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CAN33_18360-T1, CAN33_18360-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_18360-T1
Unique NameCAN33_18360-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1365423..1366443+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_18360-T1 ID=CAN33_18360-T1|Name=CAN33_18360-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1021bp|location=Sequence derived from alignment at NKJJ01000011.1:1365423..1366443+ (Aspergillus niger FDAARGOS_311)
ATGGCTTCCTCCTACAGCTCCCTCATGCCCTCTGCGGCACGGGGAATCTT
GTCGTCATGTCGCCCTGCTCTTCGCCCGAGCCCAATTGTGCCTATTTTGC
CCAGCCTGCAACAGGTGCGCACCGCTGCCCAGGCGCGCAAGATGAAGGGA
GACAAGACCGCCAAGAGAAAGAAGGGTCCGAGGGAGTTCAAGCAGAAGGA
TCTCAAGGACATGCAACAGTTCGCACTGTGTGATGCCATGAGGTTTGTGT
GGTCATCGCTGTGTCTCAGTCGACTTTCCCACTGATTGCTTTGGTCTTCA
CCGCAGGTATCTCCGTGCATTCGAAGTTGGCCGCGAGCCAACCTCTTCCA
AATACGAGGTCCACGTTCGCCTGAAGACGAGGAGAGACGGTCCCGTCATT
CGCAACATGCTTCGATTCCCCCATTCAGTCCAAACCGAGTCCCGAATTTG
CGTCGTGTGCCCTCCCGGAACCCGCCATGAGAAGGAAGCTCGTGCGGCTG
GAGCAGTCTTGGTGGGTGAGCAGGAGGTCTTTGATGCCGTGAAGGCCGGC
AAGATCGAGTTCGACCGCTGTCTCTGCCACCCGGATAGTTTGGATGCTTT
GAACAAGGCTGGCCTGGGTCGGATCCTCGGTCCCAGAGGCCTGATGCCCA
GCGTCAAGACGGGTACTGTGGTCGAAGATATCGCCGTGCGTGTGGAGATG
CTGCGTGGTGGTACTGTTTACCGTGAGCGTGACGCCGTCATTCGTGTCCC
CGTTGGACAGCTTGGTTTCACCCCCGAGCAATTGCGTGACAACCTGCGCG
CAACGATCGACCAGATCAAGAAGGATGCGGCCGGTCTTAATGACCGCATA
ACCAAGGAGGTGTACGAAGTGGTAAGTCGCCGACTTGCGTTGCGCCTGCA
ATCGGCATCTTTTACTAACGTTCCTTAGGTCCTGAGCTCGACCAACGGTC
CCGGCTTCAGTCTGAATGGAGAGTTCAGGTCGGAGACCTCTCCCGAATCT
TCCGCTTTGCAGGGCGTGTAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:1365423..1366443+

>CAN33_18360-T1 ID=CAN33_18360-T1|Name=CAN33_18360-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2700bp|location=Sequence derived from alignment at NKJJ01000011.1:1365423..1366443+ (Aspergillus niger FDAARGOS_311)
ATGGCTTCCTCCTACAGCTCCCTCATGCCCTCTGCGGCACGGGGAATCTT
GTCGTCATGTCGCCCTGCTCTTCGCCCGAGCCCAATTGTGCCTATTTTGC
CCAGCCTGCAACAGGTGCGCACCGCTGCCCAGGCGCGCAAGATGAAGGGA
GACAAGACCGCCAAGAGAAAGAAGGGTCCGAGGGAGTTCAAGCAGAAGGA
TCTCAAGGACATGCAACAGTTCGCACTGTGTGATGCCATGAGGTATCTCC
GTGCATTCGAAGTTGGCCGCGAGCCAACCTCTTCCAAATACGAGGTCCAC
GTTCGCCTGAAGACGAGGAGAGACGGTCCCGTCATTCGCAACATGCTTCG
ATTCCCCCATTCAGTCCAAACCGAGTCCCGAATTTGCGTCGTGTGCCCTC
CCGGAACCCGCCATGAGAAGGAAGCTCGTGCGGCTGGAGCAGTCTTGGTG
GGTGAGCAGGAGGTCTTTGATGCCGTGAAGGCCGGCAAGATCGAGTTCGA
CCGCTGTCTCTGCCACCCGGATAGTTTGGATGCTTTGAACAAGGCTGGCC
TGGGTCGGATCCTCGGTCCCAGAGGCCTGATGCCCAGCGTCAAGACGGGT
ACTGTGGTCGAAGATATCGCCGTGCGTGTGGAGATGCTGCGTGGTGGTAC
TGTTTACCGTGAGCGTGACGCCGTCATTCGTGTCCCCGTTGGACAGCTTG
GTTTCACCCCCGAGCAATTGCGTGACAACCTGCGCGCAACGATCGACCAG
ATCAAGAAGGATGCGGCCGGTCTTAATGACCGCATAACCAAGGAGGTGTA
