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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:1124974..1127002+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_1840-T1 ID=CAN33_1840-T1|Name=CAN33_1840-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2029bp|location=Sequence derived from alignment at NKJJ01000004.1:1124974..1127002+ (Aspergillus niger FDAARGOS_311)
ATGCGCCCGGAGCACCCTTCAAGAAGCAGGTCAAGATCTCCATCTTCCTC
CTTTGGAAAGACATCCCAAGACTACCCGTTGGCAGTCTTTGATCCGAATG
AGAATGACTCCGAAAGCAGTCAGTTCATAACGGTTGGGCGGGAAAGTACC
GACTCCGCCCGGCCCGATCGGCGAGAGAACACGAATGAGCCTTTATTGCC
AACTTCAACTCATCATCCCCGTCGCATAGCGGCGGCGAGGCCATTTACAT
GTACGCTTTCTGGGATTCGCGCGTGGATTAAAGGCCCGCCACATCCACAC
CGGTATCAGATCACTCCATGGTTGCAGCGCTGGCAGACGGCACCGGGCCG
CCTTGTGGAGCGCTATTTTCCGAGCACTCGTGCCAAAGTTTGGCTTTTGT
TGGCCTGCATATGCACCTGGGGTGTCATATTTCTCTCCATCCTGCATTCC
TCTGTAGCTGGCCAGCAGGTATCCGGATACGGAGTGCCTGTCAAGCTATC
GTGTAACGCTAGACTATGGTATGTGACCTGTGCTCTGGCGGTTCCAAACT
GTTCCCAAATTAATCTCTTTATGCAGGCCAAACTCGACCGACTGCGGTCT
GAATGGTGACTCCTGTCGCCCTTTTGACGACGGGGCATTTGCCTTTCGCT
GTCCCGCAAGTTGCGCAGATGCGATGCTGCTAGAGCCGTATTTTGTAGGC
CCCGAGGAGTACAACTATCGTCCTCTTGTCATCGGGGGCACTGCAGAAGG
TGATAGTACTGAGGGTATCTACCGCGGAGACTCAGCCATCTGTCCTGCGG
CACTACACGCTGGTCTGATAGATAGCCAAAAAGGCGGCTGTGGTGTCTTG
CGTCGAACGGGTGAAAGAACCAATTTTCCATCAGCGGCAAGTAACGGCAT
CGAAAGCATTGGATACGCTTCATACTTCCCACTCTCCTTCACCTTTAGCG
GAGAGCCATCTGAAACAAGCTGCCAGGACCTCCGCTGGCCACTTTTCACC
TTCTCAGTCGTTGTAACAACCCTGCTATCCCTATTTATCACGTCTCCCGC
AGCATTCTATGCCTCTATCTACTTCATCGTCTACTTCCAGGTCGCTCTCT
CCTCCGACCCGCCTTACTCCCCAGACTACTATGAAGTCGTATCTACAGCC
CTAGGCCGCTTCCTCCCCTGCGCCTTCGTCGGCTTTGCAATTTACTACTT
TTGCGTCCGCAAAACTCTAACAGACCTCACCGCACACTGGGACAAGACCG
TCCTCTGGCTCGGCAGCTGCTGGGTCGGCGCCCTCAACACCGACACATTC
GACAAAATTCCCATCTCACGCCTCACACCTCACGACATCCAACAACAACC
AGGCGCCATCCCCGCCTTGATCATCATCATTGGCCTCCTCGTCGCCATTG
TTCTCACCCAAGCCATCGCTTTCCGCAGAGAAGGCCGCATGCCCAAAATG
CTTCTCCTCTATGGAATCATGGCCTGCGGCGTGATCGCCCTGATGCTCGT
CCCGCACATGAACCTTCGCATTCATCACTACGTCCTCAGCCTCCTCTTCT
TACCGGGGACAACACTCCAAACGCGCCCCAGTCTCCTATACCAAGGCCTC
CTGGTAGGACTGTTCATCAACGGCATCGCCCGCTGGGGCTTCGATAGCAT
TCTGCAGACGTCTGCTGCATTGCTTGACGGCGCGCAGCTGGGCAGCGTCC
TGCCTGTCATTGGGGCTCCTGTTATGATGTCACGTCAGAACATCATGTTC
AATTTCAATGATGTAGACAAAGATGCAGATGGGATTAGCGTGCTTGTTAA
TGATGTCGAACGCTTCCGGGCGTTCAAGTCTGATGATGGGATGTTGGAGT
CGTTTAATTGGACCCGCCATTTGGAAGGTGAGCCGGAGTATTTCCGGTTT
GGGTACATTAAAGTTAATGCGTTGGGAGGAATTTGGTATGAGGATTTTAC
