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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:1381293..1382397- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_18395-T1 ID=CAN33_18395-T1|Name=CAN33_18395-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1105bp|location=Sequence derived from alignment at NKJJ01000011.1:1381293..1382397- (Aspergillus niger FDAARGOS_311)
ATGTCCTCACCACCACCACCGTCCTCAAACCCCCTCAAACGCCCCTCCAT
CTCCTCGGCCTCCTCTCAACCACTCGGCAGCCATCCCAAGCGACCGCGCA
TGCACCCCCTCCGCCAGACCTCCTTCCCCAACACCATCGACGCAGACACG
CGCACCTACAGCGATGCCGGCAGCGTGACGGGCAGCTTTACAGGTAGCCT
GGGCGGGACCAGCGCAGATGGGGTGTTCCTAACGAAGGGAAAGAAGCGCG
GCAGGAAGAGTAAAGCGGAGAAGGAGCGCGAGAGAGAAGAAGGGAGTTTG
CGGGCGGGAATGGATCGACTGGGGTCGGTGGATGTGGATGGCGCGTCAGT
GAGGGGTGGTGCTTCTGGCGGTGCCGGAGGAGGAGGGGGAGGAGAAGATG
CAGATGAGGATGAGGATTTTGATGATGAGGGGAGTTGTTGGGGAGGGAAG
AGGGGACGACGGATACGGAGGCGGAGAAGAAGAATATGGCGTATGCATCC
CTCCTTTTGGACGACTCTATATCTGGCTTGTGGGCGAAGTTGCTAACTGG
TTCTGGTGTAGGTTGTTGGTGGATGCATTCAATCCCATCCAGTCGGAGCG
ATATGACCTGTTCAAACGAGCCAAATTACGAAAGGAGACGCTACGACGTA
TTGTCAATCATGCGCTGTCGCAGTCTGTGCCGGCTAGTGTGGTTACAACG
ATTAATGGCTTTACGAAGGTGTTTGCGGGTGAGATTATTGAGAAGGCTCG
TACCGTGCAGGCGGAGTGGGCTATCGCTCATGATCAGGCGGCTTTGGCTG
CAATTGAAGCTGAACAGGCGACGACAACAACAACGACAACCACAACACCT
GGGGGTATTAAGCAGGAGCCCATGGAAAGGAGGCCCATGTCTACGCCTAT
GGGGAAGAAGGATGTTAAGCTGCCTCCGAATCCCCATCGGGGCCAGTTGC
TGCCCTCGCATCTAAGAGAAGCGCTGCGGCGGTATAAGCGGGATGGAGAG
GGTGGAGGCGTAGGGTTCTCGGGTCTGAGTATGGGCAATCTGGGGGTGCG
AGGGTCGGTGACTTGGTCGGCGGGTAGTGTTGGCGGACGGCGCATCTTCC
GGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:1381293..1382397- >CAN33_18395-T1 ID=CAN33_18395-T1|Name=CAN33_18395-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2322bp|location=Sequence derived from alignment at NKJJ01000011.1:1381293..1382397- (Aspergillus niger FDAARGOS_311)
GAGGCCCATGTCTACGCCTATGGGGAAGAAGGATGTTAAGCTGCCTCCGA
ATCCCCATCGGGGCCAGTTGCTGCCCTCGCATCTAAGAGAAGCGCTGCGG
CGGTATAAGCGGGATGGAGAGGGTGGAGGCGTAGGGTTCTCGGGTCTGAG
TATGGGCAATCTGGGGGTGCGAGGGTCGGTGACTTGGTCGGCGGGTAGTG
TTGGCGGACGGCGCATCTTCCGGTAAGTTGTTGGTGGATGCATTCAATCC
CATCCAGTCGGAGCGATATGACCTGTTCAAACGAGCCAAATTACGAAAGG
AGACGCTACGACGTATTGTCAATCATGCGCTGTCGCAGTCTGTGCCGGCT
AGTGTGGTTACAACGATTAATGGCTTTACGAAGGTGTTTGCGGGTGAGAT
TATTGAGAAGGCTCGTACCGTGCAGGCGGAATGTCCTCACCACCACCACC
GTCCTCAAACCCCCTCAAACGCCCCTCCATCTCCTCGGCCTCCTCTCAAC
CACTCGGCAGCCATCCCAAGCGACCGCGCATGCACCCCCTCCGCCAGACC
