCGCGAGGGCAACGCCTACGCTGATGACAC
CGACAAGGAGACCATGGCTTCCCAGAGAATGAACGGCGAGCCCAGCAAGC
GCCGTGACGCTTCCGTGGAGGAGAACCTTGCCCGGTTCGAGGAGATGAAG
CAGGGTACTCCCGAGGGTCTCAGATGGTGCATCCGCGCCAAGATGTCCGT
CGACAACCCCAACAAGGCCATGCGTGACCCCGTCATCTACCGCTGCAACC
CTACTCCTCACCACCGCACCGGTACGAAGTGGAAGATCTACCCGACCTAC
GACCTGTGCTGCCCCATCTTGGACTCGATCGAGGGCGTTACCCACGCTCT
TAGAACCATTGAGTACCGTGATCGGAACCCTCAGTACCAGTGGTTCTTGG
ACACTCTCGGACTCCGCCACGTGCAGATCTGGGATTTTGCCCGCATGAAC
TTCATCCGGACTCTGCTCTCGAAGCGTAAGCTCACTAAGCTGGTCGACCA
GGGCGTTGTCTGGGGCTGGGATGACCCTCGTTTCCCGACGATCAGAGGTA
TTCGCAGAAGGGGTATGACTGTGCCGGCTCTCCGCGAGTTCATTCTCAAG
CAGGGACCCAGCAAGAACATCACCAACCTGGACTGGACCCTCATCTGGGC
CACCAACAAGAAGTACATTGACCCCGTTGCGCCGCGCCACACTGCCCTCA
TGAAGAAGGATCTTGTCAAGGCTGTCATCAAGGGCGCCCCTGCTCCTTAC
ACTGAGGACAAGCCTAAGCACAACAAGAACCCTGAAGTTGGCCAGAAGAA
GGTCACCTTCAGCGGCTCGGTTCTCTTCGACCAGGAGGATGCCAAGACCT
TCAAGCAGGACGAGGAGATCACCCTCATGGCCTGGGGTAATGCCATTGTC
CGGAAGATTGAGAAGGACTCCGCGGGTGTTGTGCAGTCCCTGGAGCTTGA
TCTGCACCTGGAGGGCGACTTCAAGAAGACCGAGAAGAAGGTCACCTGGC
TGTCGGCTGACCAGGAACTGGTCCCCGTGGAGCTGGTCGACTTCGACTAC
CTCCTCAACAAGGACTCCCTTCAGGAGGACGATGCTTTGGAGGACGTGCT
GAACAAGAACACCGAGTTCCGTGAGGACGCTGTGGCTGACTGCAACGTGG
CCGAACTGCGTGAGGGCGACATCATCCAGTTCGAGCGCAAGGGCTACTTC
CGCTGCGACCGCCCCTACGCTCCTGGCAAGCCGGCGGTGTTGTTCAACAT
CCCCACCGGCAAGACTGGCAAATAGATGTCGCAGTTTAAGCTTAACTTGG
CCACCAAGGCCAACCAGGCCTCTTTGCTTCCAGTCCTCCTGGTTGCCACT
TCCATCAACGAGGCTCGCCCTACTCCTGTCATCGCCATCAACTTTGAGGA
TGCGGCTGTCCTCTCCGAAGGCGAGAAGGCTATCGTTCAGTTCACAGGTG
CCAGCGGTGCTCCCGCCTATGGAACTGACAACGCCATCAAGGAGCTGCGC
GCCAGCTTCCCCTTCCTCAACGGAAAGGATGAGAAGTCTGAGAACGAATG
GCTTTCCCAGCTCGAGTCCTTCACCACCCTTGACTTCAAGGCTCTCGACC
CTCTGCTTCAGCGCTTGAACACCCACCTTCTCCTCCGTTCCTTCATGGTC
GGTTACTCGCTCTCCACCCCCGACATTGCTCTGTGGGGTGCCCTTCGTGG
CAACCGCGTTGCCATCTCGGCCATCCGCAAGGGAGCCCTTGTCAACCTGA
CTCGTTGGTTCAACTTCCTGGATGAGCTCTGCCCCTGGGCTAGCGCTGCT
CTGGAGAGCCTCAATGCTTCCGCCAAGGAGAAGAAGGCGGCCAAGGCCAA
GGAGGGTGCCAGCTACGACATTGCTCTCCAGAACACTGACAAGGGTGTTG
TTACCCGTTTCCCTCCTGAGCCTTCTGGATACCTGCACATCGGACACGCC
AAGGCTGCTCTGCTGAACGACTATTTCGCGCACGAGAAGTACAACGGCAC
CCTGCTGGTGCGCTTTGACGACACCAACCCCTCGAACGAGAAGCAGGAGT
TCCAGGATGCTATCATGGAAGACTTGGCCCTGATGGGCATCAAGCCGGAC
AGGATGAGCTACTCCAGTGACTACTTTGACCAGATCTACGAGTACGGTCT
GAAGATCATCCGCGAGGGCAACGCCTACGCTGATGACACCGACAAGGAGA
CCATGGCTTCCCAGAGAATGAACGGCGAGCCCAGCAAGCGCCGTGACGCT
TCCGTGGAGGAGAACCTTGCCCGGTTCGAGGAGATGAAGCAGGGTACTCC
CGAGGGTCTCAGATGGTGCATCCGCGCCAAGATGTCCGTCGACAACCCCA
ACAAGGCCATGCGTGACCCCGTCATCTACCGCTGCAACCCTACTCCTCAC
CACCGCACCGGTACGAAGTGGAAGATCTACCCGACCTACGACCTGTGCTG
