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CAN33_18375-T1, CAN33_18375-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_18375-T1
Unique NameCAN33_18375-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1369766..1370950-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_18375-T1 ID=CAN33_18375-T1|Name=CAN33_18375-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1185bp|location=Sequence derived from alignment at NKJJ01000011.1:1369766..1370950- (Aspergillus niger FDAARGOS_311)
ATGCCTCTCGACGGGGTGAAGAATGTTGTGCTGGTGAGTATTACTCTTCA
TTTACCTGAGCTCCAGCTCCAAACATCATTGCGACAACCCCTCCTCTCTT
ATCGATAACACCGCGCAACTGCGCACAGGATGGAAGGATGGCCACACCTA
CACATACAATGCGCGCACATCCTATCTACCTCTATCCATCTATACACCTT
CCAATACATTGTCCAGAGAGAAGCTAACAAGCTATCTCCCAGGTCCTCTC
GGGCAAAGGCGGCGTCGGCAAATCCAGCGTAACCCTGCAACTCGCCCTCG
CGCTCACCCTGCAAGGCAAATCCGTTGGTATCCTGGACATCGATCTCACC
GGCCCTTCAATCCCACGATTAGTCGGTCTCGAAGACGCAAAAATTACCCA
AGCGCCAGGCGGTTGGCTTCCTGTTCCCGTTCACCCTTCCACCATCATCA
CCACACCCAATGCCTCCTCCACCTCACAACCAGATAATACAACAACAACG
GCAACAGAAACAGAAGGTGGACGCGCAATAAAACACGGCTCTCTCCGCTG
CATGTCCCTCGGCTTCCTTTTACGTTCCCGGTCCGATGCCGTAATCTGGC
GCGGGCCCAAAAAGACAGCCATGATCCGCCAATTCCTCTCCGATGTGCTG
TGGAATGAAACTGATTACTTGCTTATTGATACGCCTCCCGGAACTAGTGA
TGAGCATATTGCTCTTGCGGAGCAGCTCTTGACGCTTTGTACAATCGATG
CTTCCTCTGCAACTGGAATGCCTCGACTGGCTGGTGCGGTACTGGTCACT
ACACCACAGGCGGTAGCAACGTCTGATGTACGGAAGGAGGTGAATTTCTG
CGTTAAGACGAGGATTCCGATGCTGGGGGTGGTGGAGAATATGTCTGGTT
ATACGTGTCCGTGCTGTGGGGAGGTGACGAACCTGTTCTCGAGTGGTGGG
GGGCAGGTTCTGGCAGAAGAGATGGGTGTAAGGTTTTTGGGAAAGGTGCC
CGTTGACGTTGGGTTTGGGGAGTTGGTGGAGGGGAAGATTGGTGGGGAGG
AGGATAGTGAGGATGAGGATGAGGATACTAATGGGGAGAAGAAGGAGGAA
GAAGAGAAGGATGAGAGGCCGCTAGTGGAAAGGTATCGGGAATGTTGGTC
GTATGCGCGGTTCGAGGACTTTTCGAAGACGTTGA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:1369766..1370950-

>CAN33_18375-T1 ID=CAN33_18375-T1|Name=CAN33_18375-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2430bp|location=Sequence derived from alignment at NKJJ01000011.1:1369766..1370950- (Aspergillus niger FDAARGOS_311)
ACGTTGAGTCCTCTCGGGCAAAGGCGGCGTCGGCAAATCCAGCGTAACCC
TGCAACTCGCCCTCGCGCTCACCCTGCAAGGCAAATCCGTTGGTATCCTG
GACATCGATCTCACCGGCCCTTCAATCCCACGATTAGTCGGTCTCGAAGA
CGCAAAAATTACCCAAGCGCCAGGCGGTTGGCTTCCTGTTCCCGTTCACC
CTTCCACCATCATCACCACACCCAATGCCTCCTCCACCTCACAACCAGAT
AATACAACAACAACGGCAACAGAAACAGAAGGTGGACGCGCAATAAAACA
CGGCTCTCTCCGCTGCATGTCCCTCGGCTTCCTTTTACGTTCCCGGTCCG
ATGCCGTAATCTGGCGCGGGCCCAAAAAGACAGCCATGATCCGCCAATTC
CTCTCCGATGTGCTGTGGAATGAAACTGATTACTTGCTTATTGATACGCC
TCCCGGAACTAGTGATGAGCATATTGCTCTTGCGGAGCAGCTCTTGACGC
TTTGTACAATCGATGCTTCCTCTGCAACTGGAATGCCTCGACTGGCTGGT
GCGGTACTGGTCACTACACCACAGGCGGTAGCAACGTCTGATGTACGGAA