GAGGCCGGGGACTTGGGAAGGTGAGGGACAGTGGATTCCTCTTGACTCTG
ATTCTCGGTCGTCTATGGAATCTATCTAG back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:1124974..1127002+ >CAN33_1840-T1 ID=CAN33_1840-T1|Name=CAN33_1840-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3942bp|location=Sequence derived from alignment at NKJJ01000004.1:1124974..1127002+ (Aspergillus niger FDAARGOS_311)
ATGCGCCCGGAGCACCCTTCAAGAAGCAGGTCAAGATCTCCATCTTCCTC
CTTTGGAAAGACATCCCAAGACTACCCGTTGGCAGTCTTTGATCCGAATG
AGAATGACTCCGAAAGCAGTCAGTTCATAACGGTTGGGCGGGAAAGTACC
GACTCCGCCCGGCCCGATCGGCGAGAGAACACGAATGAGCCTTTATTGCC
AACTTCAACTCATCATCCCCGTCGCATAGCGGCGGCGAGGCCATTTACAT
GTACGCTTTCTGGGATTCGCGCGTGGATTAAAGGCCCGCCACATCCACAC
CGGTATCAGATCACTCCATGGTTGCAGCGCTGGCAGACGGCACCGGGCCG
CCTTGTGGAGCGCTATTTTCCGAGCACTCGTGCCAAAGTTTGGCTTTTGT
TGGCCTGCATATGCACCTGGGGTGTCATATTTCTCTCCATCCTGCATTCC
TCTGTAGCTGGCCAGCAGGTATCCGGATACGGAGTGCCTGTCAAGCTATC
GTGTAACGCTAGACTATGGCCAAACTCGACCGACTGCGGTCTGAATGGTG
ACTCCTGTCGCCCTTTTGACGACGGGGCATTTGCCTTTCGCTGTCCCGCA
AGTTGCGCAGATGCGATGCTGCTAGAGCCGTATTTTGTAGGCCCCGAGGA
GTACAACTATCGTCCTCTTGTCATCGGGGGCACTGCAGAAGGTGATAGTA
CTGAGGGTATCTACCGCGGAGACTCAGCCATCTGTCCTGCGGCACTACAC
GCTGGTCTGATAGATAGCCAAAAAGGCGGCTGTGGTGTCTTGCGTCGAAC
GGGTGAAAGAACCAATTTTCCATCAGCGGCAAGTAACGGCATCGAAAGCA
TTGGATACGCTTCATACTTCCCACTCTCCTTCACCTTTAGCGGAGAGCCA
TCTGAAACAAGCTGCCAGGACCTCCGCTGGCCACTTTTCACCTTCTCAGT
CGTTGTAACAACCCTGCTATCCCTATTTATCACGTCTCCCGCAGCATTCT
ATGCCTCTATCTACTTCATCGTCTACTTCCAGGTCGCTCTCTCCTCCGAC
CCGCCTTACTCCCCAGACTACTATGAAGTCGTATCTACAGCCCTAGGCCG
CTTCCTCCCCTGCGCCTTCGTCGGCTTTGCAATTTACTACTTTTGCGTCC
GCAAAACTCTAACAGACCTCACCGCACACTGGGACAAGACCGTCCTCTGG
CTCGGCAGCTGCTGGGTCGGCGCCCTCAACACCGACACATTCGACAAAAT
TCCCATCTCACGCCTCACACCTCACGACATCCAACAACAACCAGGCGCCA
TCCCCGCCTTGATCATCATCATTGGCCTCCTCGTCGCCATTGTTCTCACC
CAAGCCATCGCTTTCCGCAGAGAAGGCCGCATGCCCAAAATGCTTCTCCT
CTATGGAATCATGGCCTGCGGCGTGATCGCCCTGATGCTCGTCCCGCACA
TGAACCTTCGCATTCATCACTACGTCCTCAGCCTCCTCTTCTTACCGGGG
ACAACACTCCAAACGCGCCCCAGTCTCCTATACCAAGGCCTCCTGGTAGG
ACTGTTCATCAACGGCATCGCCCGCTGGGGCTTCGATAGCATTCTGCAGA
CGTCTGCTGCATTGCTTGACGGCGCGCAGCTGGGCAGCGTCCTGCCTGTC
ATTGGGGCTCCTGTTATGATGTCACGTCAGAACATCATGTTCAATTTCAA
TGATGTAGACAAAGATGCAGATGGGATTAGCGTGCTTGTTAATGATGTCG
AACGCTTCCGGGCGTTCAAGTCTGATGATGGGATGTTGGAGTCGTTTAAT
TGGACCCGCCATTTGGAAGGTGAGCCGGAGTATTTCCGGTTTGGGTACAT
TAAAGTTAATGCGTTGGGAGGAATTTGGTATGAGGATTTTACGAGGCCGG
GGACTTGGGAAGGTGAGGGACAGTGGATTCCTCTTGACTCTGATTCTCGG
