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CAN33_18380-T1, CAN33_18380-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_18380-T1
Unique NameCAN33_18380-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1371423..1372695-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_18380-T1 ID=CAN33_18380-T1|Name=CAN33_18380-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1273bp|location=Sequence derived from alignment at NKJJ01000011.1:1371423..1372695- (Aspergillus niger FDAARGOS_311)
ATGGAGCACAACGCGGATCGTGATGAGATTGTCTCTCAATTCTGCGCCAT
GACTAGGACGGATCCTCACGAGGTACATGTTAATCATCCCAGACTGAGCT
ATGGTTGCTAACTACATACTTCATCTCAGGCGCAAGGCTATCTCGCAGCC
AACGAGTGGGACCTCGAAGCCGCAGTGACCGAATTCTTCGCCGAACAAGA
TGAAGCTTCACAGGATACTGGTGCGGCTGGTGGTGGTCGCCGACTGGGCA
CTGAATCGGAACCCTCTGCAGGCCGTTCGCTTGGTGGCAGCTCCTCTCAT
TCCCCCTCCATTACCCCGCAGCCCTCGTCCCGCAGGTCGGCCCCGAAAAA
GAAGTTTGCGACCCTGAACGACTTTGCGTCGGGTGGTGGAGAATCTTCAG
AGGAAGACGATGCAGTGAACCAGGACTTCTTCGCTGGAGGGGAGAAGTCG
GGCTTGGCTGTGCAGAACCCCGATGATATTAAGAAGAAGATCATTGAAAA
GGCCAAAAGGTGAGGTCTTTTGGATACTCTTGGTTGGTCAGGGCTGATAT
GTTTATAGGGCTCAACCTCCACCATCGGACGAACCTACCAGAAGGTCTTT
CTTCACCGGCACAGCACGTACCCTTGGTGGTGATGAGGCTCCCAGCAGGG
TAATCGAAGCCCCCAGTGCACCTGTTTCGCAGACACCGCAGCGCGTACAT
AGAACCCTACACTTCTGGTCAGATGGCTTCTCTGTTGATGACGGAGAGCT
GTTCAACTCCGACGACCCCGCCAACCGCGAAATCCTCGAGGGTATCCGCC
AGGGCCGTGCCCCGCTCTCCATCATGAATGTGCAGGCTGGCCAGGAGGTG
GACGTGGAGATCAAACAGCACGACGAGAAATACGTGAAGCCCAAGCCTAA
GTACAAGCCCTTCTCCGGGGCTGGACAGCGCCTCGGCAGCCCCACGCCTG
GTGTGAGCGCACCTGCGCCAGCAGCAGCTCCTACTCCCAGTCAGTCTACC
GAGCCAGCCAAGCCGGACGTAGATGAGTCGCAGCCGATAGTGACTCTTCA
GATCCGCCTTGGAGACGGCTCACGGCTCACTTCCCGGTTCAACACCACCC
ATACCATTGGTGACGTGTACCAGTTTGTGTCCGCTGCCAGCCTCAGTAGC
CAGTCGCGTCCCTGGGTATTGATGACTACGTTCCCCAGCAAGGATCTTTC
TGACAAGAGTGTTGTGCTGGGTGATATGGCGGAGTTTAAGCGGGGCGGCG
TGGTGGTACAGAAGTGGCAATAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:1371423..1372695-

>CAN33_18380-T1 ID=CAN33_18380-T1|Name=CAN33_18380-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3501bp|location=Sequence derived from alignment at NKJJ01000011.1:1371423..1372695- (Aspergillus niger FDAARGOS_311)
GGCTCAACCTCCACCATCGGACGAACCTACCAGAAGGTCTTTCTTCACCG
GCACAGCACGTACCCTTGGTGGTGATGAGGCTCCCAGCAGGGTAATCGAA