GGAGGTGAATTTCTGCGTTAAGACGAGGATTCCGATGCTGGGGGTGGTGG
AGAATATGTCTGGTTATACGTGTCCGTGCTGTGGGGAGGTGACGAACCTG
TTCTCGAGTGGTGGGGGGCAGGTTCTGGCAGAAGAGATGGGTGTAAGGTT
TTTGGGAAAGGTGCCCGTTGACGTTGGATGCCTCTCGACGGGGTGAAGAA
TGTTGTGCTGACGTTGAGTCCTCTCGGGCAAAGGCGGCGTCGGCAAATCC
AGCGTAACCCTGCAACTCGCCCTCGCGCTCACCCTGCAAGGCAAATCCGT
TGGTATCCTGGACATCGATCTCACCGGCCCTTCAATCCCACGATTAGTCG
GTCTCGAAGACGCAAAAATTACCCAAGCGCCAGGCGGTTGGCTTCCTGTT
CCCGTTCACCCTTCCACCATCATCACCACACCCAATGCCTCCTCCACCTC
ACAACCAGATAATACAACAACAACGGCAACAGAAACAGAAGGTGGACGCG
CAATAAAACACGGCTCTCTCCGCTGCATGTCCCTCGGCTTCCTTTTACGT
TCCCGGTCCGATGCCGTAATCTGGCGCGGGCCCAAAAAGACAGCCATGAT
CCGCCAATTCCTCTCCGATGTGCTGTGGAATGAAACTGATTACTTGCTTA
TTGATACGCCTCCCGGAACTAGTGATGAGCATATTGCTCTTGCGGAGCAG
CTCTTGACGCTTTGTACAATCGATGCTTCCTCTGCAACTGGAATGCCTCG
ACTGGCTGGTGCGGTACTGGTCACTACACCACAGGCGGTAGCAACGTCTG
ATGTACGGAAGGAGGTGAATTTCTGCGTTAAGACGAGGATTCCGATGCTG
GGGGTGGTGGAGAATATGTCTGGTTATACGTGTCCGTGCTGTGGGGAGGT
GACGAACCTGTTCTCGAGTGGTGGGGGGCAGGTTCTGGCAGAAGAGATGG
GTGTAAGGTTTTTGGGAAAGGTGCCCGTTGACGTTGGATGCCTCTCGACG
GGGTGAAGAATGTTGTGCTGACGTTGAGTCCTCTCGGGCAAAGGCGGCGT
CGGCAAATCCAGCGTAACCCTGCAACTCGCCCTCGCGCTCACCCTGCAAG
GCAAATCCGTTGGTATCCTGGACATCGATCTCACCGGCCCTTCAATCCCA
CGATTAGTCGGTCTCGAAGACGCAAAAATTACCCAAGCGCCAGGCGGTTG
GCTTCCTGTTCCCGTTCACCCTTCCACCATCATCACCACACCCAATGCCT
CCTCCACCTCACAACCAGATAATACAACAACAACGGCAACAGAAACAGAA
GGTGGACGCGCAATAAAACACGGCTCTCTCCGCTGCATGTCCCTCGGCTT
CCTTTTACGTTCCCGGTCCGATGCCGTAATCTGGCGCGGGCCCAAAAAGA
CAGCCATGATCCGCCAATTCCTCTCCGATGTGCTGTGGAATGAAACTGAT
TACTTGCTTATTGATACGCCTCCCGGAACTAGTGATGAGCATATTGCTCT
TGCGGAGCAGCTCTTGACGCTTTGTACAATCGATGCTTCCTCTGCAACTG
GAATGCCTCGACTGGCTGGTGCGGTACTGGTCACTACACCACAGGCGGTA
GCAACGTCTGATGTACGGAAGGAGGTGAATTTCTGCGTTAAGACGAGGAT
TCCGATGCTGGGGGTGGTGGAGAATATGTCTGGTTATACGTGTCCGTGCT
GTGGGGAGGTGACGAACCTGTTCTCGAGTGGTGGGGGGCAGGTTCTGGCA
GAAGAGATGGGTGTAAGGTTTTTGGGAAAGGTGCCCGTTGACGTTGGATG
CCTCTCGACGGGGTGAAGAATGTTGTGCTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CFD1CAN33_18375Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18375-T1CAN33_18375-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18375-T1.cdsCAN33_18375-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18375-T1.exon3CAN33_18375-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_18375-T1.exon2CAN33_18375-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_18375-T1.exon1CAN33_18375-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR019591
DBxrefInterPro:IPR033756
DBxrefPFAM:PF01656
Productcytosolic Fe-S cluster assembly factor cfd1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1369766..1370950 -
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