CCCCATCTTGGACTCGATCGAGGGCGTTACCCACGCTCTTAGAACCATTG
AGTACCGTGATCGGAACCCTCAGTACCAGTGGTTCTTGGACACTCTCGGA
CTCCGCCACGTGCAGATCTGGGATTTTGCCCGCATGAACTTCATCCGGAC
TCTGCTCTCGAAGCGTAAGCTCACTAAGCTGGTCGACCAGGGCGTTGTCT
GGGGCTGGGATGACCCTCGTTTCCCGACGATCAGAGGTATTCGCAGAAGG
GGTATGACTGTGCCGGCTCTCCGCGAGTTCATTCTCAAGCAGGGACCCAG
CAAGAACATCACCAACCTGGACTGGACCCTCATCTGGGCCACCAACAAGA
AGTACATTGACCCCGTTGCGCCGCGCCACACTGCCCTCATGAAGAAGGAT
CTTGTCAAGGCTGTCATCAAGGGCGCCCCTGCTCCTTACACTGAGGACAA
GCCTAAGCACAACAAGAACCCTGAAGTTGGCCAGAAGAAGGTCACCTTCA
GCGGCTCGGTTCTCTTCGACCAGGAGGATGCCAAGACCTTCAAGCAGGAC
GAGGAGATCACCCTCATGGCCTGGGGTAATGCCATTGTCCGGAAGATTGA
GAAGGACTCCGCGGGTGTTGTGCAGTCCCTGGAGCTTGATCTGCACCTGG
AGGGCGACTTCAAGAAGACCGAGAAGAAGGTCACCTGGCTGTCGGCTGAC
CAGGAACTGGTCCCCGTGGAGCTGGTCGACTTCGACTACCTCCTCAACAA
GGACTCCCTTCAGGAGGACGATGCTTTGGAGGACGTGCTGAACAAGAACA
CCGAGTTCCGTGAGGACGCTGTGGCTGACTGCAACGTGGCCGAACTGCGT
GAGGGCGACATCATCCAGTTCGAGCGCAAGGGCTACTTCCGCTGCGACCG
CCCCTACGCTCCTGGCAAGCCGGCGGTGTTGTTCAACATCCCCACCGGCA
AGACTGGCAAATAGATGTCGCAGTTTAAGCTTAACTTGGCCACCAAGGCC
AACCAGGCCTCTTTGCTTCCAGTCCTCCTGGTTGCCACTTCCATCAACGA
GGCTCGCCCTACTCCTGTCATCGCCATCAACTTTGAGGATGCGGCTGTCC
TCTCCGAAGGCGAGAAGGCTATCGTTCAGTTCACAGGTGCCAGCGGTGCT
CCCGCCTATGGAACTGACAACGCCATCAAGGAGCTGCGCGCCAGCTTCCC
CTTCCTCAACGGAAAGGATGAGAAGTCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006424glutamyl-tRNA aminoacylation
GO:0006418tRNA aminoacylation for protein translation
GO:0043039tRNA aminoacylation
Vocabulary: Molecular Function
TermDefinition
GO:0004818glutamate-tRNA ligase activity
GO:0005524ATP binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0000166nucleotide binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_18355CAN33_18355Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18355-T1CAN33_18355-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18355-T1.cdsCAN33_18355-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18355-T1.exon2CAN33_18355-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_18355-T1.exon1CAN33_18355-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR011035
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR001412
DBxrefInterPro:IPR004526
DBxrefInterPro:IPR020059
DBxrefInterPro:IPR020058
DBxrefInterPro:IPR020056
DBxrefInterPro:IPR014729
DBxrefInterPro:IPR000924
DBxrefPFAM:PF03950
DBxrefPFAM:PF00749
Productglutamate--tRNA ligase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1363007..1365201 -
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