GCCCCCAGTGCACCTGTTTCGCAGACACCGCAGCGCGTACATAGAACCCT
ACACTTCTGGTCAGATGGCTTCTCTGTTGATGACGGAGAGCTGTTCAACT
CCGACGACCCCGCCAACCGCGAAATCCTCGAGGGTATCCGCCAGGGCCGT
GCCCCGCTCTCCATCATGAATGTGCAGGCTGGCCAGGAGGTGGACGTGGA
GATCAAACAGCACGACGAGAAATACGTGAAGCCCAAGCCTAAGTACAAGC
CCTTCTCCGGGGCTGGACAGCGCCTCGGCAGCCCCACGCCTGGTGTGAGC
GCACCTGCGCCAGCAGCAGCTCCTACTCCCAGTCAGTCTACCGAGCCAGC
CAAGCCGGACGTAGATGAGTCGCAGCCGATAGTGACTCTTCAGATCCGCC
TTGGAGACGGCTCACGGCTCACTTCCCGGTTCAACACCACCCATACCATT
GGTGACGTGTACCAGTTTGTGTCCGCTGCCAGCCTCAGTAGCCAGTCGCG
TCCCTGGGTATTGATGACTACGTTCCCCAGCAAGGATCTTTCTGACAAGA
GTGTTGTGCTGGGTGATATGGCGGAGTTTAAGCGGGGCGGCGTGGTGGTA
CAGAAGTGGCAATAAGCGCAAGGCTATCTCGCAGCCAACGAGTGGGACCT
CGAAGCCGCAGTGACCGAATTCTTCGCCGAACAAGATGAAGCTTCACAGG
ATACTGGTGCGGCTGGTGGTGGTCGCCGACTGGGCACTGAATCGGAACCC
TCTGCAGGCCGTTCGCTTGGTGGCAGCTCCTCTCATTCCCCCTCCATTAC
CCCGCAGCCCTCGTCCCGCAGGTCGGCCCCGAAAAAGAAGTTTGCGACCC
TGAACGACTTTGCGTCGGGTGGTGGAGAATCTTCAGAGGAAGACGATGCA
GTGAACCAGGACTTCTTCGCTGGAGGGGAGAAGTCGGGCTTGGCTGTGCA
GAACCCCGATGATATTAAGAAGAAGATCATTGAAAAGGCCAAAAGATGGA
GCACAACGCGGATCGTGATGAGATTGTCTCTCAATTCTGCGCCATGACTA
GGACGGATCCTCACGAGGGCTCAACCTCCACCATCGGACGAACCTACCAG
AAGGTCTTTCTTCACCGGCACAGCACGTACCCTTGGTGGTGATGAGGCTC
CCAGCAGGGTAATCGAAGCCCCCAGTGCACCTGTTTCGCAGACACCGCAG
CGCGTACATAGAACCCTACACTTCTGGTCAGATGGCTTCTCTGTTGATGA
CGGAGAGCTGTTCAACTCCGACGACCCCGCCAACCGCGAAATCCTCGAGG
GTATCCGCCAGGGCCGTGCCCCGCTCTCCATCATGAATGTGCAGGCTGGC
CAGGAGGTGGACGTGGAGATCAAACAGCACGACGAGAAATACGTGAAGCC
CAAGCCTAAGTACAAGCCCTTCTCCGGGGCTGGACAGCGCCTCGGCAGCC
CCACGCCTGGTGTGAGCGCACCTGCGCCAGCAGCAGCTCCTACTCCCAGT
CAGTCTACCGAGCCAGCCAAGCCGGACGTAGATGAGTCGCAGCCGATAGT
GACTCTTCAGATCCGCCTTGGAGACGGCTCACGGCTCACTTCCCGGTTCA
ACACCACCCATACCATTGGTGACGTGTACCAGTTTGTGTCCGCTGCCAGC
CTCAGTAGCCAGTCGCGTCCCTGGGTATTGATGACTACGTTCCCCAGCAA
GGATCTTTCTGACAAGAGTGTTGTGCTGGGTGATATGGCGGAGTTTAAGC
GGGGCGGCGTGGTGGTACAGAAGTGGCAATAAGCGCAAGGCTATCTCGCA
GCCAACGAGTGGGACCTCGAAGCCGCAGTGACCGAATTCTTCGCCGAACA
AGATGAAGCTTCACAGGATACTGGTGCGGCTGGTGGTGGTCGCCGACTGG
GCACTGAATCGGAACCCTCTGCAGGCCGTTCGCTTGGTGGCAGCTCCTCT
CATTCCCCCTCCATTACCCCGCAGCCCTCGTCCCGCAGGTCGGCCCCGAA
AAAGAAGTTTGCGACCCTGAACGACTTTGCGTCGGGTGGTGGAGAATCTT
CAGAGGAAGACGATGCAGTGAACCAGGACTTCTTCGCTGGAGGGGAGAAG