TCCTTCCCCAACACCATCGACGCAGACACGCGCACCTACAGCGATGCCGG
CAGCGTGACGGGCAGCTTTACAGGTAGCCTGGGCGGGACCAGCGCAGATG
GGGTGTTCCTAACGAAGGGAAAGAAGCGCGGCAGGAAGAGTAAAGCGGAG
AAGGAGCGCGAGAGAGAAGAAGGGAGTTTGCGGGCGGGAATGGATCGACT
GGGGTCGGTGGATGTGGATGGCGCGAGGCCCATGTCTACGCCTATGGGGA
AGAAGGATGTTAAGCTGCCTCCGAATCCCCATCGGGGCCAGTTGCTGCCC
TCGCATCTAAGAGAAGCGCTGCGGCGGTATAAGCGGGATGGAGAGGGTGG
AGGCGTAGGGTTCTCGGGTCTGAGTATGGGCAATCTGGGGGTGCGAGGGT
CGGTGACTTGGTCGGCGGGTAGTGTTGGCGGACGGCGCATCTTCCGGTAA
GTTGTTGGTGGATGCATTCAATCCCATCCAGTCGGAGCGATATGACCTGT
TCAAACGAGCCAAATTACGAAAGGAGACGCTACGACGTATTGTCAATCAT
GCGCTGTCGCAGTCTGTGCCGGCTAGTGTGGTTACAACGATTAATGGCTT
TACGAAGGTGTTTGCGGGTGAGATTATTGAGAAGGCTCGTACCGTGCAGG
CGGAATGTCCTCACCACCACCACCGTCCTCAAACCCCCTCAAACGCCCCT
CCATCTCCTCGGCCTCCTCTCAACCACTCGGCAGCCATCCCAAGCGACCG
CGCATGCACCCCCTCCGCCAGACCTCCTTCCCCAACACCATCGACGCAGA
CACGCGCACCTACAGCGATGCCGGCAGCGTGACGGGCAGCTTTACAGGTA
GCCTGGGCGGGACCAGCGCAGATGGGGTGTTCCTAACGAAGGGAAAGAAG
CGCGGCAGGAAGAGTAAAGCGGAGAAGGAGCGCGAGAGAGAAGAAGGGAG
TTTGCGGGCGGGAATGGATCGACTGGGGTCGGTGGATGTGGATGGCGCGA
GGCCCATGTCTACGCCTATGGGGAAGAAGGATGTTAAGCTGCCTCCGAAT
CCCCATCGGGGCCAGTTGCTGCCCTCGCATCTAAGAGAAGCGCTGCGGCG
GTATAAGCGGGATGGAGAGGGTGGAGGCGTAGGGTTCTCGGGTCTGAGTA
TGGGCAATCTGGGGGTGCGAGGGTCGGTGACTTGGTCGGCGGGTAGTGTT
GGCGGACGGCGCATCTTCCGGTAAGTTGTTGGTGGATGCATTCAATCCCA
TCCAGTCGGAGCGATATGACCTGTTCAAACGAGCCAAATTACGAAAGGAG
ACGCTACGACGTATTGTCAATCATGCGCTGTCGCAGTCTGTGCCGGCTAG
TGTGGTTACAACGATTAATGGCTTTACGAAGGTGTTTGCGGGTGAGATTA
TTGAGAAGGCTCGTACCGTGCAGGCGGAATGTCCTCACCACCACCACCGT
CCTCAAACCCCCTCAAACGCCCCTCCATCTCCTCGGCCTCCTCTCAACCA
CTCGGCAGCCATCCCAAGCGACCGCGCATGCACCCCCTCCGCCAGACCTC
CTTCCCCAACACCATCGACGCAGACACGCGCACCTACAGCGATGCCGGCA
GCGTGACGGGCAGCTTTACAGGTAGCCTGGGCGGGACCAGCGCAGATGGG
GTGTTCCTAACGAAGGGAAAGAAGCGCGGCAGGAAGAGTAAAGCGGAGAA
GGAGCGCGAGAGAGAAGAAGGGAGTTTGCGGGCGGGAATGGATCGACTGG
GGTCGGTGGATGTGGATGGCGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006367 | transcription initiation from RNA polymerase II promoter |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046982 | protein heterodimerization activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000111.9 |
| Note | BUSCO:EOG09264VRO |
| DBxref | InterPro:IPR006809 |
| DBxref | InterPro:IPR009072 |
| DBxref | PFAM:PF04719 |
| Product | hTAFII28-like protein conserved region family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:1381293..1382397 - |
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