TCGTCTATGGAATCTATCTAGATGCGCCCGGAGCACCCTTCAAGAAGCAG
GTCAAGATCTCCATCTTCCTCCTTTGGAAAGACATCCCAAGACTACCCGT
TGGCAGTCTTTGATCCGAATGAGAATGACTCCGAAAGCAGTCAGTTCATA
ACGGTTGGGCGGGAAAGTACCGACTCCGCCCGGCCCGATCGGCGAGAGAA
CACGAATGAGCCTTTATTGCCAACTTCAACTCATCATCCCCGTCGCATAG
CGGCGGCGAGGCCATTTACATGTACGCTTTCTGGGATTCGCGCGTGGATT
AAAGGCCCGCCACATCCACACCGGTATCAGATCACTCCATGGTTGCAGCG
CTGGCAGACGGCACCGGGCCGCCTTGTGGAGCGCTATTTTCCGAGCACTC
GTGCCAAAGTTTGGCTTTTGTTGGCCTGCATATGCACCTGGGGTGTCATA
TTTCTCTCCATCCTGCATTCCTCTGTAGCTGGCCAGCAGGTATCCGGATA
CGGAGTGCCTGTCAAGCTATCGTGTAACGCTAGACTATGGCCAAACTCGA
CCGACTGCGGTCTGAATGGTGACTCCTGTCGCCCTTTTGACGACGGGGCA
TTTGCCTTTCGCTGTCCCGCAAGTTGCGCAGATGCGATGCTGCTAGAGCC
GTATTTTGTAGGCCCCGAGGAGTACAACTATCGTCCTCTTGTCATCGGGG
GCACTGCAGAAGGTGATAGTACTGAGGGTATCTACCGCGGAGACTCAGCC
ATCTGTCCTGCGGCACTACACGCTGGTCTGATAGATAGCCAAAAAGGCGG
CTGTGGTGTCTTGCGTCGAACGGGTGAAAGAACCAATTTTCCATCAGCGG
CAAGTAACGGCATCGAAAGCATTGGATACGCTTCATACTTCCCACTCTCC
TTCACCTTTAGCGGAGAGCCATCTGAAACAAGCTGCCAGGACCTCCGCTG
GCCACTTTTCACCTTCTCAGTCGTTGTAACAACCCTGCTATCCCTATTTA
TCACGTCTCCCGCAGCATTCTATGCCTCTATCTACTTCATCGTCTACTTC
CAGGTCGCTCTCTCCTCCGACCCGCCTTACTCCCCAGACTACTATGAAGT
CGTATCTACAGCCCTAGGCCGCTTCCTCCCCTGCGCCTTCGTCGGCTTTG
CAATTTACTACTTTTGCGTCCGCAAAACTCTAACAGACCTCACCGCACAC
TGGGACAAGACCGTCCTCTGGCTCGGCAGCTGCTGGGTCGGCGCCCTCAA
CACCGACACATTCGACAAAATTCCCATCTCACGCCTCACACCTCACGACA
TCCAACAACAACCAGGCGCCATCCCCGCCTTGATCATCATCATTGGCCTC
CTCGTCGCCATTGTTCTCACCCAAGCCATCGCTTTCCGCAGAGAAGGCCG
CATGCCCAAAATGCTTCTCCTCTATGGAATCATGGCCTGCGGCGTGATCG
CCCTGATGCTCGTCCCGCACATGAACCTTCGCATTCATCACTACGTCCTC
AGCCTCCTCTTCTTACCGGGGACAACACTCCAAACGCGCCCCAGTCTCCT
ATACCAAGGCCTCCTGGTAGGACTGTTCATCAACGGCATCGCCCGCTGGG
GCTTCGATAGCATTCTGCAGACGTCTGCTGCATTGCTTGACGGCGCGCAG
CTGGGCAGCGTCCTGCCTGTCATTGGGGCTCCTGTTATGATGTCACGTCA
GAACATCATGTTCAATTTCAATGATGTAGACAAAGATGCAGATGGGATTA
GCGTGCTTGTTAATGATGTCGAACGCTTCCGGGCGTTCAAGTCTGATGAT
GGGATGTTGGAGTCGTTTAATTGGACCCGCCATTTGGAAGGTGAGCCGGA
GTATTTCCGGTTTGGGTACATTAAAGTTAATGCGTTGGGAGGAATTTGGT
ATGAGGATTTTACGAGGCCGGGGACTTGGGAAGGTGAGGGACAGTGGATT
CCTCTTGACTCTGATTCTCGGTCGTCTATGGAATCTATCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
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| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036609 |
| DBxref | InterPro:IPR004043 |
| DBxref | PFAM:PF03815 |
| Product | LCCL domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:1124974..1127002 + |
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