TCGGGCTTGGCTGTGCAGAACCCCGATGATATTAAGAAGAAGATCATTGA
AAAGGCCAAAAGATGGAGCACAACGCGGATCGTGATGAGATTGTCTCTCA
ATTCTGCGCCATGACTAGGACGGATCCTCACGAGGGCTCAACCTCCACCA
TCGGACGAACCTACCAGAAGGTCTTTCTTCACCGGCACAGCACGTACCCT
TGGTGGTGATGAGGCTCCCAGCAGGGTAATCGAAGCCCCCAGTGCACCTG
TTTCGCAGACACCGCAGCGCGTACATAGAACCCTACACTTCTGGTCAGAT
GGCTTCTCTGTTGATGACGGAGAGCTGTTCAACTCCGACGACCCCGCCAA
CCGCGAAATCCTCGAGGGTATCCGCCAGGGCCGTGCCCCGCTCTCCATCA
TGAATGTGCAGGCTGGCCAGGAGGTGGACGTGGAGATCAAACAGCACGAC
GAGAAATACGTGAAGCCCAAGCCTAAGTACAAGCCCTTCTCCGGGGCTGG
ACAGCGCCTCGGCAGCCCCACGCCTGGTGTGAGCGCACCTGCGCCAGCAG
CAGCTCCTACTCCCAGTCAGTCTACCGAGCCAGCCAAGCCGGACGTAGAT
GAGTCGCAGCCGATAGTGACTCTTCAGATCCGCCTTGGAGACGGCTCACG
GCTCACTTCCCGGTTCAACACCACCCATACCATTGGTGACGTGTACCAGT
TTGTGTCCGCTGCCAGCCTCAGTAGCCAGTCGCGTCCCTGGGTATTGATG
ACTACGTTCCCCAGCAAGGATCTTTCTGACAAGAGTGTTGTGCTGGGTGA
TATGGCGGAGTTTAAGCGGGGCGGCGTGGTGGTACAGAAGTGGCAATAAG
CGCAAGGCTATCTCGCAGCCAACGAGTGGGACCTCGAAGCCGCAGTGACC
GAATTCTTCGCCGAACAAGATGAAGCTTCACAGGATACTGGTGCGGCTGG
TGGTGGTCGCCGACTGGGCACTGAATCGGAACCCTCTGCAGGCCGTTCGC
TTGGTGGCAGCTCCTCTCATTCCCCCTCCATTACCCCGCAGCCCTCGTCC
CGCAGGTCGGCCCCGAAAAAGAAGTTTGCGACCCTGAACGACTTTGCGTC
GGGTGGTGGAGAATCTTCAGAGGAAGACGATGCAGTGAACCAGGACTTCT
TCGCTGGAGGGGAGAAGTCGGGCTTGGCTGTGCAGAACCCCGATGATATT
AAGAAGAAGATCATTGAAAAGGCCAAAAGATGGAGCACAACGCGGATCGT
GATGAGATTGTCTCTCAATTCTGCGCCATGACTAGGACGGATCCTCACGA
G
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
UBX1CAN33_18380Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18380-T1CAN33_18380-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18380-T1.cdsCAN33_18380-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18380-T1.exon3CAN33_18380-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_18380-T1.exon2CAN33_18380-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_18380-T1.exon1CAN33_18380-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG0926423H
DBxrefInterPro:IPR009060
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR036241
DBxrefInterPro:IPR001012
DBxrefInterPro:IPR012989
DBxrefPFAM:PF00789
DBxrefPFAM:PF14555
DBxrefPFAM:PF08059
ProductUBX domain-containing protein 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1371423..1372695 -
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