CGAAGTGGTCCTGAGCTCGACCAACGGTCCCGGCTTCAGTCTGAATGGAG
AGTTCAGGTCGGAGACCTCTCCCGAATCTTCCGCTTTGCAGGGCGTGTAA
ATGGCTTCCTCCTACAGCTCCCTCATGCCCTCTGCGGCACGGGGAATCTT
GTCGTCATGTCGCCCTGCTCTTCGCCCGAGCCCAATTGTGCCTATTTTGC
CCAGCCTGCAACAGGTGCGCACCGCTGCCCAGGCGCGCAAGATGAAGGGA
GACAAGACCGCCAAGAGAAAGAAGGGTCCGAGGGAGTTCAAGCAGAAGGA
TCTCAAGGACATGCAACAGTTCGCACTGTGTGATGCCATGAGGTATCTCC
GTGCATTCGAAGTTGGCCGCGAGCCAACCTCTTCCAAATACGAGGTCCAC
GTTCGCCTGAAGACGAGGAGAGACGGTCCCGTCATTCGCAACATGCTTCG
ATTCCCCCATTCAGTCCAAACCGAGTCCCGAATTTGCGTCGTGTGCCCTC
CCGGAACCCGCCATGAGAAGGAAGCTCGTGCGGCTGGAGCAGTCTTGGTG
GGTGAGCAGGAGGTCTTTGATGCCGTGAAGGCCGGCAAGATCGAGTTCGA
CCGCTGTCTCTGCCACCCGGATAGTTTGGATGCTTTGAACAAGGCTGGCC
TGGGTCGGATCCTCGGTCCCAGAGGCCTGATGCCCAGCGTCAAGACGGGT
ACTGTGGTCGAAGATATCGCCGTGCGTGTGGAGATGCTGCGTGGTGGTAC
TGTTTACCGTGAGCGTGACGCCGTCATTCGTGTCCCCGTTGGACAGCTTG
GTTTCACCCCCGAGCAATTGCGTGACAACCTGCGCGCAACGATCGACCAG
ATCAAGAAGGATGCGGCCGGTCTTAATGACCGCATAACCAAGGAGGTGTA
CGAAGTGGTCCTGAGCTCGACCAACGGTCCCGGCTTCAGTCTGAATGGAG
AGTTCAGGTCGGAGACCTCTCCCGAATCTTCCGCTTTGCAGGGCGTGTAA
ATGGCTTCCTCCTACAGCTCCCTCATGCCCTCTGCGGCACGGGGAATCTT
GTCGTCATGTCGCCCTGCTCTTCGCCCGAGCCCAATTGTGCCTATTTTGC
CCAGCCTGCAACAGGTGCGCACCGCTGCCCAGGCGCGCAAGATGAAGGGA
GACAAGACCGCCAAGAGAAAGAAGGGTCCGAGGGAGTTCAAGCAGAAGGA
TCTCAAGGACATGCAACAGTTCGCACTGTGTGATGCCATGAGGTATCTCC
GTGCATTCGAAGTTGGCCGCGAGCCAACCTCTTCCAAATACGAGGTCCAC
GTTCGCCTGAAGACGAGGAGAGACGGTCCCGTCATTCGCAACATGCTTCG
ATTCCCCCATTCAGTCCAAACCGAGTCCCGAATTTGCGTCGTGTGCCCTC
CCGGAACCCGCCATGAGAAGGAAGCTCGTGCGGCTGGAGCAGTCTTGGTG
GGTGAGCAGGAGGTCTTTGATGCCGTGAAGGCCGGCAAGATCGAGTTCGA
CCGCTGTCTCTGCCACCCGGATAGTTTGGATGCTTTGAACAAGGCTGGCC
TGGGTCGGATCCTCGGTCCCAGAGGCCTGATGCCCAGCGTCAAGACGGGT
ACTGTGGTCGAAGATATCGCCGTGCGTGTGGAGATGCTGCGTGGTGGTAC
TGTTTACCGTGAGCGTGACGCCGTCATTCGTGTCCCCGTTGGACAGCTTG
GTTTCACCCCCGAGCAATTGCGTGACAACCTGCGCGCAACGATCGACCAG
ATCAAGAAGGATGCGGCCGGTCTTAATGACCGCATAACCAAGGAGGTGTA
CGAAGTGGTCCTGAGCTCGACCAACGGTCCCGGCTTCAGTCTGAATGGAG
AGTTCAGGTCGGAGACCTCTCCCGAATCTTCCGCTTTGCAGGGCGTGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_18360CAN33_18360Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18360-T1.exon1CAN33_18360-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_18360-T1.exon2CAN33_18360-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_18360-T1.exon3CAN33_18360-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18360-T1.cdsCAN33_18360-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18360-T1CAN33_18360-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092643Y5
DBxrefInterPro:IPR023674
DBxrefInterPro:IPR016095
DBxrefInterPro:IPR028364
DBxrefPFAM:PF00687
ProductRibosomal L1p/L10e family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1365423..1366443 +
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